RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 ZRSR2Q15696 482 aaKnown RBP6.51□□□□□ -1.37
PTCD3-205ENST00000464541 ALG10Q5BKT4 473 aa6.51□□□□□ -1.37
PTCD3-205ENST00000464541 ALG10BQ5I7T1 473 aa6.51□□□□□ -1.37
PTCD3-205ENST00000464541 MANEAQ5SRI9 462 aa6.51□□□□□ -1.37
PTCD3-205ENST00000464541 C6orf10Q5SRN2 563 aa6.51□□□□□ -1.37
PTCD3-205ENST00000464541 TTLL5Q6EMB2 1281 aa6.51□□□□□ -1.37
PTCD3-205ENST00000464541 AADACL2Q6P093 401 aa6.51□□□□□ -1.37
PTCD3-205ENST00000464541 MTFR2Q6P444 385 aa6.51□□□□□ -1.37
PTCD3-205ENST00000464541 SYNE3Q6ZMZ3 975 aa6.51□□□□□ -1.37
PTCD3-205ENST00000464541 KDELC2Q7Z4H8 507 aa6.51□□□□□ -1.37
PTCD3-205ENST00000464541 HERC6Q8IVU3 1022 aa6.51□□□□□ -1.37
PTCD3-205ENST00000464541 NRACQ8N912 160 aa6.51□□□□□ -1.37
PTCD3-205ENST00000464541 USP38Q8NB14 1042 aa6.51□□□□□ -1.37
PTCD3-205ENST00000464541 IP6K1Q92551 441 aa6.51□□□□□ -1.37
PTCD3-205ENST00000464541 KCNJ9Q92806 393 aa6.51□□□□□ -1.37
PTCD3-205ENST00000464541 MSI2Q96DH6 328 aaKnown RBP6.51□□□□□ -1.37
PTCD3-205ENST00000464541 VCPIP1Q96JH7 1222 aa6.51□□□□□ -1.37
PTCD3-205ENST00000464541 FRG2BQ96QU4 278 aa6.51□□□□□ -1.37
PTCD3-205ENST00000464541 CLPBQ9H078 707 aa6.51□□□□□ -1.37
PTCD3-205ENST00000464541 NOD2Q9HC29 1040 aa6.51□□□□□ -1.37
PTCD3-205ENST00000464541 TMEM248Q9NWD8 314 aa6.51□□□□□ -1.37
PTCD3-205ENST00000464541 KLQ9UEF7 1012 aa6.51□□□□□ -1.37
PTCD3-205ENST00000464541 PCDHGB3Q9Y5G1 929 aa6.51□□□□□ -1.37
PTCD3-205ENST00000464541 B9A039 149 aa6.5□□□□□ -1.37
PTCD3-205ENST00000464541 ATG13O75143 517 aa6.5□□□□□ -1.37
PTCD3-205ENST00000464541 CYP4B1P13584 511 aa6.5□□□□□ -1.37
PTCD3-205ENST00000464541 LMO1P25800 156 aa6.5□□□□□ -1.37
PTCD3-205ENST00000464541 PMPCAQ10713 525 aa6.5□□□□□ -1.37
PTCD3-205ENST00000464541 TAF5Q15542 800 aa6.5□□□□□ -1.37
PTCD3-205ENST00000464541 RUNDC3AQ59EK9 446 aa6.5□□□□□ -1.37
PTCD3-205ENST00000464541 ARL13AQ5H913 290 aaPredicted RBP6.5□□□□□ -1.37
PTCD3-205ENST00000464541 ZNF484Q5JVG2 852 aa6.5□□□□□ -1.37
PTCD3-205ENST00000464541 TRAPPC11Q7Z392 1133 aa6.5□□□□□ -1.37
PTCD3-205ENST00000464541 C2CD5Q86YS7 1000 aa6.5□□□□□ -1.37
PTCD3-205ENST00000464541 SMC5Q8IY18 1101 aa6.5□□□□□ -1.37
PTCD3-205ENST00000464541 FAM185AQ8N0U4 392 aa6.5□□□□□ -1.37
PTCD3-205ENST00000464541 SCLT1Q96NL6 688 aa6.5□□□□□ -1.37
PTCD3-205ENST00000464541 PPP1R10Q96QC0 940 aaKnown RBP6.5□□□□□ -1.37
PTCD3-205ENST00000464541 KRTAP17-1Q9BYP8 105 aa6.5□□□□□ -1.37
PTCD3-205ENST00000464541 FOXP1Q9H334 677 aaPredicted RBP6.5□□□□□ -1.37
PTCD3-205ENST00000464541 Q9N2J8 555 aa6.5□□□□□ -1.37
PTCD3-205ENST00000464541 FZD3Q9NPG1 666 aa6.5□□□□□ -1.37
PTCD3-205ENST00000464541 ITM2CQ9NQX7 267 aa6.5□□□□□ -1.37
PTCD3-205ENST00000464541 THAP1Q9NVV9 213 aa6.5□□□□□ -1.37
PTCD3-205ENST00000464541 FBXO4Q9UKT5 387 aa6.5□□□□□ -1.37
PTCD3-205ENST00000464541 GPR52Q9Y2T5 361 aa6.5□□□□□ -1.37
PTCD3-205ENST00000464541 IGLV5-39A0A0G2JS06 123 aa6.49□□□□□ -1.37
PTCD3-205ENST00000464541 GAGE12JA6NER3 117 aa6.49□□□□□ -1.37
PTCD3-205ENST00000464541 ZC3H11AO75152 810 aaKnown RBP eCLIP6.49□□□□□ -1.37
PTCD3-205ENST00000464541 BMP15O95972 392 aa6.49□□□□□ -1.37
PTCD3-205ENST00000464541 CSF1P09603 554 aa6.49□□□□□ -1.37
PTCD3-205ENST00000464541 TYK2P29597 1187 aa6.49□□□□□ -1.37
PTCD3-205ENST00000464541 ZBTB16Q05516 673 aa6.49□□□□□ -1.37
PTCD3-205ENST00000464541 ANKRD1Q15327 319 aa6.49□□□□□ -1.37
PTCD3-205ENST00000464541 C5orf22Q49AR2 442 aa6.49□□□□□ -1.37
PTCD3-205ENST00000464541 LRRC24Q50LG9 513 aa6.49□□□□□ -1.37
PTCD3-205ENST00000464541 FAM171A1Q5VUB5 890 aa6.49□□□□□ -1.37
PTCD3-205ENST00000464541 DENND1BQ6P3S1 775 aa6.49□□□□□ -1.37
PTCD3-205ENST00000464541 PIM3Q86V86 326 aa6.49□□□□□ -1.37
PTCD3-205ENST00000464541 EME1Q96AY2 570 aa6.49□□□□□ -1.37
PTCD3-205ENST00000464541 PYM1Q9BRP8 204 aaKnown RBP6.49□□□□□ -1.37
PTCD3-205ENST00000464541 CADM1Q9BY67 442 aaKnown RBP6.49□□□□□ -1.37
PTCD3-205ENST00000464541 ACTR5Q9H9F9 607 aaPredicted RBP6.49□□□□□ -1.37
PTCD3-205ENST00000464541 RRP7AQ9Y3A4 280 aaKnown RBP6.49□□□□□ -1.37
PTCD3-205ENST00000464541 SYN3O14994 580 aa6.48□□□□□ -1.37
PTCD3-205ENST00000464541 EPN2O95208 641 aa6.48□□□□□ -1.37
PTCD3-205ENST00000464541 CNPP09543 421 aaKnown RBP6.48□□□□□ -1.37
PTCD3-205ENST00000464541 SLC16A2P36021 539 aa6.48□□□□□ -1.37
PTCD3-205ENST00000464541 CYP2J2P51589 502 aa6.48□□□□□ -1.37
PTCD3-205ENST00000464541 MVDP53602 400 aa6.48□□□□□ -1.37
PTCD3-205ENST00000464541 GOLGA8FQ08AF8 430 aa6.48□□□□□ -1.37
PTCD3-205ENST00000464541 CBWD5Q5RIA9 395 aa6.48□□□□□ -1.37
PTCD3-205ENST00000464541 AAGABQ6PD74 315 aa6.48□□□□□ -1.37
PTCD3-205ENST00000464541 BRSK2Q8IWQ3 736 aa6.48□□□□□ -1.37
PTCD3-205ENST00000464541 SUGP1Q8IWZ8 645 aaKnown RBP6.48□□□□□ -1.37
PTCD3-205ENST00000464541 VPS52Q8N1B4 723 aa6.48□□□□□ -1.37
PTCD3-205ENST00000464541 ANKRD44Q8N8A2 993 aa6.48□□□□□ -1.37
PTCD3-205ENST00000464541 ZNF548Q8NEK5 533 aaPredicted RBP6.48□□□□□ -1.37
PTCD3-205ENST00000464541 CEP70Q8NHQ1 597 aa6.48□□□□□ -1.37
PTCD3-205ENST00000464541 GCC1Q96CN9 775 aa6.48□□□□□ -1.37
PTCD3-205ENST00000464541 ZSCAN31Q96LW9 406 aaPredicted RBP6.48□□□□□ -1.37
PTCD3-205ENST00000464541 NLRP4Q96MN2 994 aa6.48□□□□□ -1.37
PTCD3-205ENST00000464541 HERC2P3Q9BVR0 1158 aa6.48□□□□□ -1.37
PTCD3-205ENST00000464541 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.48□□□□□ -1.37
PTCD3-205ENST00000464541 FRMD8Q9BZ67 464 aaPredicted RBP6.48□□□□□ -1.37
PTCD3-205ENST00000464541 AAMDCQ9H7C9 122 aa6.48□□□□□ -1.37
PTCD3-205ENST00000464541 DGKBQ9Y6T7 804 aa6.48□□□□□ -1.37
PTCD3-205ENST00000464541 MDM4O15151 490 aa6.47□□□□□ -1.37
PTCD3-205ENST00000464541 IFNA2P01563 188 aa6.47□□□□□ -1.37
PTCD3-205ENST00000464541 KLKB1P03952 638 aa6.47□□□□□ -1.37
PTCD3-205ENST00000464541 ARSAP15289 507 aa6.47□□□□□ -1.37
PTCD3-205ENST00000464541 AVPR2P30518 371 aa6.47□□□□□ -1.37
PTCD3-205ENST00000464541 ASPHD1Q5U4P2 390 aa6.47□□□□□ -1.37
PTCD3-205ENST00000464541 B4GALNT4Q76KP1 1039 aa6.47□□□□□ -1.37
PTCD3-205ENST00000464541 SLC25A41Q8N5S1 370 aa6.47□□□□□ -1.37
PTCD3-205ENST00000464541 C2CD4CQ8TF44 421 aa6.47□□□□□ -1.37
PTCD3-205ENST00000464541 HDAC7Q8WUI4 952 aa6.47□□□□□ -1.37
PTCD3-205ENST00000464541 NCSTNQ92542 709 aa6.47□□□□□ -1.37
PTCD3-205ENST00000464541 RILPL2Q969X0 211 aa6.47□□□□□ -1.37
PTCD3-205ENST00000464541 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms