RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 NFATC1O95644 943 aa6.17□□□□□ -1.42
CCDC39-202ENST00000471307 ALDOCP09972 364 aaKnown RBP6.17□□□□□ -1.42
CCDC39-202ENST00000471307 KCNJ4P48050 445 aa6.17□□□□□ -1.42
CCDC39-202ENST00000471307 SHC2P98077 582 aa6.17□□□□□ -1.42
CCDC39-202ENST00000471307 STARD3Q14849 445 aa6.17□□□□□ -1.42
CCDC39-202ENST00000471307 PDXDC1Q6P996 788 aa6.17□□□□□ -1.42
CCDC39-202ENST00000471307 ATP2A3Q93084 1043 aa6.17□□□□□ -1.42
CCDC39-202ENST00000471307 CAMK1GQ96NX5 476 aa6.17□□□□□ -1.42
CCDC39-202ENST00000471307 ELAC2Q9BQ52 826 aaKnown RBP6.17□□□□□ -1.42
CCDC39-202ENST00000471307 CCDC134Q9H6E4 229 aa6.17□□□□□ -1.42
CCDC39-202ENST00000471307 TNFSF13BQ9Y275 285 aa6.17□□□□□ -1.42
CCDC39-202ENST00000471307 REREQ9P2R6 1566 aa6.17□□□□□ -1.42
CCDC39-202ENST00000471307 ABCA6Q8N139 1617 aa6.17□□□□□ -1.42
CCDC39-202ENST00000471307 BCORL1Q5H9F3 1711 aa6.16□□□□□ -1.42
CCDC39-202ENST00000471307 AGLP35573 1532 aa6.16□□□□□ -1.42
CCDC39-202ENST00000471307 KDM5DQ9BY66 1539 aa6.16□□□□□ -1.42
CCDC39-202ENST00000471307 MBD3L5A6NJ08 208 aaPredicted RBP6.16□□□□□ -1.42
CCDC39-202ENST00000471307 MDM4O15151 490 aa6.16□□□□□ -1.42
CCDC39-202ENST00000471307 KLRK1P26718 216 aa6.16□□□□□ -1.42
CCDC39-202ENST00000471307 PPM1AP35813 382 aa6.16□□□□□ -1.42
CCDC39-202ENST00000471307 CDK7P50613 346 aa6.16□□□□□ -1.42
CCDC39-202ENST00000471307 C10orf76Q5T2E6 689 aa6.16□□□□□ -1.42
CCDC39-202ENST00000471307 ASPHD1Q5U4P2 390 aa6.16□□□□□ -1.42
CCDC39-202ENST00000471307 RUSC1-AS1Q66K80 236 aa6.16□□□□□ -1.42
CCDC39-202ENST00000471307 GGT6Q6P531 493 aa6.16□□□□□ -1.42
CCDC39-202ENST00000471307 MEPCEQ7L2J0 689 aaKnown RBP6.16□□□□□ -1.42
CCDC39-202ENST00000471307 FAM71BQ8TC56 605 aa6.16□□□□□ -1.42
CCDC39-202ENST00000471307 AAMDCQ9H7C9 122 aa6.16□□□□□ -1.42
CCDC39-202ENST00000471307 MRPL44Q9H9J2 332 aaKnown RBP6.16□□□□□ -1.42
CCDC39-202ENST00000471307 SLC12A4Q9UP95 1085 aa6.16□□□□□ -1.42
CCDC39-202ENST00000471307 UNC13BO14795 1591 aa6.15□□□□□ -1.42
CCDC39-202ENST00000471307 DEPDC5O75140 1603 aa6.15□□□□□ -1.42
CCDC39-202ENST00000471307 TBC1D3DA0A087WVF3 549 aa6.15□□□□□ -1.42
CCDC39-202ENST00000471307 TBC1D3IA0A087WXS9 549 aa6.15□□□□□ -1.42
CCDC39-202ENST00000471307 TBC1D3EA0A087X179 549 aa6.15□□□□□ -1.42
CCDC39-202ENST00000471307 TBC1D3KA0A087X1G2 549 aa6.15□□□□□ -1.42
CCDC39-202ENST00000471307 TBC1D3BA6NDS4 549 aa6.15□□□□□ -1.42
CCDC39-202ENST00000471307 TBC1D3FA6NER0 549 aaPredicted RBP6.15□□□□□ -1.42
CCDC39-202ENST00000471307 A6NNC1 897 aa6.15□□□□□ -1.42
CCDC39-202ENST00000471307 TBC1D3LB9A6J9 549 aa6.15□□□□□ -1.42
CCDC39-202ENST00000471307 KLKB1P03952 638 aa6.15□□□□□ -1.42
CCDC39-202ENST00000471307 TBC1D3HP0C7X1 549 aa6.15□□□□□ -1.42
CCDC39-202ENST00000471307 T-ENOLP0DO92 83 aa6.15□□□□□ -1.42
CCDC39-202ENST00000471307 CHRNB1P11230 501 aa6.15□□□□□ -1.42
CCDC39-202ENST00000471307 HOXB2P14652 356 aa6.15□□□□□ -1.42
CCDC39-202ENST00000471307 AKT1P31749 480 aa6.15□□□□□ -1.42
CCDC39-202ENST00000471307 CDKN2AP42771 156 aaKnown RBP6.15□□□□□ -1.42
CCDC39-202ENST00000471307 ADPRHP54922 357 aa6.15□□□□□ -1.42
CCDC39-202ENST00000471307 P2RX3P56373 397 aa6.15□□□□□ -1.42
CCDC39-202ENST00000471307 KRTAP10-9P60411 292 aa6.15□□□□□ -1.42
CCDC39-202ENST00000471307 GAD2Q05329 585 aa6.15□□□□□ -1.42
CCDC39-202ENST00000471307 PPATQ06203 517 aa6.15□□□□□ -1.42
CCDC39-202ENST00000471307 KLHL22Q53GT1 634 aa6.15□□□□□ -1.42
CCDC39-202ENST00000471307 TBC1D3GQ6DHY5 549 aa6.15□□□□□ -1.42
CCDC39-202ENST00000471307 TBC1D3CQ6IPX1 549 aa6.15□□□□□ -1.42
CCDC39-202ENST00000471307 KIAA1161Q6NSJ0 714 aa6.15□□□□□ -1.42
CCDC39-202ENST00000471307 RINLQ6ZS11 566 aa6.15□□□□□ -1.42
CCDC39-202ENST00000471307 TBC1D3Q8IZP1 549 aaPredicted RBP6.15□□□□□ -1.42
CCDC39-202ENST00000471307 TMEM174Q8WUU8 243 aa6.15□□□□□ -1.42
CCDC39-202ENST00000471307 THOC3Q96J01 351 aaKnown RBP6.15□□□□□ -1.42
CCDC39-202ENST00000471307 HIPK2Q9H2X6 1198 aa6.15□□□□□ -1.42
CCDC39-202ENST00000471307 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.15□□□□□ -1.42
CCDC39-202ENST00000471307 TRPC5Q9UL62 973 aaPredicted RBP6.15□□□□□ -1.42
CCDC39-202ENST00000471307 PZPP20742 1482 aa6.15□□□□□ -1.43
CCDC39-202ENST00000471307 ARHGEF40Q8TER5 1519 aa6.15□□□□□ -1.43
CCDC39-202ENST00000471307 RNF17Q9BXT8 1623 aaKnown RBP6.14□□□□□ -1.43
CCDC39-202ENST00000471307 KCNJ18B7U540 433 aa6.14□□□□□ -1.43
CCDC39-202ENST00000471307 KIF28PB7ZC32 967 aa6.14□□□□□ -1.43
CCDC39-202ENST00000471307 MCIDASD6RGH6 385 aa6.14□□□□□ -1.43
CCDC39-202ENST00000471307 FFAR2O15552 330 aa6.14□□□□□ -1.43
CCDC39-202ENST00000471307 DNPH1O43598 174 aa6.14□□□□□ -1.43
CCDC39-202ENST00000471307 ASNA1O43681 348 aa6.14□□□□□ -1.43
CCDC39-202ENST00000471307 PLIN1O60240 522 aa6.14□□□□□ -1.43
CCDC39-202ENST00000471307 STAT1P42224 750 aa6.14□□□□□ -1.43
CCDC39-202ENST00000471307 POLE2P56282 527 aa6.14□□□□□ -1.43
CCDC39-202ENST00000471307 PTK2BQ14289 1009 aa6.14□□□□□ -1.43
CCDC39-202ENST00000471307 SPARCL1Q14515 664 aa6.14□□□□□ -1.43
CCDC39-202ENST00000471307 TBRG1Q3YBR2 411 aa6.14□□□□□ -1.43
CCDC39-202ENST00000471307 KDELC2Q7Z4H8 507 aa6.14□□□□□ -1.43
CCDC39-202ENST00000471307 SVIPQ8NHG7 77 aa6.14□□□□□ -1.43
CCDC39-202ENST00000471307 B4GALNT2Q8NHY0 566 aa6.14□□□□□ -1.43
CCDC39-202ENST00000471307 EID2BQ96D98 161 aa6.14□□□□□ -1.43
CCDC39-202ENST00000471307 NPAS1Q99742 590 aa6.14□□□□□ -1.43
CCDC39-202ENST00000471307 TMEM120AQ9BXJ8 343 aa6.14□□□□□ -1.43
CCDC39-202ENST00000471307 ZNF700Q9H0M5 742 aa6.14□□□□□ -1.43
CCDC39-202ENST00000471307 RBM38Q9H0Z9 239 aaKnown RBP6.14□□□□□ -1.43
CCDC39-202ENST00000471307 IL21RQ9HBE5 538 aa6.14□□□□□ -1.43
CCDC39-202ENST00000471307 LIN7CQ9NUP9 197 aaKnown RBP6.14□□□□□ -1.43
CCDC39-202ENST00000471307 RAB21Q9UL25 225 aa6.14□□□□□ -1.43
CCDC39-202ENST00000471307 CNTN6Q9UQ52 1028 aa6.14□□□□□ -1.43
CCDC39-202ENST00000471307 COPG1Q9Y678 874 aaKnown RBP6.14□□□□□ -1.43
CCDC39-202ENST00000471307 FAM135AQ9P2D6 1515 aa6.14□□□□□ -1.43
CCDC39-202ENST00000471307 VWDEQ8N2E2 1590 aa6.14□□□□□ -1.43
CCDC39-202ENST00000471307 IQGAP3Q86VI3 1631 aa6.14□□□□□ -1.43
CCDC39-202ENST00000471307 SLC38A8A6NNN8 435 aa6.13□□□□□ -1.43
CCDC39-202ENST00000471307 SF3A3Q12874 501 aaKnown RBP eCLIP6.13□□□□□ -1.43
CCDC39-202ENST00000471307 GALNT3Q14435 633 aa6.13□□□□□ -1.43
CCDC39-202ENST00000471307 NUGGCQ68CJ6 796 aa6.13□□□□□ -1.43
CCDC39-202ENST00000471307 RTL10Q7L3V2 364 aa6.13□□□□□ -1.43
CCDC39-202ENST00000471307 MDGA2Q7Z553 956 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms