RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 SNAP91O60641 907 aa10.13□□□□□ -0.79
SF3A1-207ENST00000471342 PRAMEF11O60813 436 aa10.13□□□□□ -0.79
SF3A1-207ENST00000471342 TULP3O75386 442 aa10.13□□□□□ -0.79
SF3A1-207ENST00000471342 GJB3O75712 270 aa10.13□□□□□ -0.79
SF3A1-207ENST00000471342 URI1O94763 535 aaPredicted RBP10.13□□□□□ -0.79
SF3A1-207ENST00000471342 MMP2P08253 660 aa10.13□□□□□ -0.79
SF3A1-207ENST00000471342 ZSCAN5DPP0CG00 497 aa10.13□□□□□ -0.79
SF3A1-207ENST00000471342 CR2P20023 1033 aa10.13□□□□□ -0.79
SF3A1-207ENST00000471342 TGM2P21980 687 aa10.13□□□□□ -0.79
SF3A1-207ENST00000471342 RBL1P28749 1068 aa10.13□□□□□ -0.79
SF3A1-207ENST00000471342 GDI1P31150 447 aa10.13□□□□□ -0.79
SF3A1-207ENST00000471342 COILP38432 576 aaPredicted RBP10.13□□□□□ -0.79
SF3A1-207ENST00000471342 ARL4AP40617 200 aa10.13□□□□□ -0.79
SF3A1-207ENST00000471342 RGRP47804 291 aa10.13□□□□□ -0.79
SF3A1-207ENST00000471342 GNA12Q03113 381 aa10.13□□□□□ -0.79
SF3A1-207ENST00000471342 PPIDQ08752 370 aaKnown RBP10.13□□□□□ -0.79
SF3A1-207ENST00000471342 ZBTB17Q13105 803 aa10.13□□□□□ -0.79
SF3A1-207ENST00000471342 ENPP2Q13822 863 aa10.13□□□□□ -0.79
SF3A1-207ENST00000471342 KRT81Q14533 505 aa10.13□□□□□ -0.79
SF3A1-207ENST00000471342 WHAMMP3Q1A5X7 153 aa10.13□□□□□ -0.79
SF3A1-207ENST00000471342 LONRF2Q1L5Z9 754 aa10.13□□□□□ -0.79
SF3A1-207ENST00000471342 PUS10Q3MIT2 529 aaKnown RBP10.13□□□□□ -0.79
SF3A1-207ENST00000471342 C2orf27AQ580R0 203 aa10.13□□□□□ -0.79
SF3A1-207ENST00000471342 RWDD4Q6NW29 188 aaKnown RBP10.13□□□□□ -0.79
SF3A1-207ENST00000471342 SETD3Q86TU7 594 aaPredicted RBP10.13□□□□□ -0.79
SF3A1-207ENST00000471342 RFX6Q8HWS3 928 aa10.13□□□□□ -0.79
SF3A1-207ENST00000471342 MAP7D3Q8IWC1 876 aa10.13□□□□□ -0.79
SF3A1-207ENST00000471342 HJURPQ8NCD3 748 aaPredicted RBP10.13□□□□□ -0.79
SF3A1-207ENST00000471342 TTC8Q8TAM2 541 aa10.13□□□□□ -0.79
SF3A1-207ENST00000471342 ZNF592Q92610 1267 aa10.13□□□□□ -0.79
SF3A1-207ENST00000471342 HDAC11Q96DB2 347 aa10.13□□□□□ -0.79
SF3A1-207ENST00000471342 QKIQ96PU8 341 aaKnown RBP eCLIP10.13□□□□□ -0.79
SF3A1-207ENST00000471342 ASB2Q96Q27 587 aa10.13□□□□□ -0.79
SF3A1-207ENST00000471342 IL12RB2Q99665 862 aa10.13□□□□□ -0.79
SF3A1-207ENST00000471342 TRMT61BQ9BVS5 477 aaKnown RBP10.13□□□□□ -0.79
SF3A1-207ENST00000471342 CARD6Q9BX69 1037 aa10.13□□□□□ -0.79
SF3A1-207ENST00000471342 DDX47Q9H0S4 455 aaKnown RBP10.13□□□□□ -0.79
SF3A1-207ENST00000471342 STIM2Q9P246 746 aa10.13□□□□□ -0.79
SF3A1-207ENST00000471342 RNF14Q9UBS8 474 aa10.13□□□□□ -0.79
SF3A1-207ENST00000471342 PCYOX1Q9UHG3 505 aa10.13□□□□□ -0.79
SF3A1-207ENST00000471342 SLC12A6Q9UHW9 1150 aa10.13□□□□□ -0.79
SF3A1-207ENST00000471342 LSM7Q9UK45 103 aaKnown RBP10.13□□□□□ -0.79
SF3A1-207ENST00000471342 DRG1Q9Y295 367 aaKnown RBP10.13□□□□□ -0.79
SF3A1-207ENST00000471342 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.13□□□□□ -0.79
SF3A1-207ENST00000471342 MYOFQ9NZM1 2061 aa10.13□□□□□ -0.79
SF3A1-207ENST00000471342 MUC22E2RYF6 1773 aaPredicted RBP10.12□□□□□ -0.79
SF3A1-207ENST00000471342 KRBA1A5PL33 1030 aa10.12□□□□□ -0.79
SF3A1-207ENST00000471342 NEDD8-MDP1E9PL57 170 aa10.12□□□□□ -0.79
SF3A1-207ENST00000471342 K7EQS6 105 aa10.12□□□□□ -0.79
SF3A1-207ENST00000471342 PGRMC1O00264 195 aaKnown RBP10.12□□□□□ -0.79
SF3A1-207ENST00000471342 SMAD6O43541 496 aaKnown RBP10.12□□□□□ -0.79
SF3A1-207ENST00000471342 KDELR3O43731 214 aa10.12□□□□□ -0.79
SF3A1-207ENST00000471342 ADH5P11766 374 aa10.12□□□□□ -0.79
SF3A1-207ENST00000471342 ETS1P14921 441 aa10.12□□□□□ -0.79
SF3A1-207ENST00000471342 KIR2DL1P43626 348 aaPredicted RBP10.12□□□□□ -0.79
SF3A1-207ENST00000471342 NR2C2P49116 596 aa10.12□□□□□ -0.79
SF3A1-207ENST00000471342 VASPP50552 380 aaPredicted RBP10.12□□□□□ -0.79
SF3A1-207ENST00000471342 GALK1P51570 392 aa10.12□□□□□ -0.79
SF3A1-207ENST00000471342 YBEYP58557 167 aaPredicted RBP10.12□□□□□ -0.79
SF3A1-207ENST00000471342 C2orf54Q08AI8 447 aa10.12□□□□□ -0.79
SF3A1-207ENST00000471342 MSLNQ13421 630 aaPredicted RBP10.12□□□□□ -0.79
SF3A1-207ENST00000471342 XRCC4Q13426 336 aa10.12□□□□□ -0.79
SF3A1-207ENST00000471342 PLEKHG6Q3KR16 790 aa10.12□□□□□ -0.79
SF3A1-207ENST00000471342 DGKKQ5KSL6 1271 aa10.12□□□□□ -0.79
SF3A1-207ENST00000471342 TTC39BQ5VTQ0 682 aaPredicted RBP10.12□□□□□ -0.79
SF3A1-207ENST00000471342 RNF219Q5W0B1 726 aaPredicted RBP10.12□□□□□ -0.79
SF3A1-207ENST00000471342 FSTL4Q6MZW2 842 aa10.12□□□□□ -0.79
SF3A1-207ENST00000471342 TMCO3Q6UWJ1 677 aa10.12□□□□□ -0.79
SF3A1-207ENST00000471342 MTSS1LQ765P7 747 aa10.12□□□□□ -0.79
SF3A1-207ENST00000471342 PLCD3Q8N3E9 789 aa10.12□□□□□ -0.79
SF3A1-207ENST00000471342 MMGT1Q8N4V1 131 aa10.12□□□□□ -0.79
SF3A1-207ENST00000471342 ALLCQ8N6M5 410 aa10.12□□□□□ -0.79
SF3A1-207ENST00000471342 NAT16Q8N8M0 369 aa10.12□□□□□ -0.79
SF3A1-207ENST00000471342 FRS2Q8WU20 508 aa10.12□□□□□ -0.79
SF3A1-207ENST00000471342 ATXN2LQ8WWM7 1075 aaKnown RBP10.12□□□□□ -0.79
SF3A1-207ENST00000471342 SORCS1Q8WY21 1168 aa10.12□□□□□ -0.79
SF3A1-207ENST00000471342 SEC14L1Q92503 715 aa10.12□□□□□ -0.79
SF3A1-207ENST00000471342 NECAB3Q96P71 396 aaPredicted RBP10.12□□□□□ -0.79
SF3A1-207ENST00000471342 BBS2Q9BXC9 721 aa10.12□□□□□ -0.79
SF3A1-207ENST00000471342 SLC2A11Q9BYW1 496 aa10.12□□□□□ -0.79
SF3A1-207ENST00000471342 MAGEH1Q9H213 219 aa10.12□□□□□ -0.79
SF3A1-207ENST00000471342 ABCB8Q9NUT2 735 aa10.12□□□□□ -0.79
SF3A1-207ENST00000471342 IGSF9Q9P2J2 1179 aa10.12□□□□□ -0.79
SF3A1-207ENST00000471342 THEGQ9P2T0 379 aa10.12□□□□□ -0.79
SF3A1-207ENST00000471342 PRKAG3Q9UGI9 489 aa10.12□□□□□ -0.79
SF3A1-207ENST00000471342 VPS51Q9UID3 782 aa10.12□□□□□ -0.79
SF3A1-207ENST00000471342 NYNRINQ9P2P1 1898 aaKnown RBP10.12□□□□□ -0.79
SF3A1-207ENST00000471342 A0A0C4DFX4 3053 aa10.11□□□□□ -0.79
SF3A1-207ENST00000471342 ZSCAN5CA6NGD5 496 aaPredicted RBP10.11□□□□□ -0.79
SF3A1-207ENST00000471342 SLC9A3R1O14745 358 aaPredicted RBP10.11□□□□□ -0.79
SF3A1-207ENST00000471342 PHF2O75151 1096 aa10.11□□□□□ -0.79
SF3A1-207ENST00000471342 TJP3O95049 919 aa10.11□□□□□ -0.79
SF3A1-207ENST00000471342 METTL18O95568 372 aa10.11□□□□□ -0.79
SF3A1-207ENST00000471342 RBP3P10745 1247 aa10.11□□□□□ -0.79
SF3A1-207ENST00000471342 CCNCP24863 283 aa10.11□□□□□ -0.79
SF3A1-207ENST00000471342 PTPN3P26045 913 aa10.11□□□□□ -0.79
SF3A1-207ENST00000471342 ECHS1P30084 290 aa10.11□□□□□ -0.79
SF3A1-207ENST00000471342 OR1E1P30953 314 aa10.11□□□□□ -0.79
SF3A1-207ENST00000471342 CTHP32929 405 aa10.11□□□□□ -0.79
SF3A1-207ENST00000471342 EIF2DP41214 584 aaKnown RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms