RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 MAGED2Q9UNF1 606 aaPredicted RBP18.68■□□□□ 0.58
COL9A3-205ENST00000466192 CCT8L1PA6NM43 557 aa18.67■□□□□ 0.58
COL9A3-205ENST00000466192 USP12O75317 370 aa18.67■□□□□ 0.58
COL9A3-205ENST00000466192 AP2A1O95782 977 aa18.67■□□□□ 0.58
COL9A3-205ENST00000466192 CCNCP24863 283 aa18.67■□□□□ 0.58
COL9A3-205ENST00000466192 ADRA1DP25100 572 aa18.67■□□□□ 0.58
COL9A3-205ENST00000466192 RFC2P35250 354 aa18.67■□□□□ 0.58
COL9A3-205ENST00000466192 DEFB103AP81534 67 aa18.67■□□□□ 0.58
COL9A3-205ENST00000466192 PDK4Q16654 411 aa18.67■□□□□ 0.58
COL9A3-205ENST00000466192 TTC39BQ5VTQ0 682 aaPredicted RBP18.67■□□□□ 0.58
COL9A3-205ENST00000466192 KCTD11Q693B1 232 aa18.67■□□□□ 0.58
COL9A3-205ENST00000466192 CGB2Q6NT52 195 aa18.67■□□□□ 0.58
COL9A3-205ENST00000466192 SPATA21Q7Z572 469 aa18.67■□□□□ 0.58
COL9A3-205ENST00000466192 MICALL1Q8N3F8 863 aa18.67■□□□□ 0.58
COL9A3-205ENST00000466192 ATPAF2Q8N5M1 289 aa18.67■□□□□ 0.58
COL9A3-205ENST00000466192 ZNF689Q96CS4 500 aaPredicted RBP18.67■□□□□ 0.58
COL9A3-205ENST00000466192 PAWRQ96IZ0 340 aaKnown RBP18.67■□□□□ 0.58
COL9A3-205ENST00000466192 CLSTN3Q9BQT9 956 aa18.67■□□□□ 0.58
COL9A3-205ENST00000466192 MLPHQ9BV36 600 aaPredicted RBP18.67■□□□□ 0.58
COL9A3-205ENST00000466192 SLC17A7Q9P2U7 560 aa18.67■□□□□ 0.58
COL9A3-205ENST00000466192 ARHGAP42A6NI28 874 aa18.66■□□□□ 0.58
COL9A3-205ENST00000466192 TRIM49D1C9J1S8 452 aa18.66■□□□□ 0.58
COL9A3-205ENST00000466192 MAFKO60675 156 aa18.66■□□□□ 0.58
COL9A3-205ENST00000466192 SUN1O94901 812 aa18.66■□□□□ 0.58
COL9A3-205ENST00000466192 HMBSP08397 361 aa18.66■□□□□ 0.58
COL9A3-205ENST00000466192 CSH1P0DML2 217 aa18.66■□□□□ 0.58
COL9A3-205ENST00000466192 CSH2P0DML3 217 aa18.66■□□□□ 0.58
COL9A3-205ENST00000466192 PYGBP11216 843 aa18.66■□□□□ 0.58
COL9A3-205ENST00000466192 TTC31Q49AM3 519 aaPredicted RBP18.66■□□□□ 0.58
COL9A3-205ENST00000466192 SPOUT1Q5T280 376 aaKnown RBP18.66■□□□□ 0.58
COL9A3-205ENST00000466192 AFMIDQ63HM1 303 aa18.66■□□□□ 0.58
COL9A3-205ENST00000466192 STEAP4Q687X5 459 aa18.66■□□□□ 0.58
COL9A3-205ENST00000466192 ITPRIPL1Q6GPH6 555 aa18.66■□□□□ 0.58
COL9A3-205ENST00000466192 KIAA1841Q6NSI8 718 aa18.66■□□□□ 0.58
COL9A3-205ENST00000466192 UNC5BQ8IZJ1 945 aa18.66■□□□□ 0.58
COL9A3-205ENST00000466192 OR52K1Q8NGK4 314 aa18.66■□□□□ 0.58
COL9A3-205ENST00000466192 USP33Q8TEY7 942 aa18.66■□□□□ 0.58
COL9A3-205ENST00000466192 ZNF419Q96HQ0 510 aaPredicted RBP18.66■□□□□ 0.58
COL9A3-205ENST00000466192 TTLL2Q9BWV7 592 aa18.66■□□□□ 0.58
COL9A3-205ENST00000466192 SLCO1B3Q9NPD5 702 aa18.66■□□□□ 0.58
COL9A3-205ENST00000466192 SYBUQ9NX95 663 aa18.66■□□□□ 0.58
COL9A3-205ENST00000466192 PTPRSQ13332 1948 aa18.66■□□□□ 0.58
COL9A3-205ENST00000466192 SLC12A8A0AV02 714 aa18.66■□□□□ 0.58
COL9A3-205ENST00000466192 WDR91A4D1P6 747 aa18.66■□□□□ 0.58
COL9A3-205ENST00000466192 LPXNO60711 386 aa18.66■□□□□ 0.58
COL9A3-205ENST00000466192 IGLV3-27P01718 113 aa18.66■□□□□ 0.58
COL9A3-205ENST00000466192 LRRC8CQ8TDW0 803 aa18.66■□□□□ 0.58
COL9A3-205ENST00000466192 RC3H2Q9HBD1 1191 aaKnown RBP18.66■□□□□ 0.58
COL9A3-205ENST00000466192 PRDM5Q9NQX1 630 aaPredicted RBP18.66■□□□□ 0.58
COL9A3-205ENST00000466192 MOCS1Q9NZB8 636 aa18.66■□□□□ 0.58
COL9A3-205ENST00000466192 KIAA1671Q9BY89 1806 aa18.65■□□□□ 0.58
COL9A3-205ENST00000466192 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.65■□□□□ 0.58
COL9A3-205ENST00000466192 ABHD14A-ACY1A0A1B0GW23 586 aa18.65■□□□□ 0.58
COL9A3-205ENST00000466192 FAM159BA6NKW6 160 aa18.65■□□□□ 0.58
COL9A3-205ENST00000466192 WASH4PA8MWX3 477 aa18.65■□□□□ 0.58
COL9A3-205ENST00000466192 TM9SF1O15321 606 aa18.65■□□□□ 0.58
COL9A3-205ENST00000466192 TLR5O60602 858 aa18.65■□□□□ 0.58
COL9A3-205ENST00000466192 KRT37O76014 449 aa18.65■□□□□ 0.58
COL9A3-205ENST00000466192 SEC24AO95486 1093 aa18.65■□□□□ 0.58
COL9A3-205ENST00000466192 SNRPAP09012 282 aaKnown RBP18.65■□□□□ 0.58
COL9A3-205ENST00000466192 CCNB1P14635 433 aa18.65■□□□□ 0.58
COL9A3-205ENST00000466192 GJA8P48165 433 aa18.65■□□□□ 0.58
COL9A3-205ENST00000466192 GTF2A1P52655 376 aaPredicted RBP18.65■□□□□ 0.58
COL9A3-205ENST00000466192 SH2D5Q6ZV89 423 aa18.65■□□□□ 0.58
COL9A3-205ENST00000466192 ATP6V0D2Q8N8Y2 350 aa18.65■□□□□ 0.58
COL9A3-205ENST00000466192 PPM1EQ8WY54 764 aa18.65■□□□□ 0.58
COL9A3-205ENST00000466192 OXNAD1Q96HP4 312 aaPredicted RBP18.65■□□□□ 0.58
COL9A3-205ENST00000466192 BTN2A3PQ96KV6 586 aa18.65■□□□□ 0.58
COL9A3-205ENST00000466192 UBE2OQ9C0C9 1292 aaKnown RBP18.65■□□□□ 0.58
COL9A3-205ENST00000466192 NOL6Q9H6R4 1146 aaKnown RBP18.65■□□□□ 0.58
COL9A3-205ENST00000466192 GGT7Q9UJ14 662 aa18.65■□□□□ 0.58
COL9A3-205ENST00000466192 ZNF180Q9UJW8 692 aa18.65■□□□□ 0.58
COL9A3-205ENST00000466192 SOD2P04179 222 aa18.65■□□□□ 0.58
COL9A3-205ENST00000466192 CSF2RAP15509 400 aa18.65■□□□□ 0.58
COL9A3-205ENST00000466192 BMPR2Q13873 1038 aa18.65■□□□□ 0.58
COL9A3-205ENST00000466192 OTOP3Q7RTS5 596 aa18.65■□□□□ 0.58
COL9A3-205ENST00000466192 TRPM8Q7Z2W7 1104 aa18.65■□□□□ 0.58
COL9A3-205ENST00000466192 KDM4CQ9H3R0 1056 aa18.65■□□□□ 0.58
COL9A3-205ENST00000466192 ABCF3Q9NUQ8 709 aa18.65■□□□□ 0.58
COL9A3-205ENST00000466192 PHTF1Q9UMS5 762 aa18.65■□□□□ 0.58
COL9A3-205ENST00000466192 CAPN7Q9Y6W3 813 aa18.65■□□□□ 0.58
COL9A3-205ENST00000466192 ANAPC1Q9H1A4 1944 aa18.64■□□□□ 0.58
COL9A3-205ENST00000466192 TRIM43BA6NCK2 446 aa18.64■□□□□ 0.57
COL9A3-205ENST00000466192 ERI2A8K979 691 aaKnown RBP18.64■□□□□ 0.57
COL9A3-205ENST00000466192 CNTN5O94779 1100 aa18.64■□□□□ 0.57
COL9A3-205ENST00000466192 ALDH1A2O94788 518 aa18.64■□□□□ 0.57
COL9A3-205ENST00000466192 TUFMP49411 452 aaKnown RBP18.64■□□□□ 0.57
COL9A3-205ENST00000466192 PAPOLAP51003 745 aaKnown RBP18.64■□□□□ 0.57
COL9A3-205ENST00000466192 ALFQ53S48 1182 aa18.64■□□□□ 0.57
COL9A3-205ENST00000466192 LGSNQ5TDP6 509 aa18.64■□□□□ 0.57
COL9A3-205ENST00000466192 RAP1GAP2Q684P5 730 aa18.64■□□□□ 0.57
COL9A3-205ENST00000466192 RGS9BPQ6ZS82 235 aa18.64■□□□□ 0.57
COL9A3-205ENST00000466192 TFAP2DQ7Z6R9 452 aa18.64■□□□□ 0.57
COL9A3-205ENST00000466192 PACS2Q86VP3 889 aa18.64■□□□□ 0.57
COL9A3-205ENST00000466192 SLC39A11Q8N1S5 342 aa18.64■□□□□ 0.57
COL9A3-205ENST00000466192 TRIM43Q96BQ3 446 aaPredicted RBP18.64■□□□□ 0.57
COL9A3-205ENST00000466192 APOPT1Q96IL0 206 aa18.64■□□□□ 0.57
COL9A3-205ENST00000466192 IL12RB2Q99665 862 aa18.64■□□□□ 0.57
COL9A3-205ENST00000466192 ZYG11BQ9C0D3 744 aa18.64■□□□□ 0.57
COL9A3-205ENST00000466192 C11orf49Q9H6J7 331 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms