RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 SYPL2Q5VXT5 272 aa6.86□□□□□ -1.31
VAMP3-202ENST00000470357 PLPP4Q5VZY2 271 aa6.86□□□□□ -1.31
VAMP3-202ENST00000470357 TRNP1Q6NT89 227 aa6.86□□□□□ -1.31
VAMP3-202ENST00000470357 LILRA6Q6PI73 481 aa6.86□□□□□ -1.31
VAMP3-202ENST00000470357 IGF2-ASQ6U949 168 aa6.86□□□□□ -1.31
VAMP3-202ENST00000470357 SPOCD1Q6ZMY3 1216 aa6.86□□□□□ -1.31
VAMP3-202ENST00000470357 BHLHA9Q7RTU4 235 aa6.86□□□□□ -1.31
VAMP3-202ENST00000470357 MAATS1Q7Z4T9 603 aa6.86□□□□□ -1.31
VAMP3-202ENST00000470357 SUGP1Q8IWZ8 645 aaKnown RBP6.86□□□□□ -1.31
VAMP3-202ENST00000470357 TTC9BQ8N6N2 239 aa6.86□□□□□ -1.31
VAMP3-202ENST00000470357 TMEM102Q8N9M5 508 aaPredicted RBP6.86□□□□□ -1.31
VAMP3-202ENST00000470357 SMRP1Q8NCR6 262 aa6.86□□□□□ -1.31
VAMP3-202ENST00000470357 KREMEN2Q8NCW0 462 aa6.86□□□□□ -1.31
VAMP3-202ENST00000470357 GALNT11Q8NCW6 608 aa6.86□□□□□ -1.31
VAMP3-202ENST00000470357 SPATA4Q8NEY3 305 aa6.86□□□□□ -1.31
VAMP3-202ENST00000470357 CCDC26Q8TAB7 109 aa6.86□□□□□ -1.31
VAMP3-202ENST00000470357 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.86□□□□□ -1.31
VAMP3-202ENST00000470357 DQX1Q8TE96 717 aaKnown RBP6.86□□□□□ -1.31
VAMP3-202ENST00000470357 AUTS2Q8WXX7 1259 aa6.86□□□□□ -1.31
VAMP3-202ENST00000470357 RUBCNQ92622 972 aa6.86□□□□□ -1.31
VAMP3-202ENST00000470357 RNF34Q969K3 372 aa6.86□□□□□ -1.31
VAMP3-202ENST00000470357 PSMG2Q969U7 264 aa6.86□□□□□ -1.31
VAMP3-202ENST00000470357 ZNF512Q96ME7 567 aaPredicted RBP6.86□□□□□ -1.31
VAMP3-202ENST00000470357 GCNAQ96QF7 691 aa6.86□□□□□ -1.31
VAMP3-202ENST00000470357 CDCA3Q99618 268 aaPredicted RBP6.86□□□□□ -1.31
VAMP3-202ENST00000470357 ZNF670Q9BS34 389 aa6.86□□□□□ -1.31
VAMP3-202ENST00000470357 CALN1Q9BXU9 219 aa6.86□□□□□ -1.31
VAMP3-202ENST00000470357 MAK16Q9BXY0 300 aaKnown RBP6.86□□□□□ -1.31
VAMP3-202ENST00000470357 RBCK1Q9BYM8 510 aa6.86□□□□□ -1.31
VAMP3-202ENST00000470357 SLITRK6Q9H5Y7 841 aa6.86□□□□□ -1.31
VAMP3-202ENST00000470357 WDCPQ9H6R7 721 aa6.86□□□□□ -1.31
VAMP3-202ENST00000470357 ZWILCHQ9H900 591 aa6.86□□□□□ -1.31
VAMP3-202ENST00000470357 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.86□□□□□ -1.31
VAMP3-202ENST00000470357 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.86□□□□□ -1.31
VAMP3-202ENST00000470357 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.86□□□□□ -1.31
VAMP3-202ENST00000470357 DONSONQ9NYP3 566 aa6.86□□□□□ -1.31
VAMP3-202ENST00000470357 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.86□□□□□ -1.31
VAMP3-202ENST00000470357 GMIPQ9P107 970 aa6.86□□□□□ -1.31
VAMP3-202ENST00000470357 PCSK1NQ9UHG2 260 aa6.86□□□□□ -1.31
VAMP3-202ENST00000470357 MAGED2Q9UNF1 606 aaPredicted RBP6.86□□□□□ -1.31
VAMP3-202ENST00000470357 AP4E1Q9UPM8 1137 aa6.86□□□□□ -1.31
VAMP3-202ENST00000470357 NAALADL1Q9UQQ1 740 aa6.86□□□□□ -1.31
VAMP3-202ENST00000470357 TLR6Q9Y2C9 796 aa6.86□□□□□ -1.31
VAMP3-202ENST00000470357 HBS1LQ9Y450 684 aaKnown RBP6.86□□□□□ -1.31
VAMP3-202ENST00000470357 DOCK4Q8N1I0 1966 aa6.86□□□□□ -1.31
VAMP3-202ENST00000470357 HELZP42694 1942 aaKnown RBP6.86□□□□□ -1.31
VAMP3-202ENST00000470357 EP300Q09472 2414 aaPredicted RBP6.85□□□□□ -1.31
VAMP3-202ENST00000470357 A0A1W2PQH9 124 aa6.85□□□□□ -1.31
VAMP3-202ENST00000470357 PRR23AA6NEV1 266 aa6.85□□□□□ -1.31
VAMP3-202ENST00000470357 H0Y858 1186 aa6.85□□□□□ -1.31
VAMP3-202ENST00000470357 IRAK2O43187 625 aa6.85□□□□□ -1.31
VAMP3-202ENST00000470357 TLR5O60602 858 aa6.85□□□□□ -1.31
VAMP3-202ENST00000470357 TADA3O75528 432 aa6.85□□□□□ -1.31
VAMP3-202ENST00000470357 SOAT2O75908 522 aa6.85□□□□□ -1.31
VAMP3-202ENST00000470357 GLP2RO95838 553 aa6.85□□□□□ -1.31
VAMP3-202ENST00000470357 PDGFBP01127 241 aaPredicted RBP6.85□□□□□ -1.31
VAMP3-202ENST00000470357 APOEP02649 317 aa6.85□□□□□ -1.31
VAMP3-202ENST00000470357 C8AP07357 584 aa6.85□□□□□ -1.31
VAMP3-202ENST00000470357 FURINP09958 794 aa6.85□□□□□ -1.31
VAMP3-202ENST00000470357 SRGAP2BP0DMP2 458 aa6.85□□□□□ -1.31
VAMP3-202ENST00000470357 PYGMP11217 842 aa6.85□□□□□ -1.31
VAMP3-202ENST00000470357 RARGP13631 454 aa6.85□□□□□ -1.31
VAMP3-202ENST00000470357 HMGA1P17096 107 aaKnown RBP6.85□□□□□ -1.31
VAMP3-202ENST00000470357 DDX6P26196 483 aaKnown RBP eCLIP6.85□□□□□ -1.31
VAMP3-202ENST00000470357 IL1R2P27930 398 aa6.85□□□□□ -1.31
VAMP3-202ENST00000470357 CHRNA3P32297 505 aa6.85□□□□□ -1.31
VAMP3-202ENST00000470357 ADRA1BP35368 520 aa6.85□□□□□ -1.31
VAMP3-202ENST00000470357 ATP5C1P36542 298 aaKnown RBP6.85□□□□□ -1.31
VAMP3-202ENST00000470357 CDKN2BP42772 138 aa6.85□□□□□ -1.31
VAMP3-202ENST00000470357 MARCKSL1P49006 195 aa6.85□□□□□ -1.31
VAMP3-202ENST00000470357 HCAR3P49019 387 aa6.85□□□□□ -1.31
VAMP3-202ENST00000470357 GPR15P49685 360 aa6.85□□□□□ -1.31
VAMP3-202ENST00000470357 CLCN4P51793 760 aa6.85□□□□□ -1.31
VAMP3-202ENST00000470357 CDH6P55285 790 aa6.85□□□□□ -1.31
VAMP3-202ENST00000470357 COG7P83436 770 aa6.85□□□□□ -1.31
VAMP3-202ENST00000470357 NRG1Q02297 640 aaPredicted RBP6.85□□□□□ -1.31
VAMP3-202ENST00000470357 DHX34Q14147 1143 aaKnown RBP6.85□□□□□ -1.31
VAMP3-202ENST00000470357 TAZQ16635 292 aa6.85□□□□□ -1.31
VAMP3-202ENST00000470357 SMTNL2Q2TAL5 461 aa6.85□□□□□ -1.31
VAMP3-202ENST00000470357 C10orf120Q5SQS8 335 aa6.85□□□□□ -1.31
VAMP3-202ENST00000470357 DCAF12L1Q5VU92 463 aa6.85□□□□□ -1.31
VAMP3-202ENST00000470357 SDHAF4Q5VUM1 108 aa6.85□□□□□ -1.31
VAMP3-202ENST00000470357 NUGGCQ68CJ6 796 aa6.85□□□□□ -1.31
VAMP3-202ENST00000470357 BBS12Q6ZW61 710 aa6.85□□□□□ -1.31
VAMP3-202ENST00000470357 PDZD4Q76G19 769 aaPredicted RBP6.85□□□□□ -1.31
VAMP3-202ENST00000470357 BZW1Q7L1Q6 419 aaKnown RBP6.85□□□□□ -1.31
VAMP3-202ENST00000470357 ERMP1Q7Z2K6 904 aa6.85□□□□□ -1.31
VAMP3-202ENST00000470357 DNAJB7Q7Z6W7 309 aaPredicted RBP6.85□□□□□ -1.31
VAMP3-202ENST00000470357 ADGRD2Q7Z7M1 963 aa6.85□□□□□ -1.31
VAMP3-202ENST00000470357 SCD5Q86SK9 330 aa6.85□□□□□ -1.31
VAMP3-202ENST00000470357 TAC4Q86UU9 113 aa6.85□□□□□ -1.31
VAMP3-202ENST00000470357 UNC45BQ8IWX7 931 aa6.85□□□□□ -1.31
VAMP3-202ENST00000470357 GALNT12Q8IXK2 581 aa6.85□□□□□ -1.31
VAMP3-202ENST00000470357 MMGT1Q8N4V1 131 aa6.85□□□□□ -1.31
VAMP3-202ENST00000470357 ARFGAP1Q8N6T3 406 aa6.85□□□□□ -1.31
VAMP3-202ENST00000470357 EFHBQ8N7U6 833 aa6.85□□□□□ -1.31
VAMP3-202ENST00000470357 ATP6V0D2Q8N8Y2 350 aa6.85□□□□□ -1.31
VAMP3-202ENST00000470357 FAM71BQ8TC56 605 aa6.85□□□□□ -1.31
VAMP3-202ENST00000470357 GIPC2Q8TF65 315 aa6.85□□□□□ -1.31
VAMP3-202ENST00000470357 GRK7Q8WTQ7 553 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms