RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 KRT13P13646 458 aa19.61■□□□□ 0.73
SORT1-203ENST00000471996 LCP1P13796 627 aa19.61■□□□□ 0.73
SORT1-203ENST00000471996 TGM2P21980 687 aa19.61■□□□□ 0.73
SORT1-203ENST00000471996 CNTN1Q12860 1018 aa19.61■□□□□ 0.73
SORT1-203ENST00000471996 CLN3Q13286 438 aa19.61■□□□□ 0.73
SORT1-203ENST00000471996 KRT39Q6A163 491 aa19.61■□□□□ 0.73
SORT1-203ENST00000471996 DSG4Q86SJ6 1040 aa19.61■□□□□ 0.73
SORT1-203ENST00000471996 UBA3Q8TBC4 463 aa19.61■□□□□ 0.73
SORT1-203ENST00000471996 FRS2Q8WU20 508 aa19.61■□□□□ 0.73
SORT1-203ENST00000471996 ATXN7L3BQ96GX2 97 aa19.61■□□□□ 0.73
SORT1-203ENST00000471996 FCRL2Q96LA5 508 aaPredicted RBP19.61■□□□□ 0.73
SORT1-203ENST00000471996 DUSP23Q9BVJ7 150 aa19.61■□□□□ 0.73
SORT1-203ENST00000471996 PREBQ9HCU5 417 aa19.61■□□□□ 0.73
SORT1-203ENST00000471996 ENTPD2Q9Y5L3 495 aa19.61■□□□□ 0.73
SORT1-203ENST00000471996 K7ESM1 405 aa19.6■□□□□ 0.73
SORT1-203ENST00000471996 SLC31A1O15431 190 aa19.6■□□□□ 0.73
SORT1-203ENST00000471996 NTRK1P04629 796 aa19.6■□□□□ 0.73
SORT1-203ENST00000471996 GTF2H1P32780 548 aa19.6■□□□□ 0.73
SORT1-203ENST00000471996 ZSCAN23Q3MJ62 389 aa19.6■□□□□ 0.73
SORT1-203ENST00000471996 C6orf132Q5T0Z8 1188 aa19.6■□□□□ 0.73
SORT1-203ENST00000471996 XKR5Q6UX68 686 aa19.6■□□□□ 0.73
SORT1-203ENST00000471996 ATG14Q6ZNE5 492 aa19.6■□□□□ 0.73
SORT1-203ENST00000471996 FAM186BQ8IYM0 893 aa19.6■□□□□ 0.73
SORT1-203ENST00000471996 OR8D1Q8WZ84 308 aa19.6■□□□□ 0.73
SORT1-203ENST00000471996 IRGQQ8WZA9 623 aa19.6■□□□□ 0.73
SORT1-203ENST00000471996 MYOCQ99972 504 aa19.6■□□□□ 0.73
SORT1-203ENST00000471996 PPM1HQ9ULR3 514 aa19.6■□□□□ 0.73
SORT1-203ENST00000471996 UBR5O95071 2799 aaPredicted RBP19.6■□□□□ 0.73
SORT1-203ENST00000471996 SETSIPP0DME0 302 aa19.59■□□□□ 0.73
SORT1-203ENST00000471996 PRLRP16471 622 aa19.59■□□□□ 0.73
SORT1-203ENST00000471996 NR2F2P24468 414 aa19.59■□□□□ 0.73
SORT1-203ENST00000471996 NFIL3Q16649 462 aa19.59■□□□□ 0.73
SORT1-203ENST00000471996 LINC00303Q3SY05 128 aa19.59■□□□□ 0.73
SORT1-203ENST00000471996 ERICH6BQ5W0A0 696 aa19.59■□□□□ 0.73
SORT1-203ENST00000471996 CLEC14AQ86T13 490 aa19.59■□□□□ 0.73
SORT1-203ENST00000471996 ARL14Q8N4G2 192 aa19.59■□□□□ 0.73
SORT1-203ENST00000471996 OR13H1Q8NG92 308 aa19.59■□□□□ 0.73
SORT1-203ENST00000471996 IFT43Q96FT9 208 aa19.59■□□□□ 0.73
SORT1-203ENST00000471996 CCNL2Q96S94 520 aaPredicted RBP19.59■□□□□ 0.73
SORT1-203ENST00000471996 CALN1Q9BXU9 219 aa19.59■□□□□ 0.73
SORT1-203ENST00000471996 STARD5Q9NSY2 213 aa19.59■□□□□ 0.73
SORT1-203ENST00000471996 RAB20Q9NX57 234 aa19.59■□□□□ 0.73
SORT1-203ENST00000471996 EFSO43281 561 aa19.58■□□□□ 0.72
SORT1-203ENST00000471996 GABBR2O75899 941 aa19.58■□□□□ 0.72
SORT1-203ENST00000471996 YEATS4O95619 227 aa19.58■□□□□ 0.72
SORT1-203ENST00000471996 LTFP02788 710 aa19.58■□□□□ 0.72
SORT1-203ENST00000471996 CD19P15391 556 aa19.58■□□□□ 0.72
SORT1-203ENST00000471996 MLLT3P42568 568 aaPredicted RBP19.58■□□□□ 0.72
SORT1-203ENST00000471996 TAS2R38P59533 333 aa19.58■□□□□ 0.72
SORT1-203ENST00000471996 SULT2A1Q06520 285 aa19.58■□□□□ 0.72
SORT1-203ENST00000471996 SLC12A1Q13621 1099 aa19.58■□□□□ 0.72
SORT1-203ENST00000471996 ZNF574Q6ZN55 896 aaPredicted RBP19.58■□□□□ 0.72
SORT1-203ENST00000471996 FBXL13Q8NEE6 735 aa19.58■□□□□ 0.72
SORT1-203ENST00000471996 SLC39A13Q96H72 371 aa19.58■□□□□ 0.72
SORT1-203ENST00000471996 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.58■□□□□ 0.72
SORT1-203ENST00000471996 TLR6Q9Y2C9 796 aa19.58■□□□□ 0.72
SORT1-203ENST00000471996 A0A1W2PQU0 124 aa19.57■□□□□ 0.72
SORT1-203ENST00000471996 PMS2P1A4D2B8 440 aa19.57■□□□□ 0.72
SORT1-203ENST00000471996 C1QTNF3-AMACRE9PGA6 284 aa19.57■□□□□ 0.72
SORT1-203ENST00000471996 O00370 1275 aa19.57■□□□□ 0.72
SORT1-203ENST00000471996 SUV39H1O43463 412 aa19.57■□□□□ 0.72
SORT1-203ENST00000471996 NEBLO76041 1014 aa19.57■□□□□ 0.72
SORT1-203ENST00000471996 AKT2P31751 481 aa19.57■□□□□ 0.72
SORT1-203ENST00000471996 PSMC2P35998 433 aaKnown RBP19.57■□□□□ 0.72
SORT1-203ENST00000471996 VASPP50552 380 aaPredicted RBP19.57■□□□□ 0.72
SORT1-203ENST00000471996 MCCD1P59942 119 aaPredicted RBP19.57■□□□□ 0.72
SORT1-203ENST00000471996 NFKB2Q00653 900 aa19.57■□□□□ 0.72
SORT1-203ENST00000471996 NNTQ13423 1086 aa19.57■□□□□ 0.72
SORT1-203ENST00000471996 CDKN3Q16667 212 aa19.57■□□□□ 0.72
SORT1-203ENST00000471996 ZCCHC8Q6NZY4 707 aaKnown RBP19.57■□□□□ 0.72
SORT1-203ENST00000471996 NEK5Q6P3R8 708 aa19.57■□□□□ 0.72
SORT1-203ENST00000471996 RBM44Q6ZP01 1051 aaKnown RBP19.57■□□□□ 0.72
SORT1-203ENST00000471996 CEP57L1Q8IYX8 460 aa19.57■□□□□ 0.72
SORT1-203ENST00000471996 LGI2Q8N0V4 545 aa19.57■□□□□ 0.72
SORT1-203ENST00000471996 SLC22A18ASQ8N1D0 253 aa19.57■□□□□ 0.72
SORT1-203ENST00000471996 TPCN2Q8NHX9 752 aa19.57■□□□□ 0.72
SORT1-203ENST00000471996 SLC35F5Q8WV83 523 aa19.57■□□□□ 0.72
SORT1-203ENST00000471996 KLK6Q92876 244 aa19.57■□□□□ 0.72
SORT1-203ENST00000471996 ZNF396Q96N95 335 aaPredicted RBP19.57■□□□□ 0.72
SORT1-203ENST00000471996 SERPINB11Q96P15 392 aa19.57■□□□□ 0.72
SORT1-203ENST00000471996 NOX5Q96PH1 765 aa19.57■□□□□ 0.72
SORT1-203ENST00000471996 FZD3Q9NPG1 666 aa19.57■□□□□ 0.72
SORT1-203ENST00000471996 FAM13BQ9NYF5 915 aa19.57■□□□□ 0.72
SORT1-203ENST00000471996 ATXN7L1Q9ULK2 861 aaPredicted RBP19.57■□□□□ 0.72
SORT1-203ENST00000471996 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.56■□□□□ 0.72
SORT1-203ENST00000471996 PIK3R2O00459 728 aa19.56■□□□□ 0.72
SORT1-203ENST00000471996 ALOX15BO15296 676 aa19.56■□□□□ 0.72
SORT1-203ENST00000471996 TNFSF15O95150 251 aa19.56■□□□□ 0.72
SORT1-203ENST00000471996 MOCS2O96007 188 aaPredicted RBP19.56■□□□□ 0.72
SORT1-203ENST00000471996 CENPBP07199 599 aaPredicted RBP19.56■□□□□ 0.72
SORT1-203ENST00000471996 VDRP11473 427 aa19.56■□□□□ 0.72
SORT1-203ENST00000471996 ITGB6P18564 788 aa19.56■□□□□ 0.72
SORT1-203ENST00000471996 HNRNPA2B1P22626 353 aaKnown RBP19.56■□□□□ 0.72
SORT1-203ENST00000471996 NUMBP49757 651 aa19.56■□□□□ 0.72
SORT1-203ENST00000471996 RGS7P49802 495 aa19.56■□□□□ 0.72
SORT1-203ENST00000471996 MXI1P50539 228 aa19.56■□□□□ 0.72
SORT1-203ENST00000471996 HNRNPKP61978 463 aaKnown RBP eCLIP19.56■□□□□ 0.72
SORT1-203ENST00000471996 ZNF177Q13360 481 aaPredicted RBP19.56■□□□□ 0.72
SORT1-203ENST00000471996 ZNF284Q2VY69 593 aa19.56■□□□□ 0.72
SORT1-203ENST00000471996 ZNF542PQ5EBM4 170 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms