RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 NFRKBQ6P4R8 1299 aa4.16□□□□□ -1.74
VPS50-209ENST00000467326 KLHL17Q6TDP4 642 aa4.16□□□□□ -1.74
VPS50-209ENST00000467326 CYB5R4Q7L1T6 521 aa4.16□□□□□ -1.74
VPS50-209ENST00000467326 RAB11FIP2Q7L804 512 aa4.16□□□□□ -1.74
VPS50-209ENST00000467326 ZSCAN30Q86W11 494 aa4.16□□□□□ -1.74
VPS50-209ENST00000467326 TTC30BQ8N4P2 665 aa4.16□□□□□ -1.74
VPS50-209ENST00000467326 ATG16L2Q8NAA4 619 aa4.16□□□□□ -1.74
VPS50-209ENST00000467326 OR1N1Q8NGS0 311 aa4.16□□□□□ -1.74
VPS50-209ENST00000467326 EID2BQ96D98 161 aa4.16□□□□□ -1.74
VPS50-209ENST00000467326 KRTAP1-5Q9BYS1 174 aa4.16□□□□□ -1.74
VPS50-209ENST00000467326 PRDM8Q9NQV8 689 aa4.16□□□□□ -1.74
VPS50-209ENST00000467326 LIN7CQ9NUP9 197 aaKnown RBP4.16□□□□□ -1.74
VPS50-209ENST00000467326 PCDHA12Q9UN75 941 aa4.16□□□□□ -1.74
VPS50-209ENST00000467326 TMEM272A0A1B0GTI8 110 aa4.15□□□□□ -1.75
VPS50-209ENST00000467326 CXorf65A6NEN9 183 aa4.15□□□□□ -1.75
VPS50-209ENST00000467326 EFCAB8A8MWE9 144 aa4.15□□□□□ -1.75
VPS50-209ENST00000467326 ZC3H11AO75152 810 aaKnown RBP eCLIP4.15□□□□□ -1.75
VPS50-209ENST00000467326 NDUFB8O95169 186 aa4.15□□□□□ -1.75
VPS50-209ENST00000467326 OAZ2O95190 189 aa4.15□□□□□ -1.75
VPS50-209ENST00000467326 EPN2O95208 641 aa4.15□□□□□ -1.75
VPS50-209ENST00000467326 CRYABP02511 175 aaKnown RBP4.15□□□□□ -1.75
VPS50-209ENST00000467326 TNFAIP3P21580 790 aa4.15□□□□□ -1.75
VPS50-209ENST00000467326 GAD2Q05329 585 aa4.15□□□□□ -1.75
VPS50-209ENST00000467326 BLMHQ13867 455 aa4.15□□□□□ -1.75
VPS50-209ENST00000467326 GALNT3Q14435 633 aa4.15□□□□□ -1.75
VPS50-209ENST00000467326 PRTGQ2VWP7 1150 aa4.15□□□□□ -1.75
VPS50-209ENST00000467326 ARL13AQ5H913 290 aaPredicted RBP4.15□□□□□ -1.75
VPS50-209ENST00000467326 MANEAQ5SRI9 462 aa4.15□□□□□ -1.75
VPS50-209ENST00000467326 PDXDC1Q6P996 788 aa4.15□□□□□ -1.75
VPS50-209ENST00000467326 RTL10Q7L3V2 364 aa4.15□□□□□ -1.75
VPS50-209ENST00000467326 TRAPPC11Q7Z392 1133 aa4.15□□□□□ -1.75
VPS50-209ENST00000467326 MDGA2Q7Z553 956 aa4.15□□□□□ -1.75
VPS50-209ENST00000467326 SLC44A2Q8IWA5 706 aaPredicted RBP4.15□□□□□ -1.75
VPS50-209ENST00000467326 NKAPQ8N5F7 415 aaKnown RBP4.15□□□□□ -1.75
VPS50-209ENST00000467326 EXD3Q8N9H8 876 aa4.15□□□□□ -1.75
VPS50-209ENST00000467326 NAXEQ8NCW5 288 aa4.15□□□□□ -1.75
VPS50-209ENST00000467326 CLEC4CQ8WTT0 213 aa4.15□□□□□ -1.75
VPS50-209ENST00000467326 NSMCE1Q8WV22 266 aa4.15□□□□□ -1.75
VPS50-209ENST00000467326 POF1BQ8WVV4 589 aa4.15□□□□□ -1.75
VPS50-209ENST00000467326 ATP2A3Q93084 1043 aa4.15□□□□□ -1.75
VPS50-209ENST00000467326 SLC25A28Q96A46 364 aa4.15□□□□□ -1.75
VPS50-209ENST00000467326 ADAD1Q96M93 576 aaKnown RBP4.15□□□□□ -1.75
VPS50-209ENST00000467326 WDR83Q9BRX9 315 aaKnown RBP4.15□□□□□ -1.75
VPS50-209ENST00000467326 WACQ9BTA9 647 aa4.15□□□□□ -1.75
VPS50-209ENST00000467326 SORBS1Q9BX66 1292 aaKnown RBP4.15□□□□□ -1.75
VPS50-209ENST00000467326 EBF3Q9H4W6 596 aa4.15□□□□□ -1.75
VPS50-209ENST00000467326 ELAC1Q9H777 363 aaKnown RBP4.15□□□□□ -1.75
VPS50-209ENST00000467326 RASSF1Q9NS23 344 aa4.15□□□□□ -1.75
VPS50-209ENST00000467326 DACT1Q9NYF0 836 aa4.15□□□□□ -1.75
VPS50-209ENST00000467326 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.15□□□□□ -1.75
VPS50-209ENST00000467326 HERC5Q9UII4 1024 aaKnown RBP4.15□□□□□ -1.75
VPS50-209ENST00000467326 DAPP1Q9UN19 280 aa4.15□□□□□ -1.75
VPS50-209ENST00000467326 C19orf53Q9UNZ5 99 aaPredicted RBP4.15□□□□□ -1.75
VPS50-209ENST00000467326 LAMP3Q9UQV4 416 aa4.15□□□□□ -1.75
VPS50-209ENST00000467326 TTLL3Q9Y4R7 772 aa4.15□□□□□ -1.75
VPS50-209ENST00000467326 ITIH6Q6UXX5 1313 aa4.15□□□□□ -1.75
VPS50-209ENST00000467326 AGAP5A6NIR3 686 aa4.14□□□□□ -1.75
VPS50-209ENST00000467326 CD8B2A6NJW9 211 aa4.14□□□□□ -1.75
VPS50-209ENST00000467326 A6NNC1 897 aa4.14□□□□□ -1.75
VPS50-209ENST00000467326 MCIDASD6RGH6 385 aa4.14□□□□□ -1.75
VPS50-209ENST00000467326 K7ENM7 598 aa4.14□□□□□ -1.75
VPS50-209ENST00000467326 MSI1O43347 362 aaKnown RBP4.14□□□□□ -1.75
VPS50-209ENST00000467326 KCNAB3O43448 404 aa4.14□□□□□ -1.75
VPS50-209ENST00000467326 AGR2O95994 175 aa4.14□□□□□ -1.75
VPS50-209ENST00000467326 CSTBP04080 98 aaKnown RBP4.14□□□□□ -1.75
VPS50-209ENST00000467326 SERPINF1P36955 418 aa4.14□□□□□ -1.75
VPS50-209ENST00000467326 MAPK9P45984 424 aa4.14□□□□□ -1.75
VPS50-209ENST00000467326 RCAN1P53805 252 aa4.14□□□□□ -1.75
VPS50-209ENST00000467326 POLE2P56282 527 aa4.14□□□□□ -1.75
VPS50-209ENST00000467326 LINC00205P59089 165 aa4.14□□□□□ -1.75
VPS50-209ENST00000467326 AP2B1P63010 937 aa4.14□□□□□ -1.75
VPS50-209ENST00000467326 FHL1Q13642 323 aa4.14□□□□□ -1.75
VPS50-209ENST00000467326 RPS6KA2Q15349 733 aa4.14□□□□□ -1.75
VPS50-209ENST00000467326 TAF11Q15544 211 aa4.14□□□□□ -1.75
VPS50-209ENST00000467326 TBRG1Q3YBR2 411 aa4.14□□□□□ -1.75
VPS50-209ENST00000467326 CCDC184Q52MB2 194 aa4.14□□□□□ -1.75
VPS50-209ENST00000467326 WDR45BQ5MNZ6 344 aa4.14□□□□□ -1.75
VPS50-209ENST00000467326 PIK3CD-AS1Q5SR53 167 aa4.14□□□□□ -1.75
VPS50-209ENST00000467326 TTC39AQ5SRH9 613 aa4.14□□□□□ -1.75
VPS50-209ENST00000467326 C10orf76Q5T2E6 689 aa4.14□□□□□ -1.75
VPS50-209ENST00000467326 TTC22Q5TAA0 569 aa4.14□□□□□ -1.75
VPS50-209ENST00000467326 DAB2IPQ5VWQ8 1189 aa4.14□□□□□ -1.75
VPS50-209ENST00000467326 SULT6B1Q6IMI4 303 aa4.14□□□□□ -1.75
VPS50-209ENST00000467326 LVRNQ6Q4G3 990 aa4.14□□□□□ -1.75
VPS50-209ENST00000467326 TMEM199Q8N511 208 aa4.14□□□□□ -1.75
VPS50-209ENST00000467326 SLC2A12Q8TD20 617 aa4.14□□□□□ -1.75
VPS50-209ENST00000467326 CPT1BQ92523 772 aa4.14□□□□□ -1.75
VPS50-209ENST00000467326 MSI2Q96DH6 328 aaKnown RBP4.14□□□□□ -1.75
VPS50-209ENST00000467326 LTV1Q96GA3 475 aaPredicted RBP4.14□□□□□ -1.75
VPS50-209ENST00000467326 BRD8Q9H0E9 1235 aa4.14□□□□□ -1.75
VPS50-209ENST00000467326 ALDH8A1Q9H2A2 487 aaPredicted RBP4.14□□□□□ -1.75
VPS50-209ENST00000467326 RETREG1Q9H6L5 497 aa4.14□□□□□ -1.75
VPS50-209ENST00000467326 TXNRD2Q9NNW7 524 aa4.14□□□□□ -1.75
VPS50-209ENST00000467326 RIC8AQ9NPQ8 531 aa4.14□□□□□ -1.75
VPS50-209ENST00000467326 CWC25Q9NXE8 425 aaPredicted RBP4.14□□□□□ -1.75
VPS50-209ENST00000467326 TNFSF13BQ9Y275 285 aa4.14□□□□□ -1.75
VPS50-209ENST00000467326 PRSS47A8MTI9 375 aa4.13□□□□□ -1.75
VPS50-209ENST00000467326 FOXO6A8MYZ6 492 aa4.13□□□□□ -1.75
VPS50-209ENST00000467326 J3KRW8 73 aa4.13□□□□□ -1.75
VPS50-209ENST00000467326 INSIG1O15503 277 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms