RNA–Protein interactions for RNA: ENST00000464451.5

SEC61A1-203, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 1,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-203ENST00000464451 ATP6V1G2O95670 118 aa12.4□□□□□ -0.42
SEC61A1-203ENST00000464451 IL1BP01584 269 aa12.4□□□□□ -0.42
SEC61A1-203ENST00000464451 CNPP09543 421 aaKnown RBP12.4□□□□□ -0.42
SEC61A1-203ENST00000464451 SERPINB9P50453 376 aa12.4□□□□□ -0.42
SEC61A1-203ENST00000464451 AP1B1Q10567 949 aa12.4□□□□□ -0.42
SEC61A1-203ENST00000464451 NME3Q13232 169 aa12.4□□□□□ -0.42
SEC61A1-203ENST00000464451 PAFAH1B3Q15102 231 aaKnown RBP12.4□□□□□ -0.42
SEC61A1-203ENST00000464451 SYPL2Q5VXT5 272 aa12.4□□□□□ -0.42
SEC61A1-203ENST00000464451 RFX8Q6ZV50 586 aa12.4□□□□□ -0.42
SEC61A1-203ENST00000464451 PDZD4Q76G19 769 aaPredicted RBP12.4□□□□□ -0.42
SEC61A1-203ENST00000464451 CCNJLQ8IV13 435 aa12.4□□□□□ -0.42
SEC61A1-203ENST00000464451 NTAN1Q96AB6 310 aa12.4□□□□□ -0.42
SEC61A1-203ENST00000464451 STAMBPL1Q96FJ0 436 aa12.4□□□□□ -0.42
SEC61A1-203ENST00000464451 P2RY11Q96G91 374 aa12.4□□□□□ -0.42
SEC61A1-203ENST00000464451 SYT15Q9BQS2 421 aa12.4□□□□□ -0.42
SEC61A1-203ENST00000464451 TTPALQ9BTX7 342 aa12.4□□□□□ -0.42
SEC61A1-203ENST00000464451 TSSK1BQ9BXA7 367 aa12.4□□□□□ -0.42
SEC61A1-203ENST00000464451 TRIM55Q9BYV6 548 aa12.4□□□□□ -0.42
SEC61A1-203ENST00000464451 C12orf65Q9H3J6 166 aaKnown RBP12.4□□□□□ -0.42
SEC61A1-203ENST00000464451 NPHS2Q9NP85 383 aa12.4□□□□□ -0.42
SEC61A1-203ENST00000464451 CNGB3Q9NQW8 809 aa12.4□□□□□ -0.42
SEC61A1-203ENST00000464451 SMYD2Q9NRG4 433 aa12.4□□□□□ -0.42
SEC61A1-203ENST00000464451 MKS1Q9NXB0 559 aa12.4□□□□□ -0.42
SEC61A1-203ENST00000464451 MOCS1Q9NZB8 636 aa12.4□□□□□ -0.42
SEC61A1-203ENST00000464451 PRUNE2Q8WUY3 3088 aa12.4□□□□□ -0.42
SEC61A1-203ENST00000464451 SYNJ2BP-COX16A0A087WUM0 186 aa12.4□□□□□ -0.42
SEC61A1-203ENST00000464451 SDR42E2A6NKP2 422 aa12.4□□□□□ -0.42
SEC61A1-203ENST00000464451 RNF103O00237 685 aa12.4□□□□□ -0.42
SEC61A1-203ENST00000464451 EEF2KO00418 725 aaKnown RBP12.4□□□□□ -0.42
SEC61A1-203ENST00000464451 KLF11O14901 512 aa12.4□□□□□ -0.42
SEC61A1-203ENST00000464451 CREB3O43889 395 aa12.4□□□□□ -0.42
SEC61A1-203ENST00000464451 TGDSO95455 350 aa12.4□□□□□ -0.42
SEC61A1-203ENST00000464451 SPATA31D3P0C874 917 aa12.4□□□□□ -0.42
SEC61A1-203ENST00000464451 NEFHP12036 1026 aa12.4□□□□□ -0.42
SEC61A1-203ENST00000464451 FGFR3P22607 806 aa12.4□□□□□ -0.42
SEC61A1-203ENST00000464451 CNTFP26441 200 aa12.4□□□□□ -0.42
SEC61A1-203ENST00000464451 SLC8A1P32418 973 aa12.4□□□□□ -0.42
SEC61A1-203ENST00000464451 CCNFP41002 786 aa12.4□□□□□ -0.42
SEC61A1-203ENST00000464451 GRIA1P42261 906 aa12.4□□□□□ -0.42
SEC61A1-203ENST00000464451 SERPINB4P48594 390 aa12.4□□□□□ -0.42
SEC61A1-203ENST00000464451 PITX1P78337 314 aaPredicted RBP12.4□□□□□ -0.42
SEC61A1-203ENST00000464451 DSG1Q02413 1049 aa12.4□□□□□ -0.42
SEC61A1-203ENST00000464451 DPYSQ14117 519 aa12.4□□□□□ -0.42
SEC61A1-203ENST00000464451 STEAP4Q687X5 459 aa12.4□□□□□ -0.42
SEC61A1-203ENST00000464451 LRRC8BQ6P9F7 803 aa12.4□□□□□ -0.42
SEC61A1-203ENST00000464451 SPATA31D4Q6ZUB0 917 aa12.4□□□□□ -0.42
SEC61A1-203ENST00000464451 NLRP9Q7RTR0 991 aa12.4□□□□□ -0.42
SEC61A1-203ENST00000464451 MPP5Q8N3R9 675 aa12.4□□□□□ -0.42
SEC61A1-203ENST00000464451 PTPRN2Q92932 1015 aa12.4□□□□□ -0.42
SEC61A1-203ENST00000464451 TTC17Q96AE7 1141 aa12.4□□□□□ -0.42
SEC61A1-203ENST00000464451 KLHL5Q96PQ7 755 aa12.4□□□□□ -0.42
SEC61A1-203ENST00000464451 NOD2Q9HC29 1040 aa12.4□□□□□ -0.42
SEC61A1-203ENST00000464451 PIGVQ9NUD9 493 aa12.4□□□□□ -0.42
SEC61A1-203ENST00000464451 CLDND1Q9NY35 253 aa12.4□□□□□ -0.42
SEC61A1-203ENST00000464451 COX16Q9P0S2 106 aa12.4□□□□□ -0.42
SEC61A1-203ENST00000464451 PLLPQ9Y342 182 aa12.4□□□□□ -0.42
SEC61A1-203ENST00000464451 RAD54BQ9Y620 910 aa12.4□□□□□ -0.42
SEC61A1-203ENST00000464451 MYO7AQ13402 2215 aa12.4□□□□□ -0.43
SEC61A1-203ENST00000464451 TEX28O15482 410 aa12.39□□□□□ -0.43
SEC61A1-203ENST00000464451 ADAM12O43184 909 aa12.39□□□□□ -0.43
SEC61A1-203ENST00000464451 LILRB3O75022 631 aa12.39□□□□□ -0.43
SEC61A1-203ENST00000464451 CLASP2O75122 1294 aaKnown RBP12.39□□□□□ -0.43
SEC61A1-203ENST00000464451 RFPL1O75677 317 aa12.39□□□□□ -0.43
SEC61A1-203ENST00000464451 AP1G2O75843 785 aa12.39□□□□□ -0.43
SEC61A1-203ENST00000464451 ALDH1A2O94788 518 aa12.39□□□□□ -0.43
SEC61A1-203ENST00000464451 CSH1P0DML2 217 aa12.39□□□□□ -0.43
SEC61A1-203ENST00000464451 CSH2P0DML3 217 aa12.39□□□□□ -0.43
SEC61A1-203ENST00000464451 ADRA1BP35368 520 aa12.39□□□□□ -0.43
SEC61A1-203ENST00000464451 RASSF2P50749 326 aa12.39□□□□□ -0.43
SEC61A1-203ENST00000464451 ARPP19P56211 112 aa12.39□□□□□ -0.43
SEC61A1-203ENST00000464451 DAOAP59103 153 aa12.39□□□□□ -0.43
SEC61A1-203ENST00000464451 SCAPQ12770 1279 aa12.39□□□□□ -0.43
SEC61A1-203ENST00000464451 ELAVL2Q12926 359 aaKnown RBP12.39□□□□□ -0.43
SEC61A1-203ENST00000464451 PARP6Q2NL67 630 aa12.39□□□□□ -0.43
SEC61A1-203ENST00000464451 RAB41Q5JT25 222 aa12.39□□□□□ -0.43
SEC61A1-203ENST00000464451 VARS2Q5ST30 1063 aaKnown RBP12.39□□□□□ -0.43
SEC61A1-203ENST00000464451 PDE12Q6L8Q7 609 aaKnown RBP12.39□□□□□ -0.43
SEC61A1-203ENST00000464451 TRMT10BQ6PF06 316 aaKnown RBP12.39□□□□□ -0.43
SEC61A1-203ENST00000464451 RSPO2Q6UXX9 243 aaPredicted RBP12.39□□□□□ -0.43
SEC61A1-203ENST00000464451 HFE2Q6ZVN8 426 aa12.39□□□□□ -0.43
SEC61A1-203ENST00000464451 FAM35AQ86V20 835 aa12.39□□□□□ -0.43
SEC61A1-203ENST00000464451 TRIM42Q8IWZ5 723 aa12.39□□□□□ -0.43
SEC61A1-203ENST00000464451 KIF2BQ8N4N8 673 aa12.39□□□□□ -0.43
SEC61A1-203ENST00000464451 CCNYQ8ND76 341 aa12.39□□□□□ -0.43
SEC61A1-203ENST00000464451 VN1R2Q8NFZ6 395 aa12.39□□□□□ -0.43
SEC61A1-203ENST00000464451 SLC7A14Q8TBB6 771 aa12.39□□□□□ -0.43
SEC61A1-203ENST00000464451 DEPDC1BQ8WUY9 529 aa12.39□□□□□ -0.43
SEC61A1-203ENST00000464451 PCED1BQ96HM7 432 aa12.39□□□□□ -0.43
SEC61A1-203ENST00000464451 SUSD3Q96L08 255 aa12.39□□□□□ -0.43
SEC61A1-203ENST00000464451 RAB3IPQ96QF0 476 aaPredicted RBP12.39□□□□□ -0.43
SEC61A1-203ENST00000464451 NAT9Q9BTE0 207 aa12.39□□□□□ -0.43
SEC61A1-203ENST00000464451 ULBP1Q9BZM6 244 aa12.39□□□□□ -0.43
SEC61A1-203ENST00000464451 CD248Q9HCU0 757 aa12.39□□□□□ -0.43
SEC61A1-203ENST00000464451 RRN3Q9NYV6 651 aa12.39□□□□□ -0.43
SEC61A1-203ENST00000464451 CDH9Q9ULB4 789 aa12.39□□□□□ -0.43
SEC61A1-203ENST00000464451 MYBPHLA2RUH7 354 aa12.38□□□□□ -0.43
SEC61A1-203ENST00000464451 YJEFN3A6XGL0 299 aa12.38□□□□□ -0.43
SEC61A1-203ENST00000464451 E7ENQ6 273 aa12.38□□□□□ -0.43
SEC61A1-203ENST00000464451 DCLK1O15075 740 aa12.38□□□□□ -0.43
SEC61A1-203ENST00000464451 NCAM2O15394 837 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms