RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 C1QBPQ07021 282 aaKnown RBP15.45■□□□□ 0.06
HDAC6-214ENST00000465269 KMT5BQ4FZB7 885 aa15.45■□□□□ 0.06
HDAC6-214ENST00000465269 BSPRYQ5W0U4 402 aa15.45■□□□□ 0.06
HDAC6-214ENST00000465269 PM20D1Q6GTS8 502 aa15.45■□□□□ 0.06
HDAC6-214ENST00000465269 GCNT7Q6ZNI0 430 aa15.45■□□□□ 0.06
HDAC6-214ENST00000465269 ZNF548Q8NEK5 533 aaPredicted RBP15.45■□□□□ 0.06
HDAC6-214ENST00000465269 FAM131CQ96AQ9 280 aa15.45■□□□□ 0.06
HDAC6-214ENST00000465269 SEMA3CQ99985 751 aa15.45■□□□□ 0.06
HDAC6-214ENST00000465269 NUCKS1Q9H1E3 243 aaKnown RBP15.45■□□□□ 0.06
HDAC6-214ENST00000465269 SLC25A18Q9H1K4 315 aa15.45■□□□□ 0.06
HDAC6-214ENST00000465269 SLC39A2Q9NP94 309 aa15.45■□□□□ 0.06
HDAC6-214ENST00000465269 KLF15Q9UIH9 416 aa15.45■□□□□ 0.06
HDAC6-214ENST00000465269 SRPK3Q9UPE1 567 aa15.45■□□□□ 0.06
HDAC6-214ENST00000465269 CACNA1DQ01668 2161 aa15.45■□□□□ 0.06
HDAC6-214ENST00000465269 CSMD1Q96PZ7 3565 aa15.44■□□□□ 0.06
HDAC6-214ENST00000465269 CCDC187A0A096LP49 1063 aa15.44■□□□□ 0.06
HDAC6-214ENST00000465269 PIK3R2O00459 728 aa15.44■□□□□ 0.06
HDAC6-214ENST00000465269 ACSL4O60488 711 aa15.44■□□□□ 0.06
HDAC6-214ENST00000465269 AP3M2P53677 418 aa15.44■□□□□ 0.06
HDAC6-214ENST00000465269 ADIGQ0VDE8 80 aa15.44■□□□□ 0.06
HDAC6-214ENST00000465269 CDH18Q13634 790 aa15.44■□□□□ 0.06
HDAC6-214ENST00000465269 ELAVL3Q14576 367 aaKnown RBP15.44■□□□□ 0.06
HDAC6-214ENST00000465269 MPP7Q5T2T1 576 aa15.44■□□□□ 0.06
HDAC6-214ENST00000465269 C14orf80Q86SX3 495 aa15.44■□□□□ 0.06
HDAC6-214ENST00000465269 HJURPQ8NCD3 748 aaPredicted RBP15.44■□□□□ 0.06
HDAC6-214ENST00000465269 FUCA2Q9BTY2 467 aa15.44■□□□□ 0.06
HDAC6-214ENST00000465269 EPB41L5Q9HCM4 733 aa15.44■□□□□ 0.06
HDAC6-214ENST00000465269 TFIP11Q9UBB9 837 aaKnown RBP15.44■□□□□ 0.06
HDAC6-214ENST00000465269 RNF103O00237 685 aa15.43■□□□□ 0.06
HDAC6-214ENST00000465269 CD2BP2O95400 341 aaKnown RBP15.43■□□□□ 0.06
HDAC6-214ENST00000465269 LATS1O95835 1130 aa15.43■□□□□ 0.06
HDAC6-214ENST00000465269 RPN1P04843 607 aaKnown RBP15.43■□□□□ 0.06
HDAC6-214ENST00000465269 SRPRAP08240 638 aaKnown RBP15.43■□□□□ 0.06
HDAC6-214ENST00000465269 SERINC3Q13530 473 aa15.43■□□□□ 0.06
HDAC6-214ENST00000465269 TPRG1LQ5T0D9 272 aa15.43■□□□□ 0.06
HDAC6-214ENST00000465269 RNF219Q5W0B1 726 aaPredicted RBP15.43■□□□□ 0.06
HDAC6-214ENST00000465269 XKR5Q6UX68 686 aa15.43■□□□□ 0.06
HDAC6-214ENST00000465269 BRAPQ7Z569 592 aa15.43■□□□□ 0.06
HDAC6-214ENST00000465269 PTAR1Q7Z6K3 402 aaPredicted RBP15.43■□□□□ 0.06
HDAC6-214ENST00000465269 C12orf56Q8IXR9 622 aa15.43■□□□□ 0.06
HDAC6-214ENST00000465269 KDM1BQ8NB78 822 aa15.43■□□□□ 0.06
HDAC6-214ENST00000465269 SLC4A11Q8NBS3 891 aa15.43■□□□□ 0.06
HDAC6-214ENST00000465269 TAS1R2Q8TE23 839 aa15.43■□□□□ 0.06
HDAC6-214ENST00000465269 FRS2Q8WU20 508 aa15.43■□□□□ 0.06
HDAC6-214ENST00000465269 TAF4BQ92750 862 aa15.43■□□□□ 0.06
HDAC6-214ENST00000465269 TMX3Q96JJ7 454 aa15.43■□□□□ 0.06
HDAC6-214ENST00000465269 PPP1R13BQ96KQ4 1090 aa15.43■□□□□ 0.06
HDAC6-214ENST00000465269 FOXP3Q9BZS1 431 aa15.43■□□□□ 0.06
HDAC6-214ENST00000465269 BLZF1Q9H2G9 400 aa15.43■□□□□ 0.06
HDAC6-214ENST00000465269 MMRN2Q9H8L6 949 aa15.43■□□□□ 0.06
HDAC6-214ENST00000465269 OLA1Q9NTK5 396 aaKnown RBP15.43■□□□□ 0.06
HDAC6-214ENST00000465269 XPO7Q9UIA9 1087 aaKnown RBP15.43■□□□□ 0.06
HDAC6-214ENST00000465269 TPX2Q9ULW0 747 aaKnown RBP15.43■□□□□ 0.06
HDAC6-214ENST00000465269 RP1L1Q8IWN7 2480 aaPredicted RBP15.43■□□□□ 0.06
HDAC6-214ENST00000465269 PLD2O14939 933 aa15.42■□□□□ 0.06
HDAC6-214ENST00000465269 BNIP3LO60238 219 aa15.42■□□□□ 0.06
HDAC6-214ENST00000465269 IGLV3-27P01718 113 aa15.42■□□□□ 0.06
HDAC6-214ENST00000465269 TRIM21P19474 475 aaKnown RBP15.42■□□□□ 0.06
HDAC6-214ENST00000465269 UGT1A5P35504 534 aa15.42■□□□□ 0.06
HDAC6-214ENST00000465269 SLC11A2P49281 568 aa15.42■□□□□ 0.06
HDAC6-214ENST00000465269 FZD2Q14332 565 aa15.42■□□□□ 0.06
HDAC6-214ENST00000465269 RABEP1Q15276 862 aa15.42■□□□□ 0.06
HDAC6-214ENST00000465269 GOLGA7BQ2TAP0 167 aa15.42■□□□□ 0.06
HDAC6-214ENST00000465269 ZNF284Q2VY69 593 aa15.42■□□□□ 0.06
HDAC6-214ENST00000465269 DCAF6Q58WW2 860 aa15.42■□□□□ 0.06
HDAC6-214ENST00000465269 SEL1L3Q68CR1 1132 aa15.42■□□□□ 0.06
HDAC6-214ENST00000465269 ZCCHC8Q6NZY4 707 aaKnown RBP15.42■□□□□ 0.06
HDAC6-214ENST00000465269 Q6ZSR6 202 aa15.42■□□□□ 0.06
HDAC6-214ENST00000465269 CIR1Q86X95 450 aaPredicted RBP15.42■□□□□ 0.06
HDAC6-214ENST00000465269 ZFAND4Q86XD8 727 aa15.42■□□□□ 0.06
HDAC6-214ENST00000465269 FBXO39Q8N4B4 442 aa15.42■□□□□ 0.06
HDAC6-214ENST00000465269 ZNF564Q8TBZ8 553 aaPredicted RBP15.42■□□□□ 0.06
HDAC6-214ENST00000465269 NIF3L1Q9GZT8 377 aa15.42■□□□□ 0.06
HDAC6-214ENST00000465269 KDM4CQ9H3R0 1056 aa15.42■□□□□ 0.06
HDAC6-214ENST00000465269 CYP3A43Q9HB55 503 aa15.42■□□□□ 0.06
HDAC6-214ENST00000465269 USP29Q9HBJ7 922 aa15.42■□□□□ 0.06
HDAC6-214ENST00000465269 KBTBD4Q9NVX7 518 aa15.42■□□□□ 0.06
HDAC6-214ENST00000465269 GEMIN8Q9NWZ8 242 aaKnown RBP15.42■□□□□ 0.06
HDAC6-214ENST00000465269 PLAAQ9Y263 795 aa15.42■□□□□ 0.06
HDAC6-214ENST00000465269 POLQO75417 2590 aa15.42■□□□□ 0.06
HDAC6-214ENST00000465269 C2CD3Q4AC94 2353 aa15.42■□□□□ 0.06
HDAC6-214ENST00000465269 ITPR3Q14573 2671 aa15.41■□□□□ 0.06
HDAC6-214ENST00000465269 EME2A4GXA9 379 aaPredicted RBP15.41■□□□□ 0.06
HDAC6-214ENST00000465269 VPS37CA5D8V6 355 aaPredicted RBP15.41■□□□□ 0.06
HDAC6-214ENST00000465269 POM121BA6NF01 834 aa15.41■□□□□ 0.06
HDAC6-214ENST00000465269 NEMP2A6NFY4 417 aa15.41■□□□□ 0.06
HDAC6-214ENST00000465269 LUC7L3O95232 432 aaKnown RBP15.41■□□□□ 0.06
HDAC6-214ENST00000465269 MOCS2O96007 188 aaPredicted RBP15.41■□□□□ 0.06
HDAC6-214ENST00000465269 TRIM49P0CI25 452 aa15.41■□□□□ 0.06
HDAC6-214ENST00000465269 TRIM49CP0CI26 452 aa15.41■□□□□ 0.06
HDAC6-214ENST00000465269 NUDT1P36639 197 aa15.41■□□□□ 0.06
HDAC6-214ENST00000465269 AFMP43652 599 aa15.41■□□□□ 0.06
HDAC6-214ENST00000465269 GCLMP48507 274 aa15.41■□□□□ 0.06
HDAC6-214ENST00000465269 RAD23BP54727 409 aa15.41■□□□□ 0.06
HDAC6-214ENST00000465269 E2F4Q16254 413 aa15.41■□□□□ 0.06
HDAC6-214ENST00000465269 KNOP1Q1ED39 458 aaKnown RBP15.41■□□□□ 0.06
HDAC6-214ENST00000465269 PIP5KL1Q5T9C9 394 aa15.41■□□□□ 0.06
HDAC6-214ENST00000465269 SLC35F3Q8IY50 421 aa15.41■□□□□ 0.06
HDAC6-214ENST00000465269 FAM26EQ8N5C1 309 aa15.41■□□□□ 0.06
HDAC6-214ENST00000465269 UBA3Q8TBC4 463 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms