RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 ZNF284Q2VY69 593 aa3.28□□□□□ -1.88
GTF3C3-209ENST00000466862 KRTAP24-1Q3LI83 254 aa3.28□□□□□ -1.88
GTF3C3-209ENST00000466862 VWA5B1Q5TIE3 1220 aa3.28□□□□□ -1.88
GTF3C3-209ENST00000466862 ERAP2Q6P179 960 aa3.28□□□□□ -1.88
GTF3C3-209ENST00000466862 C16orf82Q7Z2V1 217 aa3.28□□□□□ -1.88
GTF3C3-209ENST00000466862 ARMC9Q7Z3E5 817 aa3.28□□□□□ -1.88
GTF3C3-209ENST00000466862 ZNF329Q86UD4 541 aa3.28□□□□□ -1.88
GTF3C3-209ENST00000466862 NR2C2APQ86WQ0 139 aa3.28□□□□□ -1.88
GTF3C3-209ENST00000466862 CCDC25Q86WR0 208 aa3.28□□□□□ -1.88
GTF3C3-209ENST00000466862 KLBQ86Z14 1044 aa3.28□□□□□ -1.88
GTF3C3-209ENST00000466862 TMEM217Q8N7C4 229 aa3.28□□□□□ -1.88
GTF3C3-209ENST00000466862 FAM110DQ8TAY7 271 aaPredicted RBP3.28□□□□□ -1.88
GTF3C3-209ENST00000466862 DNASE2BQ8WZ79 361 aa3.28□□□□□ -1.88
GTF3C3-209ENST00000466862 NR4A3Q92570 626 aa3.28□□□□□ -1.88
GTF3C3-209ENST00000466862 C8orf48Q96LL4 319 aa3.28□□□□□ -1.88
GTF3C3-209ENST00000466862 APOLD1Q96LR9 279 aa3.28□□□□□ -1.88
GTF3C3-209ENST00000466862 POLDIP3Q9BY77 421 aaKnown RBP3.28□□□□□ -1.88
GTF3C3-209ENST00000466862 C6orf106Q9H6K1 298 aaPredicted RBP3.28□□□□□ -1.88
GTF3C3-209ENST00000466862 Q9N2J8 555 aa3.28□□□□□ -1.88
GTF3C3-209ENST00000466862 SLC22A11Q9NSA0 550 aa3.28□□□□□ -1.88
GTF3C3-209ENST00000466862 KCNG2Q9UJ96 466 aa3.28□□□□□ -1.88
GTF3C3-209ENST00000466862 SLC39A10Q9ULF5 831 aa3.28□□□□□ -1.88
GTF3C3-209ENST00000466862 SLC12A4Q9UP95 1085 aa3.28□□□□□ -1.88
GTF3C3-209ENST00000466862 LDB2O43679 373 aa3.27□□□□□ -1.89
GTF3C3-209ENST00000466862 ASNA1O43681 348 aa3.27□□□□□ -1.89
GTF3C3-209ENST00000466862 DDNO94850 711 aaPredicted RBP3.27□□□□□ -1.89
GTF3C3-209ENST00000466862 PKMP14618 531 aaKnown RBP3.27□□□□□ -1.89
GTF3C3-209ENST00000466862 ZNF12P17014 697 aa3.27□□□□□ -1.89
GTF3C3-209ENST00000466862 PMS2P54278 862 aa3.27□□□□□ -1.89
GTF3C3-209ENST00000466862 KRTAP27-1Q3LI81 207 aa3.27□□□□□ -1.89
GTF3C3-209ENST00000466862 DNTTIP2Q5QJE6 756 aaKnown RBP3.27□□□□□ -1.89
GTF3C3-209ENST00000466862 FNBP1LQ5T0N5 605 aa3.27□□□□□ -1.89
GTF3C3-209ENST00000466862 OTUD1Q5VV17 481 aaPredicted RBP3.27□□□□□ -1.89
GTF3C3-209ENST00000466862 RINT1Q6NUQ1 792 aa3.27□□□□□ -1.89
GTF3C3-209ENST00000466862 AAGABQ6PD74 315 aa3.27□□□□□ -1.89
GTF3C3-209ENST00000466862 SLC30A9Q6PML9 568 aa3.27□□□□□ -1.89
GTF3C3-209ENST00000466862 CLIP4Q8N3C7 705 aa3.27□□□□□ -1.89
GTF3C3-209ENST00000466862 ZBTB8BQ8NAP8 495 aaPredicted RBP3.27□□□□□ -1.89
GTF3C3-209ENST00000466862 SORBS1Q9BX66 1292 aaKnown RBP3.27□□□□□ -1.89
GTF3C3-209ENST00000466862 TM6SF1Q9BZW5 370 aa3.27□□□□□ -1.89
GTF3C3-209ENST00000466862 CATSPERBQ9H7T0 1116 aa3.27□□□□□ -1.89
GTF3C3-209ENST00000466862 ACTR5Q9H9F9 607 aaPredicted RBP3.27□□□□□ -1.89
GTF3C3-209ENST00000466862 PLSCR4Q9NRQ2 329 aa3.27□□□□□ -1.89
GTF3C3-209ENST00000466862 FNIP2Q9P278 1114 aa3.27□□□□□ -1.89
GTF3C3-209ENST00000466862 CNTN6Q9UQ52 1028 aa3.27□□□□□ -1.89
GTF3C3-209ENST00000466862 PCDHGB1Q9Y5G3 927 aa3.27□□□□□ -1.89
GTF3C3-209ENST00000466862 PIP5K1BO14986 540 aa3.26□□□□□ -1.89
GTF3C3-209ENST00000466862 DNPH1O43598 174 aa3.26□□□□□ -1.89
GTF3C3-209ENST00000466862 HEXIM1O94992 359 aaKnown RBP3.26□□□□□ -1.89
GTF3C3-209ENST00000466862 PARNO95453 639 aaKnown RBP3.26□□□□□ -1.89
GTF3C3-209ENST00000466862 IGKV3-20P01619 116 aa3.26□□□□□ -1.89
GTF3C3-209ENST00000466862 FCGR1AP12314 374 aa3.26□□□□□ -1.89
GTF3C3-209ENST00000466862 UNGP13051 313 aaPredicted RBP3.26□□□□□ -1.89
GTF3C3-209ENST00000466862 ITGB8P26012 769 aa3.26□□□□□ -1.89
GTF3C3-209ENST00000466862 CHRNA5P30532 468 aa3.26□□□□□ -1.89
GTF3C3-209ENST00000466862 AKT1P31749 480 aa3.26□□□□□ -1.89
GTF3C3-209ENST00000466862 ERVFC1-1P60608 527 aa3.26□□□□□ -1.89
GTF3C3-209ENST00000466862 ILF3Q12906 894 aaKnown RBP eCLIP3.26□□□□□ -1.89
GTF3C3-209ENST00000466862 TRAF3Q13114 568 aa3.26□□□□□ -1.89
GTF3C3-209ENST00000466862 BTBD16Q32M84 506 aa3.26□□□□□ -1.89
GTF3C3-209ENST00000466862 PLK5Q496M5 336 aa3.26□□□□□ -1.89
GTF3C3-209ENST00000466862 PRAMEF19Q5SWL8 479 aa3.26□□□□□ -1.89
GTF3C3-209ENST00000466862 GFI1BQ5VTD9 330 aa3.26□□□□□ -1.89
GTF3C3-209ENST00000466862 KIAA1324Q6UXG2 1013 aaKnown RBP3.26□□□□□ -1.89
GTF3C3-209ENST00000466862 FAM217AQ8IXS0 508 aa3.26□□□□□ -1.89
GTF3C3-209ENST00000466862 NRSN1Q8IZ57 195 aa3.26□□□□□ -1.89
GTF3C3-209ENST00000466862 LRRC57Q8N9N7 239 aa3.26□□□□□ -1.89
GTF3C3-209ENST00000466862 CMASQ8NFW8 434 aaPredicted RBP3.26□□□□□ -1.89
GTF3C3-209ENST00000466862 OR1N1Q8NGS0 311 aa3.26□□□□□ -1.89
GTF3C3-209ENST00000466862 SLC2A12Q8TD20 617 aa3.26□□□□□ -1.89
GTF3C3-209ENST00000466862 WDR60Q8WVS4 1066 aa3.26□□□□□ -1.89
GTF3C3-209ENST00000466862 CCDC134Q9H6E4 229 aa3.26□□□□□ -1.89
GTF3C3-209ENST00000466862 CERS4Q9HA82 394 aa3.26□□□□□ -1.89
GTF3C3-209ENST00000466862 TMEM248Q9NWD8 314 aa3.26□□□□□ -1.89
GTF3C3-209ENST00000466862 ZDHHC7Q9NXF8 308 aa3.26□□□□□ -1.89
GTF3C3-209ENST00000466862 DOCK7Q96N67 2140 aa3.25□□□□□ -1.89
GTF3C3-209ENST00000466862 AQP12BA6NM10 295 aa3.25□□□□□ -1.89
GTF3C3-209ENST00000466862 BTBD18B2RXH4 712 aa3.25□□□□□ -1.89
GTF3C3-209ENST00000466862 KIF3BO15066 747 aa3.25□□□□□ -1.89
GTF3C3-209ENST00000466862 GLUD1P00367 558 aa3.25□□□□□ -1.89
GTF3C3-209ENST00000466862 PRPH2P23942 346 aa3.25□□□□□ -1.89
GTF3C3-209ENST00000466862 PPP3CCP48454 512 aa3.25□□□□□ -1.89
GTF3C3-209ENST00000466862 GLUD2P49448 558 aa3.25□□□□□ -1.89
GTF3C3-209ENST00000466862 COMPP49747 757 aaPredicted RBP3.25□□□□□ -1.89
GTF3C3-209ENST00000466862 CDK7P50613 346 aa3.25□□□□□ -1.89
GTF3C3-209ENST00000466862 KRTAP10-5P60370 271 aa3.25□□□□□ -1.89
GTF3C3-209ENST00000466862 SEC61A1P61619 476 aaKnown RBP3.25□□□□□ -1.89
GTF3C3-209ENST00000466862 IZUMO4Q1ZYL8 232 aa3.25□□□□□ -1.89
GTF3C3-209ENST00000466862 FAM76BQ5HYJ3 339 aa3.25□□□□□ -1.89
GTF3C3-209ENST00000466862 ZNF367Q7RTV3 350 aa3.25□□□□□ -1.89
GTF3C3-209ENST00000466862 FAM185AQ8N0U4 392 aa3.25□□□□□ -1.89
GTF3C3-209ENST00000466862 ENDOVQ8N8Q3 282 aaKnown RBP3.25□□□□□ -1.89
GTF3C3-209ENST00000466862 RSC1A1Q92681 617 aa3.25□□□□□ -1.89
GTF3C3-209ENST00000466862 SGCZQ96LD1 299 aa3.25□□□□□ -1.89
GTF3C3-209ENST00000466862 TMEM120AQ9BXJ8 343 aa3.25□□□□□ -1.89
GTF3C3-209ENST00000466862 KRTAP4-4Q9BYR3 166 aa3.25□□□□□ -1.89
GTF3C3-209ENST00000466862 METTL14Q9HCE5 456 aaKnown RBP3.25□□□□□ -1.89
GTF3C3-209ENST00000466862 ARL15Q9NXU5 204 aa3.25□□□□□ -1.89
GTF3C3-209ENST00000466862 PHTF1Q9UMS5 762 aa3.25□□□□□ -1.89
GTF3C3-209ENST00000466862 SLC4A4Q9Y6R1 1079 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms