RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 ADIPOR2Q86V24 386 aa15.57■□□□□ 0.08
NPHP4-205ENST00000466897 ARHGAP12Q8IWW6 846 aa15.57■□□□□ 0.08
NPHP4-205ENST00000466897 PLD5Q8N7P1 536 aa15.57■□□□□ 0.08
NPHP4-205ENST00000466897 CCDC26Q8TAB7 109 aa15.57■□□□□ 0.08
NPHP4-205ENST00000466897 KCNV2Q8TDN2 545 aa15.57■□□□□ 0.08
NPHP4-205ENST00000466897 ARHGEF2Q92974 986 aaKnown RBP15.57■□□□□ 0.08
NPHP4-205ENST00000466897 TTC17Q96AE7 1141 aa15.57■□□□□ 0.08
NPHP4-205ENST00000466897 ACDQ96AP0 544 aa15.57■□□□□ 0.08
NPHP4-205ENST00000466897 PBKQ96KB5 322 aa15.57■□□□□ 0.08
NPHP4-205ENST00000466897 NELL2Q99435 816 aa15.57■□□□□ 0.08
NPHP4-205ENST00000466897 NAPGQ99747 312 aaPredicted RBP15.57■□□□□ 0.08
NPHP4-205ENST00000466897 OSBPL6Q9BZF3 934 aa15.57■□□□□ 0.08
NPHP4-205ENST00000466897 ETNK2Q9NVF9 386 aa15.57■□□□□ 0.08
NPHP4-205ENST00000466897 INTS6Q9UL03 887 aaKnown RBP15.57■□□□□ 0.08
NPHP4-205ENST00000466897 CA14Q9ULX7 337 aa15.57■□□□□ 0.08
NPHP4-205ENST00000466897 SNX12Q9UMY4 172 aa15.57■□□□□ 0.08
NPHP4-205ENST00000466897 STARD13Q9Y3M8 1113 aa15.57■□□□□ 0.08
NPHP4-205ENST00000466897 NCAM2O15394 837 aa15.56■□□□□ 0.08
NPHP4-205ENST00000466897 CST8O60676 142 aa15.56■□□□□ 0.08
NPHP4-205ENST00000466897 KRT10P13645 584 aa15.56■□□□□ 0.08
NPHP4-205ENST00000466897 TCP1P17987 556 aaKnown RBP15.56■□□□□ 0.08
NPHP4-205ENST00000466897 KDSRQ06136 332 aa15.56■□□□□ 0.08
NPHP4-205ENST00000466897 SULT2A1Q06520 285 aa15.56■□□□□ 0.08
NPHP4-205ENST00000466897 GALNT2Q10471 571 aa15.56■□□□□ 0.08
NPHP4-205ENST00000466897 KLF1Q13351 362 aaPredicted RBP15.56■□□□□ 0.08
NPHP4-205ENST00000466897 PON2Q15165 354 aa15.56■□□□□ 0.08
NPHP4-205ENST00000466897 FUT11Q495W5 492 aa15.56■□□□□ 0.08
NPHP4-205ENST00000466897 RNF219Q5W0B1 726 aaPredicted RBP15.56■□□□□ 0.08
NPHP4-205ENST00000466897 NAIF1Q69YI7 327 aaPredicted RBP15.56■□□□□ 0.08
NPHP4-205ENST00000466897 FSTL4Q6MZW2 842 aa15.56■□□□□ 0.08
NPHP4-205ENST00000466897 BZW1Q7L1Q6 419 aaKnown RBP15.56■□□□□ 0.08
NPHP4-205ENST00000466897 RFX6Q8HWS3 928 aa15.56■□□□□ 0.08
NPHP4-205ENST00000466897 SIX5Q8N196 739 aa15.56■□□□□ 0.08
NPHP4-205ENST00000466897 ZNF687Q8N1G0 1237 aa15.56■□□□□ 0.08
NPHP4-205ENST00000466897 C2orf49Q9BVC5 232 aaPredicted RBP15.56■□□□□ 0.08
NPHP4-205ENST00000466897 MUC3BQ9H195 1237 aa15.56■□□□□ 0.08
NPHP4-205ENST00000466897 TTC7AQ9ULT0 858 aaPredicted RBP15.56■□□□□ 0.08
NPHP4-205ENST00000466897 CKAP5Q14008 2032 aa15.56■□□□□ 0.08
NPHP4-205ENST00000466897 MYO18AQ92614 2054 aaKnown RBP15.56■□□□□ 0.08
NPHP4-205ENST00000466897 MUC3AQ02505 3323 aa15.55■□□□□ 0.08
NPHP4-205ENST00000466897 TTC28Q96AY4 2481 aa15.55■□□□□ 0.08
NPHP4-205ENST00000466897 A0A0D9SEW6 157 aa15.55■□□□□ 0.08
NPHP4-205ENST00000466897 KANSL1LA0AUZ9 987 aa15.55■□□□□ 0.08
NPHP4-205ENST00000466897 ZSCAN5CA6NGD5 496 aaPredicted RBP15.55■□□□□ 0.08
NPHP4-205ENST00000466897 ARHGAP42A6NI28 874 aa15.55■□□□□ 0.08
NPHP4-205ENST00000466897 RASA4BC9J798 803 aa15.55■□□□□ 0.08
NPHP4-205ENST00000466897 APOC4-APOC2K7ER74 178 aa15.55■□□□□ 0.08
NPHP4-205ENST00000466897 NPC1O15118 1278 aa15.55■□□□□ 0.08
NPHP4-205ENST00000466897 TRIM24O15164 1050 aa15.55■□□□□ 0.08
NPHP4-205ENST00000466897 RASA4O43374 803 aa15.55■□□□□ 0.08
NPHP4-205ENST00000466897 MFSD11O43934 449 aa15.55■□□□□ 0.08
NPHP4-205ENST00000466897 APOC2P02655 101 aa15.55■□□□□ 0.08
NPHP4-205ENST00000466897 ASLP04424 464 aa15.55■□□□□ 0.08
NPHP4-205ENST00000466897 MX2P20592 715 aa15.55■□□□□ 0.08
NPHP4-205ENST00000466897 MZF1P28698 734 aaPredicted RBP15.55■□□□□ 0.08
NPHP4-205ENST00000466897 DNA2P51530 1060 aa15.55■□□□□ 0.08
NPHP4-205ENST00000466897 ZNF33AQ06730 810 aa15.55■□□□□ 0.08
NPHP4-205ENST00000466897 MESP2Q0VG99 397 aa15.55■□□□□ 0.08
NPHP4-205ENST00000466897 ZNF211Q13398 564 aaPredicted RBP15.55■□□□□ 0.08
NPHP4-205ENST00000466897 SERINC3Q13530 473 aa15.55■□□□□ 0.08
NPHP4-205ENST00000466897 CCINQ13939 588 aa15.55■□□□□ 0.08
NPHP4-205ENST00000466897 TMEM215Q68D42 235 aa15.55■□□□□ 0.08
NPHP4-205ENST00000466897 SYNPOQ8N3V7 929 aa15.55■□□□□ 0.08
NPHP4-205ENST00000466897 RASGEF1CQ8N431 466 aa15.55■□□□□ 0.08
NPHP4-205ENST00000466897 KDM1BQ8NB78 822 aa15.55■□□□□ 0.08
NPHP4-205ENST00000466897 FATE1Q969F0 183 aa15.55■□□□□ 0.08
NPHP4-205ENST00000466897 OLFM3Q96PB7 478 aa15.55■□□□□ 0.08
NPHP4-205ENST00000466897 OSBPL9Q96SU4 736 aa15.55■□□□□ 0.08
NPHP4-205ENST00000466897 PSMB7Q99436 277 aa15.55■□□□□ 0.08
NPHP4-205ENST00000466897 SLC39A8Q9C0K1 460 aa15.55■□□□□ 0.08
NPHP4-205ENST00000466897 FBRSL1Q9HCM7 1045 aaKnown RBP15.55■□□□□ 0.08
NPHP4-205ENST00000466897 LTB4R2Q9NPC1 389 aa15.55■□□□□ 0.08
NPHP4-205ENST00000466897 DTLQ9NZJ0 730 aa15.55■□□□□ 0.08
NPHP4-205ENST00000466897 VPS28Q9UK41 221 aa15.55■□□□□ 0.08
NPHP4-205ENST00000466897 TECTAO75443 2155 aa15.54■□□□□ 0.08
NPHP4-205ENST00000466897 TBC1D3BA6NDS4 549 aa15.54■□□□□ 0.08
NPHP4-205ENST00000466897 PRRT4C9JH25 899 aa15.54■□□□□ 0.08
NPHP4-205ENST00000466897 K7EQS6 105 aa15.54■□□□□ 0.08
NPHP4-205ENST00000466897 FANCGO15287 622 aa15.54■□□□□ 0.08
NPHP4-205ENST00000466897 KDELR3O43731 214 aa15.54■□□□□ 0.08
NPHP4-205ENST00000466897 ATP5BP06576 529 aaKnown RBP15.54■□□□□ 0.08
NPHP4-205ENST00000466897 CHRM1P11229 460 aaPredicted RBP15.54■□□□□ 0.08
NPHP4-205ENST00000466897 HNRNPLP14866 589 aaKnown RBP eCLIP15.54■□□□□ 0.08
NPHP4-205ENST00000466897 POLR2EP19388 210 aaKnown RBP15.54■□□□□ 0.08
NPHP4-205ENST00000466897 GEMIN4P57678 1058 aaKnown RBP15.54■□□□□ 0.08
NPHP4-205ENST00000466897 GBE1Q04446 702 aa15.54■□□□□ 0.08
NPHP4-205ENST00000466897 ADCY2Q08462 1091 aa15.54■□□□□ 0.08
NPHP4-205ENST00000466897 HSF5Q4G112 596 aaPredicted RBP15.54■□□□□ 0.08
NPHP4-205ENST00000466897 DGKKQ5KSL6 1271 aa15.54■□□□□ 0.08
NPHP4-205ENST00000466897 KAZNQ674X7 775 aa15.54■□□□□ 0.08
NPHP4-205ENST00000466897 MBLAC2Q68D91 279 aa15.54■□□□□ 0.08
NPHP4-205ENST00000466897 AADACL2Q6P093 401 aa15.54■□□□□ 0.08
NPHP4-205ENST00000466897 METTL3Q86U44 580 aaKnown RBP15.54■□□□□ 0.08
NPHP4-205ENST00000466897 SLC13A5Q86YT5 568 aaPredicted RBP15.54■□□□□ 0.08
NPHP4-205ENST00000466897 APCDD1Q8J025 514 aa15.54■□□□□ 0.08
NPHP4-205ENST00000466897 TTC13Q8NBP0 860 aa15.54■□□□□ 0.08
NPHP4-205ENST00000466897 OR7D4Q8NG98 312 aa15.54■□□□□ 0.08
NPHP4-205ENST00000466897 UCMAQ8WVF2 138 aa15.54■□□□□ 0.08
NPHP4-205ENST00000466897 EZH1Q92800 747 aaPredicted RBP15.54■□□□□ 0.08
NPHP4-205ENST00000466897 HDAC11Q96DB2 347 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms