RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 STK19P49842 368 aaPredicted RBP10.58□□□□□ -0.72
HDAC3-203ENST00000467533 CLDN2P57739 230 aa10.58□□□□□ -0.72
HDAC3-203ENST00000467533 ECT2LQ008S8 904 aa10.58□□□□□ -0.72
HDAC3-203ENST00000467533 CNTN1Q12860 1018 aa10.58□□□□□ -0.72
HDAC3-203ENST00000467533 PIK3R6Q5UE93 754 aa10.58□□□□□ -0.72
HDAC3-203ENST00000467533 AGBL4Q5VU57 503 aa10.58□□□□□ -0.72
HDAC3-203ENST00000467533 ZNF787Q6DD87 383 aa10.58□□□□□ -0.72
HDAC3-203ENST00000467533 OR6B2Q6IFH4 312 aa10.58□□□□□ -0.72
HDAC3-203ENST00000467533 GCNT7Q6ZNI0 430 aa10.58□□□□□ -0.72
HDAC3-203ENST00000467533 MMS22LQ6ZRQ5 1243 aa10.58□□□□□ -0.72
HDAC3-203ENST00000467533 ZFAND4Q86XD8 727 aa10.58□□□□□ -0.72
HDAC3-203ENST00000467533 XXYLT1Q8NBI6 393 aa10.58□□□□□ -0.72
HDAC3-203ENST00000467533 HJURPQ8NCD3 748 aaPredicted RBP10.58□□□□□ -0.72
HDAC3-203ENST00000467533 C9orf43Q8TAL5 461 aaPredicted RBP10.58□□□□□ -0.72
HDAC3-203ENST00000467533 FIBINQ8TAL6 211 aa10.58□□□□□ -0.72
HDAC3-203ENST00000467533 RNF139Q8WU17 664 aa10.58□□□□□ -0.72
HDAC3-203ENST00000467533 OR8D1Q8WZ84 308 aa10.58□□□□□ -0.72
HDAC3-203ENST00000467533 PTPRN2Q92932 1015 aa10.58□□□□□ -0.72
HDAC3-203ENST00000467533 FAM131CQ96AQ9 280 aa10.58□□□□□ -0.72
HDAC3-203ENST00000467533 LMLNQ96KR4 655 aa10.58□□□□□ -0.72
HDAC3-203ENST00000467533 RPL10LQ96L21 214 aaKnown RBP10.58□□□□□ -0.72
HDAC3-203ENST00000467533 SPAG5Q96R06 1193 aa10.58□□□□□ -0.72
HDAC3-203ENST00000467533 IL12RB2Q99665 862 aa10.58□□□□□ -0.72
HDAC3-203ENST00000467533 DUSP16Q9BY84 665 aa10.58□□□□□ -0.72
HDAC3-203ENST00000467533 FOXP3Q9BZS1 431 aa10.58□□□□□ -0.72
HDAC3-203ENST00000467533 ZNF71Q9NQZ8 489 aaPredicted RBP10.58□□□□□ -0.72
HDAC3-203ENST00000467533 AGPAT3Q9NRZ7 376 aa10.58□□□□□ -0.72
HDAC3-203ENST00000467533 SLCO3A1Q9UIG8 710 aa10.58□□□□□ -0.72
HDAC3-203ENST00000467533 SALL4Q9UJQ4 1053 aa10.58□□□□□ -0.72
HDAC3-203ENST00000467533 PRAMEF33A0A0G2JMD5 474 aa10.57□□□□□ -0.72
HDAC3-203ENST00000467533 GOLGA6L7A0A1B0GV03 622 aa10.57□□□□□ -0.72
HDAC3-203ENST00000467533 A0A1W2PQU0 124 aa10.57□□□□□ -0.72
HDAC3-203ENST00000467533 C1QTNF3-AMACRE9PGA6 284 aa10.57□□□□□ -0.72
HDAC3-203ENST00000467533 AGRPO00253 132 aa10.57□□□□□ -0.72
HDAC3-203ENST00000467533 CLIC2O15247 247 aa10.57□□□□□ -0.72
HDAC3-203ENST00000467533 NVLO15381 856 aaKnown RBP10.57□□□□□ -0.72
HDAC3-203ENST00000467533 IRAK2O43187 625 aa10.57□□□□□ -0.72
HDAC3-203ENST00000467533 MTSS1O43312 755 aa10.57□□□□□ -0.72
HDAC3-203ENST00000467533 PRAMEF10O60809 474 aa10.57□□□□□ -0.72
HDAC3-203ENST00000467533 VAV1P15498 845 aa10.57□□□□□ -0.72
HDAC3-203ENST00000467533 ELAVL4P26378 380 aaKnown RBP10.57□□□□□ -0.72
HDAC3-203ENST00000467533 SLC6A4P31645 630 aa10.57□□□□□ -0.72
HDAC3-203ENST00000467533 NNMTP40261 264 aa10.57□□□□□ -0.72
HDAC3-203ENST00000467533 FHL5Q5TD97 284 aa10.57□□□□□ -0.72
HDAC3-203ENST00000467533 FAM46CQ5VWP2 391 aa10.57□□□□□ -0.72
HDAC3-203ENST00000467533 RRAGBQ5VZM2 374 aa10.57□□□□□ -0.72
HDAC3-203ENST00000467533 CCDC65Q8IXS2 484 aa10.57□□□□□ -0.72
HDAC3-203ENST00000467533 LMX1AQ8TE12 382 aa10.57□□□□□ -0.72
HDAC3-203ENST00000467533 SSC4DQ8WTU2 575 aa10.57□□□□□ -0.72
HDAC3-203ENST00000467533 EPSTI1Q96J88 318 aa10.57□□□□□ -0.72
HDAC3-203ENST00000467533 PPP1R13BQ96KQ4 1090 aa10.57□□□□□ -0.72
HDAC3-203ENST00000467533 PRICKLE1Q96MT3 831 aaPredicted RBP10.57□□□□□ -0.72
HDAC3-203ENST00000467533 NT5C1AQ9BXI3 368 aa10.57□□□□□ -0.72
HDAC3-203ENST00000467533 LOXL2Q9Y4K0 774 aa10.57□□□□□ -0.72
HDAC3-203ENST00000467533 CSNK1G3Q9Y6M4 447 aa10.57□□□□□ -0.72
HDAC3-203ENST00000467533 CENPEQ02224 2701 aa10.57□□□□□ -0.72
HDAC3-203ENST00000467533 D6RAR5 112 aa10.56□□□□□ -0.72
HDAC3-203ENST00000467533 TMX2-CTNND1H3BSU7 103 aa10.56□□□□□ -0.72
HDAC3-203ENST00000467533 VNN1O95497 513 aa10.56□□□□□ -0.72
HDAC3-203ENST00000467533 BMP15O95972 392 aa10.56□□□□□ -0.72
HDAC3-203ENST00000467533 CSF2P04141 144 aa10.56□□□□□ -0.72
HDAC3-203ENST00000467533 NME1P15531 152 aaKnown RBP10.56□□□□□ -0.72
HDAC3-203ENST00000467533 ITIH1P19827 911 aa10.56□□□□□ -0.72
HDAC3-203ENST00000467533 TXLNAP40222 546 aa10.56□□□□□ -0.72
HDAC3-203ENST00000467533 ASPAP45381 313 aa10.56□□□□□ -0.72
HDAC3-203ENST00000467533 UQCRFS1P47985 274 aa10.56□□□□□ -0.72
HDAC3-203ENST00000467533 CD97P48960 835 aa10.56□□□□□ -0.72
HDAC3-203ENST00000467533 SLC11A2P49281 568 aa10.56□□□□□ -0.72
HDAC3-203ENST00000467533 NUMBP49757 651 aa10.56□□□□□ -0.72
HDAC3-203ENST00000467533 AP3M2P53677 418 aa10.56□□□□□ -0.72
HDAC3-203ENST00000467533 INCA1Q0VD86 236 aa10.56□□□□□ -0.72
HDAC3-203ENST00000467533 FAM133BQ5BKY9 247 aaKnown RBP10.56□□□□□ -0.72
HDAC3-203ENST00000467533 PPP1R26Q5T8A7 1209 aaPredicted RBP10.56□□□□□ -0.72
HDAC3-203ENST00000467533 SPOPLQ6IQ16 392 aa10.56□□□□□ -0.72
HDAC3-203ENST00000467533 Q6ZSR6 202 aa10.56□□□□□ -0.72
HDAC3-203ENST00000467533 ABI3BPQ7Z7G0 1075 aa10.56□□□□□ -0.72
HDAC3-203ENST00000467533 PARGQ86W56 976 aa10.56□□□□□ -0.72
HDAC3-203ENST00000467533 DCP2Q8IU60 420 aaKnown RBP10.56□□□□□ -0.72
HDAC3-203ENST00000467533 SLC35F3Q8IY50 421 aa10.56□□□□□ -0.72
HDAC3-203ENST00000467533 EDEM1Q92611 657 aa10.56□□□□□ -0.72
HDAC3-203ENST00000467533 GFM1Q96RP9 751 aaKnown RBP10.56□□□□□ -0.72
HDAC3-203ENST00000467533 IRX2Q9BZI1 471 aaPredicted RBP10.56□□□□□ -0.72
HDAC3-203ENST00000467533 ULBP1Q9BZM6 244 aa10.56□□□□□ -0.72
HDAC3-203ENST00000467533 DNAI2Q9GZS0 605 aa10.56□□□□□ -0.72
HDAC3-203ENST00000467533 FOXJ2Q9P0K8 574 aa10.56□□□□□ -0.72
HDAC3-203ENST00000467533 SARDHQ9UL12 918 aa10.56□□□□□ -0.72
HDAC3-203ENST00000467533 VPS37CA5D8V6 355 aaPredicted RBP10.55□□□□□ -0.72
HDAC3-203ENST00000467533 LRRIQ3A6PVS8 624 aaPredicted RBP10.55□□□□□ -0.72
HDAC3-203ENST00000467533 NTN3O00634 580 aaPredicted RBP10.55□□□□□ -0.72
HDAC3-203ENST00000467533 TPP1O14773 563 aa10.55□□□□□ -0.72
HDAC3-203ENST00000467533 EIF3DO15371 548 aaKnown RBP eCLIP10.55□□□□□ -0.72
HDAC3-203ENST00000467533 ACSL4O60488 711 aa10.55□□□□□ -0.72
HDAC3-203ENST00000467533 ZBED1O96006 694 aa10.55□□□□□ -0.72
HDAC3-203ENST00000467533 KRT7P08729 469 aa10.55□□□□□ -0.72
HDAC3-203ENST00000467533 ZNF18P17022 549 aa10.55□□□□□ -0.72
HDAC3-203ENST00000467533 JUNDP17535 347 aa10.55□□□□□ -0.72
HDAC3-203ENST00000467533 CD58P19256 250 aa10.55□□□□□ -0.72
HDAC3-203ENST00000467533 NOS2P35228 1153 aa10.55□□□□□ -0.72
HDAC3-203ENST00000467533 HOXD13P35453 343 aa10.55□□□□□ -0.72
HDAC3-203ENST00000467533 PIK3CAP42336 1068 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms