RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 URI1O94763 535 aaPredicted RBP5.71□□□□□ -1.5
VPS41-211ENST00000466017 RTN3O95197 1032 aaPredicted RBP5.71□□□□□ -1.5
VPS41-211ENST00000466017 ZBED1O96006 694 aa5.71□□□□□ -1.5
VPS41-211ENST00000466017 F9P00740 461 aa5.71□□□□□ -1.5
VPS41-211ENST00000466017 ATP1A1P05023 1023 aaKnown RBP5.71□□□□□ -1.5
VPS41-211ENST00000466017 URODP06132 367 aa5.71□□□□□ -1.5
VPS41-211ENST00000466017 KRT7P08729 469 aa5.71□□□□□ -1.5
VPS41-211ENST00000466017 ZDHHC11BP0C7U3 371 aa5.71□□□□□ -1.5
VPS41-211ENST00000466017 IMPDH2P12268 514 aa5.71□□□□□ -1.5
VPS41-211ENST00000466017 CD247P20963 164 aa5.71□□□□□ -1.5
VPS41-211ENST00000466017 GPD1P21695 349 aa5.71□□□□□ -1.5
VPS41-211ENST00000466017 ADORA2BP29275 332 aa5.71□□□□□ -1.5
VPS41-211ENST00000466017 CTNNA1P35221 906 aaKnown RBP5.71□□□□□ -1.5
VPS41-211ENST00000466017 MATKP42679 507 aa5.71□□□□□ -1.5
VPS41-211ENST00000466017 PAFAH1B1P43034 410 aa5.71□□□□□ -1.5
VPS41-211ENST00000466017 PPP3CCP48454 512 aa5.71□□□□□ -1.5
VPS41-211ENST00000466017 ZNF135P52742 658 aaPredicted RBP5.71□□□□□ -1.5
VPS41-211ENST00000466017 AIF1P55008 147 aa5.71□□□□□ -1.5
VPS41-211ENST00000466017 RWDD2BP57060 319 aa5.71□□□□□ -1.5
VPS41-211ENST00000466017 MAP3K7CLP57077 242 aa5.71□□□□□ -1.5
VPS41-211ENST00000466017 ERVK-21P61565 698 aa5.71□□□□□ -1.5
VPS41-211ENST00000466017 RPL7AP62424 266 aaKnown RBP5.71□□□□□ -1.5
VPS41-211ENST00000466017 YWHAZP63104 245 aaKnown RBP5.71□□□□□ -1.5
VPS41-211ENST00000466017 CKAP4Q07065 602 aaKnown RBP5.71□□□□□ -1.5
VPS41-211ENST00000466017 MESDQ14696 234 aa5.71□□□□□ -1.5
VPS41-211ENST00000466017 PSMD5Q16401 504 aa5.71□□□□□ -1.5
VPS41-211ENST00000466017 PPP2R5EQ16537 467 aa5.71□□□□□ -1.5
VPS41-211ENST00000466017 SLC25A52Q3SY17 297 aa5.71□□□□□ -1.5
VPS41-211ENST00000466017 ANKRD39Q53RE8 183 aa5.71□□□□□ -1.5
VPS41-211ENST00000466017 BOLA3Q53S33 107 aa5.71□□□□□ -1.5
VPS41-211ENST00000466017 SPOUT1Q5T280 376 aaKnown RBP5.71□□□□□ -1.5
VPS41-211ENST00000466017 FAM102AQ5T9C2 384 aaPredicted RBP5.71□□□□□ -1.5
VPS41-211ENST00000466017 SNX30Q5VWJ9 437 aa5.71□□□□□ -1.5
VPS41-211ENST00000466017 KIAA1841Q6NSI8 718 aa5.71□□□□□ -1.5
VPS41-211ENST00000466017 CC2D1AQ6P1N0 951 aaPredicted RBP5.71□□□□□ -1.5
VPS41-211ENST00000466017 LILRA6Q6PI73 481 aa5.71□□□□□ -1.5
VPS41-211ENST00000466017 RSPO2Q6UXX9 243 aaPredicted RBP5.71□□□□□ -1.5
VPS41-211ENST00000466017 FAM183BPQ6ZVS7 135 aa5.71□□□□□ -1.5
VPS41-211ENST00000466017 BHLHA9Q7RTU4 235 aa5.71□□□□□ -1.5
VPS41-211ENST00000466017 MON1AQ86VX9 555 aa5.71□□□□□ -1.5
VPS41-211ENST00000466017 CEP57Q86XR8 500 aa5.71□□□□□ -1.5
VPS41-211ENST00000466017 CILP2Q8IUL8 1156 aa5.71□□□□□ -1.5
VPS41-211ENST00000466017 RHOT1Q8IXI2 618 aa5.71□□□□□ -1.5
VPS41-211ENST00000466017 RCOR2Q8IZ40 523 aa5.71□□□□□ -1.5
VPS41-211ENST00000466017 ARHGAP18Q8N392 663 aa5.71□□□□□ -1.5
VPS41-211ENST00000466017 UBL4BQ8N7F7 174 aa5.71□□□□□ -1.5
VPS41-211ENST00000466017 ZNF513Q8N8E2 541 aaPredicted RBP5.71□□□□□ -1.5
VPS41-211ENST00000466017 JOSD2Q8TAC2 188 aa5.71□□□□□ -1.5
VPS41-211ENST00000466017 FAM71BQ8TC56 605 aa5.71□□□□□ -1.5
VPS41-211ENST00000466017 SPPL3Q8TCT6 385 aa5.71□□□□□ -1.5
VPS41-211ENST00000466017 MICAL1Q8TDZ2 1067 aa5.71□□□□□ -1.5
VPS41-211ENST00000466017 TEKT4Q8WW24 435 aa5.71□□□□□ -1.5
VPS41-211ENST00000466017 MAIP1Q8WWC4 291 aa5.71□□□□□ -1.5
VPS41-211ENST00000466017 RXFP2Q8WXD0 754 aa5.71□□□□□ -1.5
VPS41-211ENST00000466017 OSBPL9Q96SU4 736 aa5.71□□□□□ -1.5
VPS41-211ENST00000466017 KCNK16Q96T55 309 aa5.71□□□□□ -1.5
VPS41-211ENST00000466017 TBCBQ99426 244 aa5.71□□□□□ -1.5
VPS41-211ENST00000466017 NPY6RQ99463 290 aa5.71□□□□□ -1.5
VPS41-211ENST00000466017 TTLL2Q9BWV7 592 aa5.71□□□□□ -1.5
VPS41-211ENST00000466017 SLC12A9Q9BXP2 914 aa5.71□□□□□ -1.5
VPS41-211ENST00000466017 LMAN2LQ9H0V9 348 aa5.71□□□□□ -1.5
VPS41-211ENST00000466017 SYNCQ9H7C4 482 aa5.71□□□□□ -1.5
VPS41-211ENST00000466017 POPDC2Q9HBU9 364 aa5.71□□□□□ -1.5
VPS41-211ENST00000466017 ST7Q9NRC1 585 aa5.71□□□□□ -1.5
VPS41-211ENST00000466017 MRPL17Q9NRX2 175 aaKnown RBP5.71□□□□□ -1.5
VPS41-211ENST00000466017 DDX56Q9NY93 547 aaKnown RBP5.71□□□□□ -1.5
VPS41-211ENST00000466017 ZMYND8Q9ULU4 1186 aaPredicted RBP5.71□□□□□ -1.5
VPS41-211ENST00000466017 SCML2Q9UQR0 700 aa5.71□□□□□ -1.5
VPS41-211ENST00000466017 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.71□□□□□ -1.5
VPS41-211ENST00000466017 ASB3Q9Y575 518 aa5.71□□□□□ -1.5
VPS41-211ENST00000466017 PTPRDP23468 1912 aa5.71□□□□□ -1.5
VPS41-211ENST00000466017 PTPRSQ13332 1948 aa5.71□□□□□ -1.5
VPS41-211ENST00000466017 COL4A4P53420 1690 aaPredicted RBP5.7□□□□□ -1.5
VPS41-211ENST00000466017 TSC2P49815 1807 aa5.7□□□□□ -1.5
VPS41-211ENST00000466017 WDR27A2RRH5 827 aa5.7□□□□□ -1.5
VPS41-211ENST00000466017 LINC01553A4QN01 128 aa5.7□□□□□ -1.5
VPS41-211ENST00000466017 CCDC85CA6NKD9 419 aa5.7□□□□□ -1.5
VPS41-211ENST00000466017 F8VP50 259 aa5.7□□□□□ -1.5
VPS41-211ENST00000466017 DAB1O75553 588 aa5.7□□□□□ -1.5
VPS41-211ENST00000466017 ZNF205O95201 554 aa5.7□□□□□ -1.5
VPS41-211ENST00000466017 ZRANB2O95218 330 aaKnown RBP eCLIP5.7□□□□□ -1.5
VPS41-211ENST00000466017 VNN2O95498 520 aa5.7□□□□□ -1.5
VPS41-211ENST00000466017 FYNP06241 537 aa5.7□□□□□ -1.5
VPS41-211ENST00000466017 POU2F2P09086 479 aa5.7□□□□□ -1.5
VPS41-211ENST00000466017 CSH1P0DML2 217 aa5.7□□□□□ -1.5
VPS41-211ENST00000466017 CSH2P0DML3 217 aa5.7□□□□□ -1.5
VPS41-211ENST00000466017 TCF3P15923 654 aa5.7□□□□□ -1.5
VPS41-211ENST00000466017 PDGFRAP16234 1089 aa5.7□□□□□ -1.5
VPS41-211ENST00000466017 SYN1P17600 705 aa5.7□□□□□ -1.5
VPS41-211ENST00000466017 PFKLP17858 780 aa5.7□□□□□ -1.5
VPS41-211ENST00000466017 IBSPP21815 317 aaPredicted RBP5.7□□□□□ -1.5
VPS41-211ENST00000466017 CYP2F1P24903 491 aa5.7□□□□□ -1.5
VPS41-211ENST00000466017 PSMA2P25787 234 aa5.7□□□□□ -1.5
VPS41-211ENST00000466017 OR1D2P34982 312 aa5.7□□□□□ -1.5
VPS41-211ENST00000466017 PTPN7P35236 360 aa5.7□□□□□ -1.5
VPS41-211ENST00000466017 GTF2F1P35269 517 aaKnown RBP eCLIP5.7□□□□□ -1.5
VPS41-211ENST00000466017 ETFBP38117 255 aa5.7□□□□□ -1.5
VPS41-211ENST00000466017 CETN2P41208 172 aa5.7□□□□□ -1.5
VPS41-211ENST00000466017 MAGEA10P43363 369 aaPredicted RBP5.7□□□□□ -1.5
VPS41-211ENST00000466017 RGS7P49802 495 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms