RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 AUHQ13825 339 aaKnown RBP21.69■■□□□ 1.06
COL9A3-207ENST00000467819 TBC1D3GQ6DHY5 549 aa21.69■■□□□ 1.06
COL9A3-207ENST00000467819 TBC1D3CQ6IPX1 549 aa21.69■■□□□ 1.06
COL9A3-207ENST00000467819 C19orf48Q6RUI8 117 aa21.69■■□□□ 1.06
COL9A3-207ENST00000467819 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP21.69■■□□□ 1.06
COL9A3-207ENST00000467819 C11orf57Q6ZUT1 292 aaPredicted RBP21.69■■□□□ 1.06
COL9A3-207ENST00000467819 TBC1D3Q8IZP1 549 aaPredicted RBP21.69■■□□□ 1.06
COL9A3-207ENST00000467819 GALNT15Q8N3T1 639 aa21.69■■□□□ 1.06
COL9A3-207ENST00000467819 FRS2Q8WU20 508 aa21.69■■□□□ 1.06
COL9A3-207ENST00000467819 SERAC1Q96JX3 654 aa21.69■■□□□ 1.06
COL9A3-207ENST00000467819 NOX5Q96PH1 765 aa21.69■■□□□ 1.06
COL9A3-207ENST00000467819 SPAG5Q96R06 1193 aa21.69■■□□□ 1.06
COL9A3-207ENST00000467819 SLC25A13Q9UJS0 675 aa21.69■■□□□ 1.06
COL9A3-207ENST00000467819 A0A1W2PR77 199 aa21.68■■□□□ 1.06
COL9A3-207ENST00000467819 FAM149AA5PLN7 773 aa21.68■■□□□ 1.06
COL9A3-207ENST00000467819 ERBB2P04626 1255 aa21.68■■□□□ 1.06
COL9A3-207ENST00000467819 PNMA6AP0CW24 399 aaPredicted RBP21.68■■□□□ 1.06
COL9A3-207ENST00000467819 PLK1P53350 603 aa21.68■■□□□ 1.06
COL9A3-207ENST00000467819 OXCT1P55809 520 aa21.68■■□□□ 1.06
COL9A3-207ENST00000467819 PTK2Q05397 1052 aa21.68■■□□□ 1.06
COL9A3-207ENST00000467819 ACCSLQ4AC99 568 aa21.68■■□□□ 1.06
COL9A3-207ENST00000467819 OLFML1Q6UWY5 402 aa21.68■■□□□ 1.06
COL9A3-207ENST00000467819 DHRS13Q6UX07 377 aa21.68■■□□□ 1.06
COL9A3-207ENST00000467819 IRF2BP1Q8IU81 584 aa21.68■■□□□ 1.06
COL9A3-207ENST00000467819 OR52K2Q8NGK3 314 aa21.68■■□□□ 1.06
COL9A3-207ENST00000467819 OR8D1Q8WZ84 308 aa21.68■■□□□ 1.06
COL9A3-207ENST00000467819 SYNCQ9H7C4 482 aa21.68■■□□□ 1.06
COL9A3-207ENST00000467819 GDF3Q9NR23 364 aa21.68■■□□□ 1.06
COL9A3-207ENST00000467819 GPSM3Q9Y4H4 160 aa21.68■■□□□ 1.06
COL9A3-207ENST00000467819 HS3ST4Q9Y661 456 aa21.68■■□□□ 1.06
COL9A3-207ENST00000467819 KNTC1P50748 2209 aa21.68■■□□□ 1.06
COL9A3-207ENST00000467819 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.67■■□□□ 1.06
COL9A3-207ENST00000467819 GTPBP10A4D1E9 387 aaKnown RBP21.67■■□□□ 1.06
COL9A3-207ENST00000467819 C10orf142B7Z368 130 aa21.67■■□□□ 1.06
COL9A3-207ENST00000467819 CBX4O00257 560 aa21.67■■□□□ 1.06
COL9A3-207ENST00000467819 DAB1O75553 588 aa21.67■■□□□ 1.06
COL9A3-207ENST00000467819 KRT9P35527 623 aa21.67■■□□□ 1.06
COL9A3-207ENST00000467819 ZNF177Q13360 481 aaPredicted RBP21.67■■□□□ 1.06
COL9A3-207ENST00000467819 POM121L1PQ3SYA9 428 aa21.67■■□□□ 1.06
COL9A3-207ENST00000467819 PTPN20Q4JDL3 420 aa21.67■■□□□ 1.06
COL9A3-207ENST00000467819 ALG14Q96F25 216 aa21.67■■□□□ 1.06
COL9A3-207ENST00000467819 SIK2Q9H0K1 926 aa21.67■■□□□ 1.06
COL9A3-207ENST00000467819 SIX2Q9NPC8 291 aa21.67■■□□□ 1.06
COL9A3-207ENST00000467819 PLCB1Q9NQ66 1216 aa21.67■■□□□ 1.06
COL9A3-207ENST00000467819 VPS28Q9UK41 221 aa21.67■■□□□ 1.06
COL9A3-207ENST00000467819 SARDHQ9UL12 918 aa21.67■■□□□ 1.06
COL9A3-207ENST00000467819 BAHCC1Q9P281 2608 aa21.67■■□□□ 1.06
COL9A3-207ENST00000467819 URB1O60287 2271 aaKnown RBP21.67■■□□□ 1.06
COL9A3-207ENST00000467819 DOCK4Q8N1I0 1966 aa21.67■■□□□ 1.06
COL9A3-207ENST00000467819 ARID1BQ8NFD5 2236 aaPredicted RBP21.66■■□□□ 1.06
COL9A3-207ENST00000467819 M0QYT0 321 aa21.66■■□□□ 1.06
COL9A3-207ENST00000467819 BNIP3LO60238 219 aa21.66■■□□□ 1.06
COL9A3-207ENST00000467819 RTN2O75298 545 aa21.66■■□□□ 1.06
COL9A3-207ENST00000467819 ITGAVP06756 1048 aa21.66■■□□□ 1.06
COL9A3-207ENST00000467819 MAT2AP31153 395 aaKnown RBP21.66■■□□□ 1.06
COL9A3-207ENST00000467819 SLC6A3Q01959 620 aa21.66■■□□□ 1.06
COL9A3-207ENST00000467819 SHBQ15464 509 aa21.66■■□□□ 1.06
COL9A3-207ENST00000467819 TPD52L1Q16890 204 aaPredicted RBP21.66■■□□□ 1.06
COL9A3-207ENST00000467819 SLC45A4Q5BKX6 768 aa21.66■■□□□ 1.06
COL9A3-207ENST00000467819 Q6ZVU0 165 aa21.66■■□□□ 1.06
COL9A3-207ENST00000467819 DSG4Q86SJ6 1040 aa21.66■■□□□ 1.06
COL9A3-207ENST00000467819 C14orf80Q86SX3 495 aa21.66■■□□□ 1.06
COL9A3-207ENST00000467819 SLC47A2Q86VL8 602 aa21.66■■□□□ 1.06
COL9A3-207ENST00000467819 PPP1R9BQ96SB3 815 aa21.66■■□□□ 1.06
COL9A3-207ENST00000467819 FEM1AQ9BSK4 669 aa21.66■■□□□ 1.06
COL9A3-207ENST00000467819 DNAJC12Q9UKB3 198 aa21.66■■□□□ 1.06
COL9A3-207ENST00000467819 RAXQ9Y2V3 346 aa21.66■■□□□ 1.06
COL9A3-207ENST00000467819 MYLKQ15746 1914 aa21.66■■□□□ 1.06
COL9A3-207ENST00000467819 TDRD6O60522 2096 aaKnown RBP21.65■■□□□ 1.06
COL9A3-207ENST00000467819 FOXN3O00409 490 aaPredicted RBP21.65■■□□□ 1.06
COL9A3-207ENST00000467819 ENC1O14682 589 aa21.65■■□□□ 1.06
COL9A3-207ENST00000467819 ATP9BO43861 1147 aa21.65■■□□□ 1.06
COL9A3-207ENST00000467819 PAGE1O75459 146 aa21.65■■□□□ 1.06
COL9A3-207ENST00000467819 ZNF18P17022 549 aa21.65■■□□□ 1.06
COL9A3-207ENST00000467819 NOS2P35228 1153 aa21.65■■□□□ 1.06
COL9A3-207ENST00000467819 CLCN1P35523 988 aa21.65■■□□□ 1.06
COL9A3-207ENST00000467819 SNX16P57768 344 aa21.65■■□□□ 1.06
COL9A3-207ENST00000467819 DLG2Q15700 870 aa21.65■■□□□ 1.06
COL9A3-207ENST00000467819 SMAD1Q15797 465 aaKnown RBP21.65■■□□□ 1.06
COL9A3-207ENST00000467819 OTUD1Q5VV17 481 aaPredicted RBP21.65■■□□□ 1.06
COL9A3-207ENST00000467819 NAPEPLDQ6IQ20 393 aa21.65■■□□□ 1.06
COL9A3-207ENST00000467819 SLC26A9Q7LBE3 791 aa21.65■■□□□ 1.06
COL9A3-207ENST00000467819 CNDP2Q96KP4 475 aaKnown RBP21.65■■□□□ 1.06
COL9A3-207ENST00000467819 TPX2Q9ULW0 747 aaKnown RBP21.65■■□□□ 1.06
COL9A3-207ENST00000467819 FAM170AA1A519 330 aa21.64■■□□□ 1.05
COL9A3-207ENST00000467819 TRABD2BA6NFA1 517 aa21.64■■□□□ 1.05
COL9A3-207ENST00000467819 TLR4O00206 839 aa21.64■■□□□ 1.05
COL9A3-207ENST00000467819 LATO43561 262 aa21.64■■□□□ 1.05
COL9A3-207ENST00000467819 CLDN11O75508 207 aa21.64■■□□□ 1.05
COL9A3-207ENST00000467819 LDOC1O95751 146 aaPredicted RBP21.64■■□□□ 1.05
COL9A3-207ENST00000467819 NXPH1P58417 271 aa21.64■■□□□ 1.05
COL9A3-207ENST00000467819 RNASE9P60153 205 aaKnown RBP21.64■■□□□ 1.05
COL9A3-207ENST00000467819 UBE2HP62256 183 aa21.64■■□□□ 1.05
COL9A3-207ENST00000467819 CYP4F3Q08477 520 aa21.64■■□□□ 1.05
COL9A3-207ENST00000467819 CNTN1Q12860 1018 aa21.64■■□□□ 1.05
COL9A3-207ENST00000467819 MTA1Q13330 715 aa21.64■■□□□ 1.05
COL9A3-207ENST00000467819 COL28A1Q2UY09 1125 aa21.64■■□□□ 1.05
COL9A3-207ENST00000467819 FAM46CQ5VWP2 391 aa21.64■■□□□ 1.05
COL9A3-207ENST00000467819 PRPF39Q86UA1 669 aaKnown RBP21.64■■□□□ 1.05
COL9A3-207ENST00000467819 SH2D3CQ8N5H7 860 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms