RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 ERVMER34-1Q9H9K5 563 aa6.1□□□□□ -1.43
VARS-222ENST00000470953 SGK2Q9HBY8 427 aa6.1□□□□□ -1.43
VARS-222ENST00000470953 PRSS16Q9NQE7 514 aa6.1□□□□□ -1.43
VARS-222ENST00000470953 SEPT10Q9P0V9 454 aa6.1□□□□□ -1.43
VARS-222ENST00000470953 MAPK8IP1Q9UQF2 711 aa6.1□□□□□ -1.43
VARS-222ENST00000470953 CA5BQ9Y2D0 317 aa6.1□□□□□ -1.43
VARS-222ENST00000470953 SLC27A6Q9Y2P4 619 aa6.1□□□□□ -1.43
VARS-222ENST00000470953 NME7Q9Y5B8 376 aa6.1□□□□□ -1.43
VARS-222ENST00000470953 MXRA5Q9NR99 2828 aa6.1□□□□□ -1.43
VARS-222ENST00000470953 NBEAL2Q6ZNJ1 2754 aa6.1□□□□□ -1.43
VARS-222ENST00000470953 MAP1AP78559 2803 aaPredicted RBP6.09□□□□□ -1.43
VARS-222ENST00000470953 CLDN5O00501 218 aa6.09□□□□□ -1.43
VARS-222ENST00000470953 PDXKO00764 312 aa6.09□□□□□ -1.43
VARS-222ENST00000470953 PSMA7O14818 248 aa6.09□□□□□ -1.43
VARS-222ENST00000470953 NPC1O15118 1278 aa6.09□□□□□ -1.43
VARS-222ENST00000470953 TGFB1I1O43294 461 aa6.09□□□□□ -1.43
VARS-222ENST00000470953 GRID2O43424 1007 aa6.09□□□□□ -1.43
VARS-222ENST00000470953 KLRC4O43908 158 aa6.09□□□□□ -1.43
VARS-222ENST00000470953 NEBLO76041 1014 aa6.09□□□□□ -1.43
VARS-222ENST00000470953 RHOBTB3O94955 611 aa6.09□□□□□ -1.43
VARS-222ENST00000470953 PENKP01210 267 aaPredicted RBP6.09□□□□□ -1.43
VARS-222ENST00000470953 DNTTP04053 509 aa6.09□□□□□ -1.43
VARS-222ENST00000470953 GP1BAP07359 652 aa6.09□□□□□ -1.43
VARS-222ENST00000470953 PDGFRBP09619 1106 aa6.09□□□□□ -1.43
VARS-222ENST00000470953 HGFP14210 728 aa6.09□□□□□ -1.43
VARS-222ENST00000470953 PTGER4P35408 488 aa6.09□□□□□ -1.43
VARS-222ENST00000470953 HOXD13P35453 343 aa6.09□□□□□ -1.43
VARS-222ENST00000470953 CASP4P49662 377 aa6.09□□□□□ -1.43
VARS-222ENST00000470953 PPP2CBP62714 309 aa6.09□□□□□ -1.43
VARS-222ENST00000470953 PPP2CAP67775 309 aa6.09□□□□□ -1.43
VARS-222ENST00000470953 EHHADHQ08426 723 aa6.09□□□□□ -1.43
VARS-222ENST00000470953 DPYDQ12882 1025 aa6.09□□□□□ -1.43
VARS-222ENST00000470953 PNOCQ13519 176 aa6.09□□□□□ -1.43
VARS-222ENST00000470953 NCOA4Q13772 614 aa6.09□□□□□ -1.43
VARS-222ENST00000470953 WDR72Q3MJ13 1102 aa6.09□□□□□ -1.43
VARS-222ENST00000470953 PRR30Q53SZ7 412 aaPredicted RBP6.09□□□□□ -1.43
VARS-222ENST00000470953 DCAF17Q5H9S7 520 aaPredicted RBP6.09□□□□□ -1.43
VARS-222ENST00000470953 ZNF667Q5HYK9 610 aa6.09□□□□□ -1.43
VARS-222ENST00000470953 HECTD3Q5T447 861 aa6.09□□□□□ -1.43
VARS-222ENST00000470953 TCERG1LQ5VWI1 586 aa6.09□□□□□ -1.43
VARS-222ENST00000470953 FYB2Q5VWT5 728 aa6.09□□□□□ -1.43
VARS-222ENST00000470953 TDRD10Q5VZ19 366 aaKnown RBP6.09□□□□□ -1.43
VARS-222ENST00000470953 TMEM198Q66K66 360 aa6.09□□□□□ -1.43
VARS-222ENST00000470953 GUSBP11Q6P575 273 aa6.09□□□□□ -1.43
VARS-222ENST00000470953 INTS8Q75QN2 995 aaKnown RBP6.09□□□□□ -1.43
VARS-222ENST00000470953 TRAPPC11Q7Z392 1133 aa6.09□□□□□ -1.43
VARS-222ENST00000470953 C12orf56Q8IXR9 622 aa6.09□□□□□ -1.43
VARS-222ENST00000470953 ZC3H3Q8IXZ2 948 aaKnown RBP6.09□□□□□ -1.43
VARS-222ENST00000470953 FAM186BQ8IYM0 893 aa6.09□□□□□ -1.43
VARS-222ENST00000470953 IFI44Q8TCB0 444 aa6.09□□□□□ -1.43
VARS-222ENST00000470953 KBTBD7Q8WVZ9 684 aa6.09□□□□□ -1.43
VARS-222ENST00000470953 FBXO32Q969P5 355 aa6.09□□□□□ -1.43
VARS-222ENST00000470953 SKA1Q96BD8 255 aa6.09□□□□□ -1.43
VARS-222ENST00000470953 C8orf48Q96LL4 319 aa6.09□□□□□ -1.43
VARS-222ENST00000470953 NAP1L5Q96NT1 182 aaPredicted RBP6.09□□□□□ -1.43
VARS-222ENST00000470953 SLITRK1Q96PX8 696 aa6.09□□□□□ -1.43
VARS-222ENST00000470953 MED10Q9BTT4 135 aa6.09□□□□□ -1.43
VARS-222ENST00000470953 GTPBP4Q9BZE4 634 aaKnown RBP6.09□□□□□ -1.43
VARS-222ENST00000470953 TRIM8Q9BZR9 551 aa6.09□□□□□ -1.43
VARS-222ENST00000470953 NEUROG2Q9H2A3 272 aa6.09□□□□□ -1.43
VARS-222ENST00000470953 GDAP2Q9NXN4 497 aa6.09□□□□□ -1.43
VARS-222ENST00000470953 SIX4Q9UIU6 781 aa6.09□□□□□ -1.43
VARS-222ENST00000470953 PKDREJQ9NTG1 2253 aa6.09□□□□□ -1.44
VARS-222ENST00000470953 MEGF8Q7Z7M0 2845 aa6.08□□□□□ -1.44
VARS-222ENST00000470953 CCDC187A0A096LP49 1063 aa6.08□□□□□ -1.44
VARS-222ENST00000470953 FAM237AA0A1B0GTK4 181 aa6.08□□□□□ -1.44
VARS-222ENST00000470953 A0A1W2PP55 124 aa6.08□□□□□ -1.44
VARS-222ENST00000470953 LRRIQ3A6PVS8 624 aaPredicted RBP6.08□□□□□ -1.44
VARS-222ENST00000470953 A8MXQ7 604 aa6.08□□□□□ -1.44
VARS-222ENST00000470953 AGRPO00253 132 aa6.08□□□□□ -1.44
VARS-222ENST00000470953 MDM4O15151 490 aa6.08□□□□□ -1.44
VARS-222ENST00000470953 CETN3O15182 167 aa6.08□□□□□ -1.44
VARS-222ENST00000470953 STX10O60499 249 aa6.08□□□□□ -1.44
VARS-222ENST00000470953 KLKB1P03952 638 aa6.08□□□□□ -1.44
VARS-222ENST00000470953 TRIM49P0CI25 452 aa6.08□□□□□ -1.44
VARS-222ENST00000470953 TRIM49CP0CI26 452 aa6.08□□□□□ -1.44
VARS-222ENST00000470953 KLK2P20151 261 aa6.08□□□□□ -1.44
VARS-222ENST00000470953 YWHAQP27348 245 aa6.08□□□□□ -1.44
VARS-222ENST00000470953 ATICP31939 592 aa6.08□□□□□ -1.44
VARS-222ENST00000470953 CLCN1P35523 988 aa6.08□□□□□ -1.44
VARS-222ENST00000470953 PSMC2P35998 433 aaKnown RBP6.08□□□□□ -1.44
VARS-222ENST00000470953 VAMP7P51809 220 aa6.08□□□□□ -1.44
VARS-222ENST00000470953 MYL6P60660 151 aa6.08□□□□□ -1.44
VARS-222ENST00000470953 C1QBPQ07021 282 aaKnown RBP6.08□□□□□ -1.44
VARS-222ENST00000470953 CDKN3Q16667 212 aa6.08□□□□□ -1.44
VARS-222ENST00000470953 CCDC40Q4G0X9 1142 aa6.08□□□□□ -1.44
VARS-222ENST00000470953 MDH1BQ5I0G3 518 aa6.08□□□□□ -1.44
VARS-222ENST00000470953 PERM1Q5SV97 790 aa6.08□□□□□ -1.44
VARS-222ENST00000470953 SNX30Q5VWJ9 437 aa6.08□□□□□ -1.44
VARS-222ENST00000470953 KLHL10Q6JEL2 608 aa6.08□□□□□ -1.44
VARS-222ENST00000470953 Q6ZNB5 142 aa6.08□□□□□ -1.44
VARS-222ENST00000470953 ANKS1BQ7Z6G8 1248 aa6.08□□□□□ -1.44
VARS-222ENST00000470953 B3GNT8Q7Z7M8 397 aa6.08□□□□□ -1.44
VARS-222ENST00000470953 DTX1Q86Y01 620 aa6.08□□□□□ -1.44
VARS-222ENST00000470953 TGIF2LYQ8IUE0 185 aa6.08□□□□□ -1.44
VARS-222ENST00000470953 SLC9A9Q8IVB4 645 aa6.08□□□□□ -1.44
VARS-222ENST00000470953 PHC2Q8IXK0 858 aa6.08□□□□□ -1.44
VARS-222ENST00000470953 SMYD4Q8IYR2 804 aaPredicted RBP6.08□□□□□ -1.44
VARS-222ENST00000470953 GUF1Q8N442 669 aaKnown RBP6.08□□□□□ -1.44
VARS-222ENST00000470953 FAM174AQ8TBP5 190 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms