RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 WNT1P04628 370 aa19.71■□□□□ 0.75
COL9A3-206ENST00000466532 CD38P28907 300 aa19.71■□□□□ 0.75
COL9A3-206ENST00000466532 NOS2P35228 1153 aa19.71■□□□□ 0.75
COL9A3-206ENST00000466532 DRD3P35462 400 aa19.71■□□□□ 0.75
COL9A3-206ENST00000466532 ZNF177Q13360 481 aaPredicted RBP19.71■□□□□ 0.75
COL9A3-206ENST00000466532 INAVAQ3KP66 663 aa19.71■□□□□ 0.75
COL9A3-206ENST00000466532 ACCSLQ4AC99 568 aa19.71■□□□□ 0.75
COL9A3-206ENST00000466532 TMPRSS7Q7RTY8 843 aa19.71■□□□□ 0.75
COL9A3-206ENST00000466532 FAM114A1Q8IWE2 563 aa19.71■□□□□ 0.75
COL9A3-206ENST00000466532 OR52K2Q8NGK3 314 aa19.71■□□□□ 0.75
COL9A3-206ENST00000466532 OR8D1Q8WZ84 308 aa19.71■□□□□ 0.75
COL9A3-206ENST00000466532 ALG14Q96F25 216 aa19.71■□□□□ 0.75
COL9A3-206ENST00000466532 FEM1AQ9BSK4 669 aa19.71■□□□□ 0.75
COL9A3-206ENST00000466532 ANKRD11Q6UB99 2663 aaPredicted RBP19.71■□□□□ 0.75
COL9A3-206ENST00000466532 DSPP15924 2871 aaKnown RBP19.71■□□□□ 0.75
COL9A3-206ENST00000466532 MYLKQ15746 1914 aa19.7■□□□□ 0.74
COL9A3-206ENST00000466532 FREM2Q5SZK8 3169 aa19.7■□□□□ 0.74
COL9A3-206ENST00000466532 TBC1D3DA0A087WVF3 549 aa19.7■□□□□ 0.74
COL9A3-206ENST00000466532 TBC1D3IA0A087WXS9 549 aa19.7■□□□□ 0.74
COL9A3-206ENST00000466532 TBC1D3EA0A087X179 549 aa19.7■□□□□ 0.74
COL9A3-206ENST00000466532 TBC1D3KA0A087X1G2 549 aa19.7■□□□□ 0.74
COL9A3-206ENST00000466532 TBC1D3FA6NER0 549 aaPredicted RBP19.7■□□□□ 0.74
COL9A3-206ENST00000466532 C10orf142B7Z368 130 aa19.7■□□□□ 0.74
COL9A3-206ENST00000466532 TBC1D3LB9A6J9 549 aa19.7■□□□□ 0.74
COL9A3-206ENST00000466532 WNT9AO14904 365 aa19.7■□□□□ 0.74
COL9A3-206ENST00000466532 PAGE1O75459 146 aa19.7■□□□□ 0.74
COL9A3-206ENST00000466532 TBC1D3HP0C7X1 549 aa19.7■□□□□ 0.74
COL9A3-206ENST00000466532 PRKCSHP14314 528 aaPredicted RBP19.7■□□□□ 0.74
COL9A3-206ENST00000466532 VASPP50552 380 aaPredicted RBP19.7■□□□□ 0.74
COL9A3-206ENST00000466532 METAP1P53582 386 aa19.7■□□□□ 0.74
COL9A3-206ENST00000466532 PPP2CBP62714 309 aa19.7■□□□□ 0.74
COL9A3-206ENST00000466532 PPP2CAP67775 309 aa19.7■□□□□ 0.74
COL9A3-206ENST00000466532 PRAMEF14Q5SWL7 426 aa19.7■□□□□ 0.74
COL9A3-206ENST00000466532 TBC1D3GQ6DHY5 549 aa19.7■□□□□ 0.74
COL9A3-206ENST00000466532 TBC1D3CQ6IPX1 549 aa19.7■□□□□ 0.74
COL9A3-206ENST00000466532 DSG4Q86SJ6 1040 aa19.7■□□□□ 0.74
COL9A3-206ENST00000466532 C14orf80Q86SX3 495 aa19.7■□□□□ 0.74
COL9A3-206ENST00000466532 FAM71AQ8IYT1 594 aa19.7■□□□□ 0.74
COL9A3-206ENST00000466532 TBC1D3Q8IZP1 549 aaPredicted RBP19.7■□□□□ 0.74
COL9A3-206ENST00000466532 ZNF397Q8NF99 534 aaPredicted RBP19.7■□□□□ 0.74
COL9A3-206ENST00000466532 SERAC1Q96JX3 654 aa19.7■□□□□ 0.74
COL9A3-206ENST00000466532 ELF4Q99607 663 aaPredicted RBP19.7■□□□□ 0.74
COL9A3-206ENST00000466532 SIK2Q9H0K1 926 aa19.7■□□□□ 0.74
COL9A3-206ENST00000466532 PDCL3Q9H2J4 239 aa19.7■□□□□ 0.74
COL9A3-206ENST00000466532 NDST4Q9H3R1 872 aa19.7■□□□□ 0.74
COL9A3-206ENST00000466532 CCDC86Q9H6F5 360 aaKnown RBP19.7■□□□□ 0.74
COL9A3-206ENST00000466532 PIGVQ9NUD9 493 aa19.7■□□□□ 0.74
COL9A3-206ENST00000466532 VPS28Q9UK41 221 aa19.7■□□□□ 0.74
COL9A3-206ENST00000466532 TPX2Q9ULW0 747 aaKnown RBP19.7■□□□□ 0.74
COL9A3-206ENST00000466532 TDRD6O60522 2096 aaKnown RBP19.69■□□□□ 0.74
COL9A3-206ENST00000466532 A0A1W2PR77 199 aa19.69■□□□□ 0.74
COL9A3-206ENST00000466532 PLK4O00444 970 aa19.69■□□□□ 0.74
COL9A3-206ENST00000466532 ATP9BO43861 1147 aa19.69■□□□□ 0.74
COL9A3-206ENST00000466532 CLDN11O75508 207 aa19.69■□□□□ 0.74
COL9A3-206ENST00000466532 BPIFB4P59827 614 aa19.69■□□□□ 0.74
COL9A3-206ENST00000466532 RNASE9P60153 205 aaKnown RBP19.69■□□□□ 0.74
COL9A3-206ENST00000466532 DLG2Q15700 870 aa19.69■□□□□ 0.74
COL9A3-206ENST00000466532 VWA3BQ502W6 1294 aa19.69■□□□□ 0.74
COL9A3-206ENST00000466532 CCDC157Q569K6 752 aa19.69■□□□□ 0.74
COL9A3-206ENST00000466532 HSP90AA4PQ58FG1 418 aa19.69■□□□□ 0.74
COL9A3-206ENST00000466532 OTUD1Q5VV17 481 aaPredicted RBP19.69■□□□□ 0.74
COL9A3-206ENST00000466532 GATAD2AQ86YP4 633 aa19.69■□□□□ 0.74
COL9A3-206ENST00000466532 ZDHHC17Q8IUH5 632 aa19.69■□□□□ 0.74
COL9A3-206ENST00000466532 NPY6RQ99463 290 aa19.69■□□□□ 0.74
COL9A3-206ENST00000466532 TUBGCP2Q9BSJ2 902 aa19.69■□□□□ 0.74
COL9A3-206ENST00000466532 RRN3Q9NYV6 651 aa19.69■□□□□ 0.74
COL9A3-206ENST00000466532 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.69■□□□□ 0.74
COL9A3-206ENST00000466532 FTSJ1Q9UET6 329 aa19.69■□□□□ 0.74
COL9A3-206ENST00000466532 SARDHQ9UL12 918 aa19.69■□□□□ 0.74
COL9A3-206ENST00000466532 OR51B4Q9Y5P0 310 aa19.69■□□□□ 0.74
COL9A3-206ENST00000466532 RTN2O75298 545 aa19.68■□□□□ 0.74
COL9A3-206ENST00000466532 ZNF18P17022 549 aa19.68■□□□□ 0.74
COL9A3-206ENST00000466532 SULT1E1P49888 294 aa19.68■□□□□ 0.74
COL9A3-206ENST00000466532 CDH4P55283 916 aa19.68■□□□□ 0.74
COL9A3-206ENST00000466532 RAPGEF1Q13905 1077 aa19.68■□□□□ 0.74
COL9A3-206ENST00000466532 C5orf22Q49AR2 442 aa19.68■□□□□ 0.74
COL9A3-206ENST00000466532 SLC45A4Q5BKX6 768 aa19.68■□□□□ 0.74
COL9A3-206ENST00000466532 MIIPQ5JXC2 388 aa19.68■□□□□ 0.74
COL9A3-206ENST00000466532 BRMS1LQ5PSV4 323 aa19.68■□□□□ 0.74
COL9A3-206ENST00000466532 FAM46CQ5VWP2 391 aa19.68■□□□□ 0.74
COL9A3-206ENST00000466532 Q6ZVU0 165 aa19.68■□□□□ 0.74
COL9A3-206ENST00000466532 GALNT15Q8N3T1 639 aa19.68■□□□□ 0.74
COL9A3-206ENST00000466532 TMEM35BQ8NCS4 154 aa19.68■□□□□ 0.74
COL9A3-206ENST00000466532 FAM131CQ96AQ9 280 aa19.68■□□□□ 0.74
COL9A3-206ENST00000466532 TKTL2Q9H0I9 626 aa19.68■□□□□ 0.74
COL9A3-206ENST00000466532 MUC3BQ9H195 1237 aa19.68■□□□□ 0.74
COL9A3-206ENST00000466532 KDM4CQ9H3R0 1056 aa19.68■□□□□ 0.74
COL9A3-206ENST00000466532 CLSTN2Q9H4D0 955 aa19.68■□□□□ 0.74
COL9A3-206ENST00000466532 WDCPQ9H6R7 721 aa19.68■□□□□ 0.74
COL9A3-206ENST00000466532 GDF3Q9NR23 364 aa19.68■□□□□ 0.74
COL9A3-206ENST00000466532 STAP1Q9ULZ2 295 aa19.68■□□□□ 0.74
COL9A3-206ENST00000466532 TBC1D30Q9Y2I9 924 aa19.68■□□□□ 0.74
COL9A3-206ENST00000466532 C1QTNF3-AMACRE9PGA6 284 aa19.67■□□□□ 0.74
COL9A3-206ENST00000466532 ALOX15BO15296 676 aa19.67■□□□□ 0.74
COL9A3-206ENST00000466532 SLC7A4O43246 635 aa19.67■□□□□ 0.74
COL9A3-206ENST00000466532 LATO43561 262 aa19.67■□□□□ 0.74
COL9A3-206ENST00000466532 PLRG1O43660 514 aaKnown RBP19.67■□□□□ 0.74
COL9A3-206ENST00000466532 BNIP3LO60238 219 aa19.67■□□□□ 0.74
COL9A3-206ENST00000466532 CNTN5O94779 1100 aa19.67■□□□□ 0.74
COL9A3-206ENST00000466532 ADCY5O95622 1261 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms