RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 BTBD19C9JJ37 291 aa13.26□□□□□ -0.29
PDZRN3-205ENST00000466780 IRF6O14896 467 aa13.26□□□□□ -0.29
PDZRN3-205ENST00000466780 CFLARO15519 480 aa13.26□□□□□ -0.29
PDZRN3-205ENST00000466780 GRID2O43424 1007 aa13.26□□□□□ -0.29
PDZRN3-205ENST00000466780 SETSIPP0DME0 302 aa13.26□□□□□ -0.29
PDZRN3-205ENST00000466780 TGFB3P10600 412 aa13.26□□□□□ -0.29
PDZRN3-205ENST00000466780 HPCAP84074 193 aa13.26□□□□□ -0.29
PDZRN3-205ENST00000466780 CREB5Q02930 508 aa13.26□□□□□ -0.29
PDZRN3-205ENST00000466780 TMEM198Q66K66 360 aa13.26□□□□□ -0.29
PDZRN3-205ENST00000466780 TP53INP2Q8IXH6 220 aa13.26□□□□□ -0.29
PDZRN3-205ENST00000466780 ZNF567Q8N184 647 aa13.26□□□□□ -0.29
PDZRN3-205ENST00000466780 GALNT4Q8N4A0 578 aa13.26□□□□□ -0.29
PDZRN3-205ENST00000466780 OR52K1Q8NGK4 314 aa13.26□□□□□ -0.29
PDZRN3-205ENST00000466780 RP9Q8TA86 221 aaKnown RBP13.26□□□□□ -0.29
PDZRN3-205ENST00000466780 SLC7A14Q8TBB6 771 aa13.26□□□□□ -0.29
PDZRN3-205ENST00000466780 ZNF669Q96BR6 464 aaPredicted RBP13.26□□□□□ -0.29
PDZRN3-205ENST00000466780 CXCL16Q9H2A7 254 aa13.26□□□□□ -0.29
PDZRN3-205ENST00000466780 TMPRSS4Q9NRS4 437 aa13.26□□□□□ -0.29
PDZRN3-205ENST00000466780 PRMT7Q9NVM4 692 aaPredicted RBP13.26□□□□□ -0.29
PDZRN3-205ENST00000466780 DMTF1Q9Y222 760 aa13.26□□□□□ -0.29
PDZRN3-205ENST00000466780 ZNF638Q14966 1978 aaKnown RBP13.26□□□□□ -0.29
PDZRN3-205ENST00000466780 PPEF2O14830 753 aa13.26□□□□□ -0.29
PDZRN3-205ENST00000466780 HCRTO43612 131 aa13.26□□□□□ -0.29
PDZRN3-205ENST00000466780 STRNO43815 780 aa13.26□□□□□ -0.29
PDZRN3-205ENST00000466780 USP12O75317 370 aa13.26□□□□□ -0.29
PDZRN3-205ENST00000466780 STAU1O95793 577 aaKnown RBP13.26□□□□□ -0.29
PDZRN3-205ENST00000466780 C2P06681 752 aa13.26□□□□□ -0.29
PDZRN3-205ENST00000466780 SPRP35270 261 aaPredicted RBP13.26□□□□□ -0.29
PDZRN3-205ENST00000466780 TNFAIP2Q03169 654 aa13.26□□□□□ -0.29
PDZRN3-205ENST00000466780 CYLC2Q14093 348 aaPredicted RBP13.26□□□□□ -0.29
PDZRN3-205ENST00000466780 SLC26A9Q7LBE3 791 aa13.26□□□□□ -0.29
PDZRN3-205ENST00000466780 PLPPR4Q7Z2D5 763 aa13.26□□□□□ -0.29
PDZRN3-205ENST00000466780 EXOC8Q8IYI6 725 aa13.26□□□□□ -0.29
PDZRN3-205ENST00000466780 CPSF7Q8N684 471 aaKnown RBP13.26□□□□□ -0.29
PDZRN3-205ENST00000466780 CATSPER1Q8NEC5 780 aa13.26□□□□□ -0.29
PDZRN3-205ENST00000466780 SLC2A11Q9BYW1 496 aa13.26□□□□□ -0.29
PDZRN3-205ENST00000466780 ILKAPQ9H0C8 392 aaPredicted RBP13.26□□□□□ -0.29
PDZRN3-205ENST00000466780 R3HDMLQ9H3Y0 253 aa13.26□□□□□ -0.29
PDZRN3-205ENST00000466780 PRDM16Q9HAZ2 1276 aa13.26□□□□□ -0.29
PDZRN3-205ENST00000466780 NMRAL1Q9HBL8 299 aa13.26□□□□□ -0.29
PDZRN3-205ENST00000466780 OXSMQ9NWU1 459 aa13.26□□□□□ -0.29
PDZRN3-205ENST00000466780 ZCWPW2A0A1B0GU75 182 aa13.25□□□□□ -0.29
PDZRN3-205ENST00000466780 KPNA7A9QM74 516 aa13.25□□□□□ -0.29
PDZRN3-205ENST00000466780 HDAC3O15379 428 aa13.25□□□□□ -0.29
PDZRN3-205ENST00000466780 JUNP05412 331 aaKnown RBP13.25□□□□□ -0.29
PDZRN3-205ENST00000466780 FAM58BPP0C7Q3 252 aa13.25□□□□□ -0.29
PDZRN3-205ENST00000466780 FAM200BP0CF97 657 aa13.25□□□□□ -0.29
PDZRN3-205ENST00000466780 CDK4P11802 303 aa13.25□□□□□ -0.29
PDZRN3-205ENST00000466780 ENO3P13929 434 aaPredicted RBP13.25□□□□□ -0.29
PDZRN3-205ENST00000466780 SLC5A2P31639 672 aa13.25□□□□□ -0.29
PDZRN3-205ENST00000466780 BAG6P46379 1132 aa13.25□□□□□ -0.29
PDZRN3-205ENST00000466780 FAM131BQ86XD5 332 aa13.25□□□□□ -0.29
PDZRN3-205ENST00000466780 PGAM4Q8N0Y7 254 aa13.25□□□□□ -0.29
PDZRN3-205ENST00000466780 C7orf31Q8N865 590 aa13.25□□□□□ -0.29
PDZRN3-205ENST00000466780 TMEM102Q8N9M5 508 aaPredicted RBP13.25□□□□□ -0.29
PDZRN3-205ENST00000466780 URGCPQ8TCY9 931 aa13.25□□□□□ -0.29
PDZRN3-205ENST00000466780 NUF2Q9BZD4 464 aa13.25□□□□□ -0.29
PDZRN3-205ENST00000466780 RAP2CQ9Y3L5 183 aa13.25□□□□□ -0.29
PDZRN3-205ENST00000466780 AK5Q9Y6K8 562 aa13.25□□□□□ -0.29
PDZRN3-205ENST00000466780 A0A087WZ62 844 aa13.25□□□□□ -0.29
PDZRN3-205ENST00000466780 NOP56O00567 594 aaKnown RBP13.25□□□□□ -0.29
PDZRN3-205ENST00000466780 ACOT8O14734 319 aa13.25□□□□□ -0.29
PDZRN3-205ENST00000466780 MPOP05164 745 aa13.25□□□□□ -0.29
PDZRN3-205ENST00000466780 SBK3P0C264 359 aa13.25□□□□□ -0.29
PDZRN3-205ENST00000466780 ARF4P18085 180 aaPredicted RBP13.25□□□□□ -0.29
PDZRN3-205ENST00000466780 ARL4AP40617 200 aa13.25□□□□□ -0.29
PDZRN3-205ENST00000466780 GLUD2P49448 558 aa13.25□□□□□ -0.29
PDZRN3-205ENST00000466780 CLCN2P51788 898 aa13.25□□□□□ -0.29
PDZRN3-205ENST00000466780 PGGT1BP53609 377 aa13.25□□□□□ -0.29
PDZRN3-205ENST00000466780 OLFML2BQ68BL8 750 aa13.25□□□□□ -0.29
PDZRN3-205ENST00000466780 ZDHHC17Q8IUH5 632 aa13.25□□□□□ -0.29
PDZRN3-205ENST00000466780 TMEM151AQ8N4L1 468 aa13.25□□□□□ -0.29
PDZRN3-205ENST00000466780 TTC39CQ8N584 583 aa13.25□□□□□ -0.29
PDZRN3-205ENST00000466780 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.25□□□□□ -0.29
PDZRN3-205ENST00000466780 SLC16A10Q8TF71 515 aa13.25□□□□□ -0.29
PDZRN3-205ENST00000466780 ITFG2Q969R8 447 aa13.25□□□□□ -0.29
PDZRN3-205ENST00000466780 MARK4Q96L34 752 aa13.25□□□□□ -0.29
PDZRN3-205ENST00000466780 CATSPER2Q96P56 530 aa13.25□□□□□ -0.29
PDZRN3-205ENST00000466780 FDXACB1Q9BRP7 624 aaPredicted RBP13.25□□□□□ -0.29
PDZRN3-205ENST00000466780 DPEP3Q9H4B8 488 aa13.25□□□□□ -0.29
PDZRN3-205ENST00000466780 PRDM12Q9H4Q4 367 aa13.25□□□□□ -0.29
PDZRN3-205ENST00000466780 WDR41Q9HAD4 459 aa13.25□□□□□ -0.29
PDZRN3-205ENST00000466780 TK2O00142 265 aa13.24□□□□□ -0.29
PDZRN3-205ENST00000466780 RNASEH2AO75792 299 aaKnown RBP13.24□□□□□ -0.29
PDZRN3-205ENST00000466780 BCAS2O75934 225 aaPredicted RBP13.24□□□□□ -0.29
PDZRN3-205ENST00000466780 LCP1P13796 627 aa13.24□□□□□ -0.29
PDZRN3-205ENST00000466780 PPARGP37231 505 aaPredicted RBP13.24□□□□□ -0.29
PDZRN3-205ENST00000466780 RPL14P50914 215 aaKnown RBP13.24□□□□□ -0.29
PDZRN3-205ENST00000466780 NSUN2Q08J23 767 aaKnown RBP eCLIP13.24□□□□□ -0.29
PDZRN3-205ENST00000466780 PPP2R5DQ14738 602 aa13.24□□□□□ -0.29
PDZRN3-205ENST00000466780 FAM187BQ17R55 369 aa13.24□□□□□ -0.29
PDZRN3-205ENST00000466780 HSP90AA5PQ58FG0 334 aa13.24□□□□□ -0.29
PDZRN3-205ENST00000466780 ARL13AQ5H913 290 aaPredicted RBP13.24□□□□□ -0.29
PDZRN3-205ENST00000466780 CELF3Q5SZQ8 465 aaKnown RBP13.24□□□□□ -0.29
PDZRN3-205ENST00000466780 SEL1L3Q68CR1 1132 aa13.24□□□□□ -0.29
PDZRN3-205ENST00000466780 AMIGO2Q86SJ2 522 aa13.24□□□□□ -0.29
PDZRN3-205ENST00000466780 TMEM135Q86UB9 458 aa13.24□□□□□ -0.29
PDZRN3-205ENST00000466780 ZNF410Q86VK4 478 aa13.24□□□□□ -0.29
PDZRN3-205ENST00000466780 CCNYQ8ND76 341 aa13.24□□□□□ -0.29
PDZRN3-205ENST00000466780 KLRG1Q96E93 195 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms