RNA–Protein interactions for RNA: ENST00000470243.5

SRRM1-208, Transcript of serine and arginine repetitive matrix 1, human

TSL 5

Gene SRRM1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM1-208	ENST00000470243	DERA	Q9Y315	318 aa		4.64	□□□□□ -1.67
SRRM1-208	ENST00000470243	KIAA0232	Q92628	1395 aa		4.64	□□□□□ -1.67
SRRM1-208	ENST00000470243	SPTBN5	Q9NRC6	3674 aa	Known RBP	4.64	□□□□□ -1.67
SRRM1-208	ENST00000470243	ITSN1	Q15811	1721 aa		4.63	□□□□□ -1.67
SRRM1-208	ENST00000470243	TBC1D3D	A0A087WVF3	549 aa		4.63	□□□□□ -1.67
SRRM1-208	ENST00000470243	TBC1D3I	A0A087WXS9	549 aa		4.63	□□□□□ -1.67
SRRM1-208	ENST00000470243	TBC1D3E	A0A087X179	549 aa		4.63	□□□□□ -1.67
SRRM1-208	ENST00000470243	TBC1D3K	A0A087X1G2	549 aa		4.63	□□□□□ -1.67
SRRM1-208	ENST00000470243	TBC1D3B	A6NDS4	549 aa		4.63	□□□□□ -1.67
SRRM1-208	ENST00000470243	TBC1D3F	A6NER0	549 aa	Predicted RBP	4.63	□□□□□ -1.67
SRRM1-208	ENST00000470243	MBD3L5	A6NJ08	208 aa	Predicted RBP	4.63	□□□□□ -1.67
SRRM1-208	ENST00000470243	TBC1D3L	B9A6J9	549 aa		4.63	□□□□□ -1.67
SRRM1-208	ENST00000470243	GCOM1	H8Y6P7	765 aa	Predicted RBP	4.63	□□□□□ -1.67
SRRM1-208	ENST00000470243	FOXN1	O15353	648 aa		4.63	□□□□□ -1.67
SRRM1-208	ENST00000470243	EXOC3	O60645	756 aa		4.63	□□□□□ -1.67
SRRM1-208	ENST00000470243	CSF1	P09603	554 aa		4.63	□□□□□ -1.67
SRRM1-208	ENST00000470243	FAM163B	P0C2L3	166 aa		4.63	□□□□□ -1.67
SRRM1-208	ENST00000470243	TBC1D3H	P0C7X1	549 aa		4.63	□□□□□ -1.67
SRRM1-208	ENST00000470243	ACVRL1	P37023	503 aa		4.63	□□□□□ -1.67
SRRM1-208	ENST00000470243	JAK3	P52333	1124 aa		4.63	□□□□□ -1.67
SRRM1-208	ENST00000470243	RCAN1	P53805	252 aa		4.63	□□□□□ -1.67
SRRM1-208	ENST00000470243	FOXL2	P58012	376 aa		4.63	□□□□□ -1.67
SRRM1-208	ENST00000470243	UBE3A	Q05086	875 aa		4.63	□□□□□ -1.67
SRRM1-208	ENST00000470243	DLGAP5	Q15398	846 aa		4.63	□□□□□ -1.67
SRRM1-208	ENST00000470243	TBC1D3G	Q6DHY5	549 aa		4.63	□□□□□ -1.67
SRRM1-208	ENST00000470243	TBC1D3C	Q6IPX1	549 aa		4.63	□□□□□ -1.67
SRRM1-208	ENST00000470243	MTHFD1L	Q6UB35	978 aa		4.63	□□□□□ -1.67
SRRM1-208	ENST00000470243	SLC29A4	Q7RTT9	530 aa		4.63	□□□□□ -1.67
SRRM1-208	ENST00000470243	BCDIN3D	Q7Z5W3	292 aa	Known RBP	4.63	□□□□□ -1.67
SRRM1-208	ENST00000470243	TBC1D3	Q8IZP1	549 aa	Predicted RBP	4.63	□□□□□ -1.67
SRRM1-208	ENST00000470243	LINC01465	Q8N7H1	131 aa		4.63	□□□□□ -1.67
SRRM1-208	ENST00000470243	C12orf76	Q8N812	135 aa	Predicted RBP	4.63	□□□□□ -1.67
SRRM1-208	ENST00000470243	FAM71D	Q8N9W8	422 aa		4.63	□□□□□ -1.67
SRRM1-208	ENST00000470243	LINS1	Q8NG48	757 aa		4.63	□□□□□ -1.67
SRRM1-208	ENST00000470243	SLC2A12	Q8TD20	617 aa		4.63	□□□□□ -1.67
SRRM1-208	ENST00000470243	GLMP	Q8WWB7	406 aa		4.63	□□□□□ -1.67
SRRM1-208	ENST00000470243	KTI12	Q96EK9	354 aa	Predicted RBP	4.63	□□□□□ -1.67
SRRM1-208	ENST00000470243	ABHD8	Q96I13	439 aa		4.63	□□□□□ -1.67
SRRM1-208	ENST00000470243	MAEL	Q96JY0	434 aa	Known RBP	4.63	□□□□□ -1.67
SRRM1-208	ENST00000470243	HERC2P3	Q9BVR0	1158 aa		4.63	□□□□□ -1.67
SRRM1-208	ENST00000470243	UBA5	Q9GZZ9	404 aa		4.63	□□□□□ -1.67
SRRM1-208	ENST00000470243	ASIC5	Q9NY37	505 aa		4.63	□□□□□ -1.67
SRRM1-208	ENST00000470243	PNMA2	Q9UL42	364 aa		4.63	□□□□□ -1.67
SRRM1-208	ENST00000470243	SLC12A4	Q9UP95	1085 aa		4.63	□□□□□ -1.67
SRRM1-208	ENST00000470243	DNAJC16	Q9Y2G8	782 aa		4.63	□□□□□ -1.67
SRRM1-208	ENST00000470243	PCDHA10	Q9Y5I2	948 aa		4.63	□□□□□ -1.67
SRRM1-208	ENST00000470243	KAT6A	Q92794	2004 aa		4.63	□□□□□ -1.67
SRRM1-208	ENST00000470243	TIAM2	Q8IVF5	1701 aa		4.63	□□□□□ -1.67
SRRM1-208	ENST00000470243	BCL9	O00512	1426 aa		4.63	□□□□□ -1.67
SRRM1-208	ENST00000470243	PIK3C2G	O75747	1445 aa		4.63	□□□□□ -1.67
SRRM1-208	ENST00000470243	RANBP2	P49792	3224 aa	Known RBP	4.62	□□□□□ -1.67
SRRM1-208	ENST00000470243	C5	P01031	1676 aa		4.62	□□□□□ -1.67
SRRM1-208	ENST00000470243	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	4.62	□□□□□ -1.67
SRRM1-208	ENST00000470243	CYR61	O00622	381 aa		4.62	□□□□□ -1.67
SRRM1-208	ENST00000470243	FYB1	O15117	783 aa		4.62	□□□□□ -1.67
SRRM1-208	ENST00000470243	KAT7	O95251	611 aa		4.62	□□□□□ -1.67
SRRM1-208	ENST00000470243	CNP	P09543	421 aa	Known RBP	4.62	□□□□□ -1.67
SRRM1-208	ENST00000470243	MATN1	P21941	496 aa		4.62	□□□□□ -1.67
SRRM1-208	ENST00000470243	LIFR	P42702	1097 aa		4.62	□□□□□ -1.67
SRRM1-208	ENST00000470243	MCM2	P49736	904 aa		4.62	□□□□□ -1.67
SRRM1-208	ENST00000470243	WDR5	P61964	334 aa	Known RBP	4.62	□□□□□ -1.67
SRRM1-208	ENST00000470243	GAB1	Q13480	694 aa		4.62	□□□□□ -1.67
SRRM1-208	ENST00000470243	MFSD13A	Q14CX5	517 aa		4.62	□□□□□ -1.67
SRRM1-208	ENST00000470243	TBRG1	Q3YBR2	411 aa		4.62	□□□□□ -1.67
SRRM1-208	ENST00000470243	AWAT1	Q58HT5	328 aa		4.62	□□□□□ -1.67
SRRM1-208	ENST00000470243	MAP3K21	Q5TCX8	1036 aa		4.62	□□□□□ -1.67
SRRM1-208	ENST00000470243	KYAT3	Q6YP21	454 aa	Known RBP	4.62	□□□□□ -1.67
SRRM1-208	ENST00000470243	CENPQ	Q7L2Z9	268 aa	Predicted RBP	4.62	□□□□□ -1.67
SRRM1-208	ENST00000470243	ZNF804A	Q7Z570	1209 aa		4.62	□□□□□ -1.67
SRRM1-208	ENST00000470243	AMIGO2	Q86SJ2	522 aa		4.62	□□□□□ -1.67
SRRM1-208	ENST00000470243	ULK2	Q8IYT8	1036 aa		4.62	□□□□□ -1.67
SRRM1-208	ENST00000470243	TERB1	Q8NA31	727 aa		4.62	□□□□□ -1.67
SRRM1-208	ENST00000470243	TEX19	Q8NA77	164 aa		4.62	□□□□□ -1.67
SRRM1-208	ENST00000470243	EXOC6	Q8TAG9	804 aa		4.62	□□□□□ -1.67
SRRM1-208	ENST00000470243	TBC1D5	Q92609	795 aa		4.62	□□□□□ -1.67
SRRM1-208	ENST00000470243	KAZALD1	Q96I82	304 aa		4.62	□□□□□ -1.67
SRRM1-208	ENST00000470243	BBC3	Q96PG8	261 aa	Predicted RBP	4.62	□□□□□ -1.67
SRRM1-208	ENST00000470243	TOR3A	Q9H497	397 aa		4.62	□□□□□ -1.67
SRRM1-208	ENST00000470243	WASH6P	Q9NQA3	447 aa		4.62	□□□□□ -1.67
SRRM1-208	ENST00000470243	ANAPC4	Q9UJX5	808 aa		4.62	□□□□□ -1.67
SRRM1-208	ENST00000470243	ADAM21	Q9UKJ8	722 aa		4.62	□□□□□ -1.67
SRRM1-208	ENST00000470243	BAG5	Q9UL15	447 aa		4.62	□□□□□ -1.67
SRRM1-208	ENST00000470243	FZD4	Q9ULV1	537 aa		4.62	□□□□□ -1.67
SRRM1-208	ENST00000470243	HS3ST3A1	Q9Y663	406 aa		4.62	□□□□□ -1.67
SRRM1-208	ENST00000470243	NUP155	O75694	1391 aa		4.62	□□□□□ -1.67
SRRM1-208	ENST00000470243	NPC1L1	Q9UHC9	1359 aa		4.62	□□□□□ -1.67
SRRM1-208	ENST00000470243	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	4.62	□□□□□ -1.67
SRRM1-208	ENST00000470243	UBR3	Q6ZT12	1888 aa		4.62	□□□□□ -1.67
SRRM1-208	ENST00000470243	C10orf71	Q711Q0	1435 aa		4.62	□□□□□ -1.67
SRRM1-208	ENST00000470243	PXDNL	A1KZ92	1463 aa		4.62	□□□□□ -1.67
SRRM1-208	ENST00000470243	COL5A2	P05997	1499 aa	Predicted RBP	4.62	□□□□□ -1.67
SRRM1-208	ENST00000470243	KCP	Q6ZWJ8	1503 aa		4.62	□□□□□ -1.67
SRRM1-208	ENST00000470243	C1R	P00736	705 aa		4.61	□□□□□ -1.67
SRRM1-208	ENST00000470243	ALDOA	P04075	364 aa	Known RBP	4.61	□□□□□ -1.67
SRRM1-208	ENST00000470243	HNRNPC	P07910	306 aa	Known RBP eCLIP	4.61	□□□□□ -1.67
SRRM1-208	ENST00000470243	ACP5	P13686	325 aa		4.61	□□□□□ -1.67
SRRM1-208	ENST00000470243	NDUFS1	P28331	727 aa		4.61	□□□□□ -1.67
SRRM1-208	ENST00000470243	DUSP1	P28562	367 aa		4.61	□□□□□ -1.67
SRRM1-208	ENST00000470243	RARRES1	P49788	294 aa		4.61	□□□□□ -1.67
SRRM1-208	ENST00000470243	TUB	P50607	506 aa		4.61	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms