RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 CPLX3Q8WVH0 158 aa13.32□□□□□ -0.28
XRN1-203ENST00000463916 NUP58Q9BVL2 599 aa13.32□□□□□ -0.28
XRN1-203ENST00000463916 MUC3BQ9H195 1237 aa13.32□□□□□ -0.28
XRN1-203ENST00000463916 TMEM51Q9NW97 253 aa13.32□□□□□ -0.28
XRN1-203ENST00000463916 SERGEFQ9UGK8 458 aa13.32□□□□□ -0.28
XRN1-203ENST00000463916 NEU3Q9UQ49 428 aa13.32□□□□□ -0.28
XRN1-203ENST00000463916 PI4KAP42356 2102 aa13.32□□□□□ -0.28
XRN1-203ENST00000463916 SPTBN2O15020 2390 aa13.32□□□□□ -0.28
XRN1-203ENST00000463916 SPEGQ15772 3267 aa13.32□□□□□ -0.28
XRN1-203ENST00000463916 SLC30A4O14863 429 aa13.32□□□□□ -0.28
XRN1-203ENST00000463916 FTLP02792 175 aaPredicted RBP13.32□□□□□ -0.28
XRN1-203ENST00000463916 GLDCP23378 1020 aa13.32□□□□□ -0.28
XRN1-203ENST00000463916 OR1E1P30953 314 aa13.32□□□□□ -0.28
XRN1-203ENST00000463916 OXCT1P55809 520 aa13.32□□□□□ -0.28
XRN1-203ENST00000463916 SULT2A1Q06520 285 aa13.32□□□□□ -0.28
XRN1-203ENST00000463916 STPG1Q5TH74 334 aa13.32□□□□□ -0.28
XRN1-203ENST00000463916 MANEALQ5VSG8 457 aa13.32□□□□□ -0.28
XRN1-203ENST00000463916 MMAAQ8IVH4 418 aaKnown RBP13.32□□□□□ -0.28
XRN1-203ENST00000463916 STK40Q8N2I9 435 aa13.32□□□□□ -0.28
XRN1-203ENST00000463916 NDFIP2Q9NV92 336 aa13.32□□□□□ -0.28
XRN1-203ENST00000463916 EDDM13A0A1B0GTR0 161 aa13.31□□□□□ -0.28
XRN1-203ENST00000463916 A0A1W2PQJ5 194 aa13.31□□□□□ -0.28
XRN1-203ENST00000463916 TARSL2A2RTX5 802 aaKnown RBP13.31□□□□□ -0.28
XRN1-203ENST00000463916 K7ERQ8 282 aa13.31□□□□□ -0.28
XRN1-203ENST00000463916 CDX4O14627 284 aaPredicted RBP13.31□□□□□ -0.28
XRN1-203ENST00000463916 TM4SF5O14894 197 aa13.31□□□□□ -0.28
XRN1-203ENST00000463916 RHOCP08134 193 aa13.31□□□□□ -0.28
XRN1-203ENST00000463916 PLEKP08567 350 aaPredicted RBP13.31□□□□□ -0.28
XRN1-203ENST00000463916 OXTRP30559 389 aa13.31□□□□□ -0.28
XRN1-203ENST00000463916 ACBD5Q5T8D3 534 aaPredicted RBP13.31□□□□□ -0.28
XRN1-203ENST00000463916 ZNF776Q68DI1 518 aaPredicted RBP13.31□□□□□ -0.28
XRN1-203ENST00000463916 DGLUCYQ7Z3D6 616 aa13.31□□□□□ -0.28
XRN1-203ENST00000463916 SETD3Q86TU7 594 aaPredicted RBP13.31□□□□□ -0.28
XRN1-203ENST00000463916 PYROXD2Q8N2H3 581 aa13.31□□□□□ -0.28
XRN1-203ENST00000463916 OR7D4Q8NG98 312 aa13.31□□□□□ -0.28
XRN1-203ENST00000463916 VCPIP1Q96JH7 1222 aa13.31□□□□□ -0.28
XRN1-203ENST00000463916 EDEM2Q9BV94 578 aa13.31□□□□□ -0.28
XRN1-203ENST00000463916 TRIM7Q9C029 511 aa13.31□□□□□ -0.28
XRN1-203ENST00000463916 ZYG11BQ9C0D3 744 aa13.31□□□□□ -0.28
XRN1-203ENST00000463916 XPO4Q9C0E2 1151 aaKnown RBP13.31□□□□□ -0.28
XRN1-203ENST00000463916 OSBPL2Q9H1P3 480 aa13.31□□□□□ -0.28
XRN1-203ENST00000463916 C6orf106Q9H6K1 298 aaPredicted RBP13.31□□□□□ -0.28
XRN1-203ENST00000463916 FBRSQ9HAH7 460 aa13.31□□□□□ -0.28
XRN1-203ENST00000463916 VPS51Q9UID3 782 aa13.31□□□□□ -0.28
XRN1-203ENST00000463916 SLCO1B1Q9Y6L6 691 aa13.31□□□□□ -0.28
XRN1-203ENST00000463916 MID1O15344 667 aa13.3□□□□□ -0.28
XRN1-203ENST00000463916 ATP9BO43861 1147 aa13.3□□□□□ -0.28
XRN1-203ENST00000463916 LRIG2O94898 1065 aa13.3□□□□□ -0.28
XRN1-203ENST00000463916 DNTTP04053 509 aa13.3□□□□□ -0.28
XRN1-203ENST00000463916 GYPCP04921 128 aa13.3□□□□□ -0.28
XRN1-203ENST00000463916 GZMAP12544 262 aa13.3□□□□□ -0.28
XRN1-203ENST00000463916 SDHBP21912 280 aa13.3□□□□□ -0.28
XRN1-203ENST00000463916 METAP1P53582 386 aa13.3□□□□□ -0.28
XRN1-203ENST00000463916 LIMK1P53667 647 aa13.3□□□□□ -0.28
XRN1-203ENST00000463916 NRG1Q02297 640 aaPredicted RBP13.3□□□□□ -0.28
XRN1-203ENST00000463916 ZBTB16Q05516 673 aa13.3□□□□□ -0.28
XRN1-203ENST00000463916 DLG2Q15700 870 aa13.3□□□□□ -0.28
XRN1-203ENST00000463916 CST6Q15828 149 aa13.3□□□□□ -0.28
XRN1-203ENST00000463916 ARL13BQ3SXY8 428 aa13.3□□□□□ -0.28
XRN1-203ENST00000463916 ACCSLQ4AC99 568 aa13.3□□□□□ -0.28
XRN1-203ENST00000463916 PLEKHA7Q6IQ23 1121 aa13.3□□□□□ -0.28
XRN1-203ENST00000463916 DCUN1D2Q6PH85 259 aa13.3□□□□□ -0.28
XRN1-203ENST00000463916 SLC23A3Q6PIS1 610 aa13.3□□□□□ -0.28
XRN1-203ENST00000463916 LINGO4Q6UY18 593 aa13.3□□□□□ -0.28
XRN1-203ENST00000463916 DRC7Q8IY82 874 aa13.3□□□□□ -0.28
XRN1-203ENST00000463916 RGL4Q8IZJ4 473 aa13.3□□□□□ -0.28
XRN1-203ENST00000463916 CADM4Q8NFZ8 388 aa13.3□□□□□ -0.28
XRN1-203ENST00000463916 RTKNQ9BST9 563 aa13.3□□□□□ -0.28
XRN1-203ENST00000463916 PPARGC1AQ9UBK2 798 aaKnown RBP13.3□□□□□ -0.28
XRN1-203ENST00000463916 EVLQ9UI08 416 aaPredicted RBP13.3□□□□□ -0.28
XRN1-203ENST00000463916 CAPN11Q9UMQ6 739 aa13.3□□□□□ -0.28
XRN1-203ENST00000463916 C4orf47A7E2U8 309 aa13.3□□□□□ -0.28
XRN1-203ENST00000463916 METTL12A8MUP2 240 aa13.3□□□□□ -0.28
XRN1-203ENST00000463916 SMAD6O43541 496 aaKnown RBP13.3□□□□□ -0.28
XRN1-203ENST00000463916 SRCP12931 536 aa13.3□□□□□ -0.28
XRN1-203ENST00000463916 SLC8A1P32418 973 aa13.3□□□□□ -0.28
XRN1-203ENST00000463916 NNMTP40261 264 aa13.3□□□□□ -0.28
XRN1-203ENST00000463916 VASPP50552 380 aaPredicted RBP13.3□□□□□ -0.28
XRN1-203ENST00000463916 ZNF252P-AS1Q0IIN9 211 aa13.3□□□□□ -0.28
XRN1-203ENST00000463916 NFKBIBQ15653 356 aa13.3□□□□□ -0.28
XRN1-203ENST00000463916 C6orf118Q5T5N4 469 aa13.3□□□□□ -0.28
XRN1-203ENST00000463916 RWDD4Q6NW29 188 aaKnown RBP13.3□□□□□ -0.28
XRN1-203ENST00000463916 SCYL2Q6P3W7 929 aa13.3□□□□□ -0.28
XRN1-203ENST00000463916 NLRP14Q86W24 1093 aa13.3□□□□□ -0.28
XRN1-203ENST00000463916 SH2D3CQ8N5H7 860 aa13.3□□□□□ -0.28
XRN1-203ENST00000463916 AADATQ8N5Z0 425 aa13.3□□□□□ -0.28
XRN1-203ENST00000463916 ARFGAP1Q8N6T3 406 aa13.3□□□□□ -0.28
XRN1-203ENST00000463916 DNASE2BQ8WZ79 361 aa13.3□□□□□ -0.28
XRN1-203ENST00000463916 FOXJ1Q92949 421 aa13.3□□□□□ -0.28
XRN1-203ENST00000463916 NTAN1Q96AB6 310 aa13.3□□□□□ -0.28
XRN1-203ENST00000463916 PPP1R9BQ96SB3 815 aa13.3□□□□□ -0.28
XRN1-203ENST00000463916 CNPY3Q9BT09 278 aa13.3□□□□□ -0.28
XRN1-203ENST00000463916 PABPC3Q9H361 631 aaKnown RBP13.3□□□□□ -0.28
XRN1-203ENST00000463916 CAPN10Q9HC96 672 aa13.3□□□□□ -0.28
XRN1-203ENST00000463916 PARVAQ9NVD7 372 aa13.3□□□□□ -0.28
XRN1-203ENST00000463916 FBXL12Q9NXK8 326 aa13.3□□□□□ -0.28
XRN1-203ENST00000463916 ADAMTS1Q9UHI8 967 aa13.3□□□□□ -0.28
XRN1-203ENST00000463916 SARDHQ9UL12 918 aa13.3□□□□□ -0.28
XRN1-203ENST00000463916 HS3ST2Q9Y278 367 aa13.3□□□□□ -0.28
XRN1-203ENST00000463916 ADAMTS9Q9P2N4 1935 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms