RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 SULT1E1P49888 294 aa16.77■□□□□ 0.28
COL9A3-208ENST00000469802 ADPRHP54922 357 aa16.77■□□□□ 0.28
COL9A3-208ENST00000469802 CDH4P55283 916 aa16.77■□□□□ 0.28
COL9A3-208ENST00000469802 KRT31Q15323 416 aa16.77■□□□□ 0.28
COL9A3-208ENST00000469802 TEAD4Q15561 434 aa16.77■□□□□ 0.28
COL9A3-208ENST00000469802 TRIP6Q15654 476 aaKnown RBP16.77■□□□□ 0.28
COL9A3-208ENST00000469802 ZNF423Q2M1K9 1284 aa16.77■□□□□ 0.28
COL9A3-208ENST00000469802 SLC25A52Q3SY17 297 aa16.77■□□□□ 0.28
COL9A3-208ENST00000469802 FAM102AQ5T9C2 384 aaPredicted RBP16.77■□□□□ 0.28
COL9A3-208ENST00000469802 TAF3Q5VWG9 929 aa16.77■□□□□ 0.28
COL9A3-208ENST00000469802 NCEH1Q6PIU2 408 aa16.77■□□□□ 0.28
COL9A3-208ENST00000469802 LAYNQ6UX15 382 aa16.77■□□□□ 0.28
COL9A3-208ENST00000469802 RAB44Q7Z6P3 723 aaPredicted RBP16.77■□□□□ 0.28
COL9A3-208ENST00000469802 OR2T34Q8NGX1 318 aa16.77■□□□□ 0.28
COL9A3-208ENST00000469802 SPAG5Q96R06 1193 aa16.77■□□□□ 0.28
COL9A3-208ENST00000469802 TBCBQ99426 244 aa16.77■□□□□ 0.28
COL9A3-208ENST00000469802 TKTL2Q9H0I9 626 aa16.77■□□□□ 0.28
COL9A3-208ENST00000469802 PDCL3Q9H2J4 239 aa16.77■□□□□ 0.28
COL9A3-208ENST00000469802 EBF2Q9HAK2 575 aa16.77■□□□□ 0.28
COL9A3-208ENST00000469802 TM7SF3Q9NS93 570 aa16.77■□□□□ 0.28
COL9A3-208ENST00000469802 TMEM59LQ9UK28 342 aa16.77■□□□□ 0.28
COL9A3-208ENST00000469802 SNX11Q9Y5W9 270 aa16.77■□□□□ 0.28
COL9A3-208ENST00000469802 ZFHX4Q86UP3 3567 aa16.77■□□□□ 0.28
COL9A3-208ENST00000469802 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.76■□□□□ 0.27
COL9A3-208ENST00000469802 A0A1W2PPC4 97 aa16.76■□□□□ 0.27
COL9A3-208ENST00000469802 FAM221BA6H8Z2 402 aa16.76■□□□□ 0.27
COL9A3-208ENST00000469802 F9P00740 461 aa16.76■□□□□ 0.27
COL9A3-208ENST00000469802 MMEP08473 750 aa16.76■□□□□ 0.27
COL9A3-208ENST00000469802 GOT1P17174 413 aa16.76■□□□□ 0.27
COL9A3-208ENST00000469802 NNMTP40261 264 aa16.76■□□□□ 0.27
COL9A3-208ENST00000469802 CTSKP43235 329 aa16.76■□□□□ 0.27
COL9A3-208ENST00000469802 CCR5P51681 352 aa16.76■□□□□ 0.27
COL9A3-208ENST00000469802 JAM2P57087 298 aa16.76■□□□□ 0.27
COL9A3-208ENST00000469802 ZNF177Q13360 481 aaPredicted RBP16.76■□□□□ 0.27
COL9A3-208ENST00000469802 ALFQ53S48 1182 aa16.76■□□□□ 0.27
COL9A3-208ENST00000469802 C2CD6Q53TS8 623 aa16.76■□□□□ 0.27
COL9A3-208ENST00000469802 KCNT1Q5JUK3 1230 aa16.76■□□□□ 0.27
COL9A3-208ENST00000469802 ARCQ7LC44 396 aa16.76■□□□□ 0.27
COL9A3-208ENST00000469802 ERICH1Q86X53 443 aa16.76■□□□□ 0.27
COL9A3-208ENST00000469802 ZNF677Q86XU0 584 aa16.76■□□□□ 0.27
COL9A3-208ENST00000469802 KDF1Q8NAX2 398 aaPredicted RBP16.76■□□□□ 0.27
COL9A3-208ENST00000469802 GANCQ8TET4 914 aa16.76■□□□□ 0.27
COL9A3-208ENST00000469802 PPP1R9BQ96SB3 815 aa16.76■□□□□ 0.27
COL9A3-208ENST00000469802 OMDQ99983 421 aa16.76■□□□□ 0.27
COL9A3-208ENST00000469802 SIK2Q9H0K1 926 aa16.76■□□□□ 0.27
COL9A3-208ENST00000469802 WDCPQ9H6R7 721 aa16.76■□□□□ 0.27
COL9A3-208ENST00000469802 TMEM51Q9NW97 253 aa16.76■□□□□ 0.27
COL9A3-208ENST00000469802 SLC25A13Q9UJS0 675 aa16.76■□□□□ 0.27
COL9A3-208ENST00000469802 KLK13Q9UKR3 277 aa16.76■□□□□ 0.27
COL9A3-208ENST00000469802 HS3ST2Q9Y278 367 aa16.76■□□□□ 0.27
COL9A3-208ENST00000469802 ANKRD6Q9Y2G4 727 aa16.76■□□□□ 0.27
COL9A3-208ENST00000469802 ZZEF1O43149 2961 aa16.75■□□□□ 0.27
COL9A3-208ENST00000469802 IGLV3-10A0A075B6K4 115 aa16.75■□□□□ 0.27
COL9A3-208ENST00000469802 LRRC72A6NJI9 287 aa16.75■□□□□ 0.27
COL9A3-208ENST00000469802 EPHB6O15197 1021 aa16.75■□□□□ 0.27
COL9A3-208ENST00000469802 ALOX15BO15296 676 aa16.75■□□□□ 0.27
COL9A3-208ENST00000469802 FLRT2O43155 660 aa16.75■□□□□ 0.27
COL9A3-208ENST00000469802 CNTN5O94779 1100 aa16.75■□□□□ 0.27
COL9A3-208ENST00000469802 FTH1P19P0C7X4 201 aa16.75■□□□□ 0.27
COL9A3-208ENST00000469802 KLK7P49862 253 aa16.75■□□□□ 0.27
COL9A3-208ENST00000469802 METAP1P53582 386 aa16.75■□□□□ 0.27
COL9A3-208ENST00000469802 RNASE9P60153 205 aaKnown RBP16.75■□□□□ 0.27
COL9A3-208ENST00000469802 RACK1P63244 317 aaKnown RBP16.75■□□□□ 0.27
COL9A3-208ENST00000469802 DEUP1Q05D60 604 aa16.75■□□□□ 0.27
COL9A3-208ENST00000469802 SND1Q7KZF4 910 aaKnown RBP eCLIP16.75■□□□□ 0.273e-26■■□□□ 11.4
COL9A3-208ENST00000469802 SH2D3CQ8N5H7 860 aa16.75■□□□□ 0.27
COL9A3-208ENST00000469802 MSANTD4Q8NCY6 345 aa16.75■□□□□ 0.27
COL9A3-208ENST00000469802 SLC20A1Q8WUM9 679 aa16.75■□□□□ 0.27
COL9A3-208ENST00000469802 C1orf74Q96LT6 269 aa16.75■□□□□ 0.27
COL9A3-208ENST00000469802 SLC6A18Q96N87 628 aa16.75■□□□□ 0.27
COL9A3-208ENST00000469802 PSMB7Q99436 277 aa16.75■□□□□ 0.27
COL9A3-208ENST00000469802 ZNF212Q9UDV6 495 aa16.75■□□□□ 0.27
COL9A3-208ENST00000469802 VPS28Q9UK41 221 aa16.75■□□□□ 0.27
COL9A3-208ENST00000469802 TPX2Q9ULW0 747 aaKnown RBP16.75■□□□□ 0.27
COL9A3-208ENST00000469802 SIK3Q9Y2K2 1263 aa16.75■□□□□ 0.27
COL9A3-208ENST00000469802 MSRB2Q9Y3D2 182 aa16.75■□□□□ 0.27
COL9A3-208ENST00000469802 DAAM1Q9Y4D1 1078 aa16.75■□□□□ 0.27
COL9A3-208ENST00000469802 PAXBP1Q9Y5B6 917 aa16.75■□□□□ 0.27
COL9A3-208ENST00000469802 CHD6Q8TD26 2715 aa16.74■□□□□ 0.27
COL9A3-208ENST00000469802 CFAP47Q6ZTR5 3102 aa16.74■□□□□ 0.27
COL9A3-208ENST00000469802 TMEM8BA6NDV4 472 aa16.74■□□□□ 0.27
COL9A3-208ENST00000469802 FAM47DPA6NHR8 397 aa16.74■□□□□ 0.27
COL9A3-208ENST00000469802 DRGXA6NNA5 263 aa16.74■□□□□ 0.27
COL9A3-208ENST00000469802 VILLO15195 856 aa16.74■□□□□ 0.27
COL9A3-208ENST00000469802 LATO43561 262 aa16.74■□□□□ 0.27
COL9A3-208ENST00000469802 IL1BP01584 269 aa16.74■□□□□ 0.27
COL9A3-208ENST00000469802 CYP1A1P04798 512 aaPredicted RBP16.74■□□□□ 0.27
COL9A3-208ENST00000469802 FMO1Q01740 532 aa16.74■□□□□ 0.27
COL9A3-208ENST00000469802 CDR2Q01850 454 aa16.74■□□□□ 0.27
COL9A3-208ENST00000469802 ACBD5Q5T8D3 534 aaPredicted RBP16.74■□□□□ 0.27
COL9A3-208ENST00000469802 NAA35Q5VZE5 725 aa16.74■□□□□ 0.27
COL9A3-208ENST00000469802 SETD3Q86TU7 594 aaPredicted RBP16.74■□□□□ 0.27
COL9A3-208ENST00000469802 CPA5Q8WXQ8 436 aa16.74■□□□□ 0.27
COL9A3-208ENST00000469802 ADAMTS14Q8WXS8 1223 aa16.74■□□□□ 0.27
COL9A3-208ENST00000469802 VPS16Q9H269 839 aa16.74■□□□□ 0.27
COL9A3-208ENST00000469802 TMPRSS4Q9NRS4 437 aa16.74■□□□□ 0.27
COL9A3-208ENST00000469802 SARDHQ9UL12 918 aa16.74■□□□□ 0.27
COL9A3-208ENST00000469802 PCDHB9Q9Y5E1 797 aa16.74■□□□□ 0.27
COL9A3-208ENST00000469802 SNX10Q9Y5X0 201 aa16.74■□□□□ 0.27
COL9A3-208ENST00000469802 FAM170AA1A519 330 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms