RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-204	ENST00000462815	SART1	O43290	800 aa	Known RBP	11.5	□□□□□ -0.57
PTPN7-204	ENST00000462815	IL1B	P01584	269 aa		11.5	□□□□□ -0.57
PTPN7-204	ENST00000462815	PDGFRA	P16234	1089 aa		11.5	□□□□□ -0.57
PTPN7-204	ENST00000462815	ABCB4	P21439	1286 aa		11.5	□□□□□ -0.57
PTPN7-204	ENST00000462815	ACP1	P24666	158 aa		11.5	□□□□□ -0.57
PTPN7-204	ENST00000462815	ACADSB	P45954	432 aa		11.5	□□□□□ -0.57
PTPN7-204	ENST00000462815	ARRB1	P49407	418 aa	Predicted RBP	11.5	□□□□□ -0.57
PTPN7-204	ENST00000462815	INSM1	Q01101	510 aa	Predicted RBP	11.5	□□□□□ -0.57
PTPN7-204	ENST00000462815	CENPC	Q03188	943 aa		11.5	□□□□□ -0.57
PTPN7-204	ENST00000462815	ILK	Q13418	452 aa		11.5	□□□□□ -0.57
PTPN7-204	ENST00000462815	C5orf22	Q49AR2	442 aa		11.5	□□□□□ -0.57
PTPN7-204	ENST00000462815	FBXL22	Q6P050	247 aa		11.5	□□□□□ -0.57
PTPN7-204	ENST00000462815	IQCH	Q86VS3	1027 aa		11.5	□□□□□ -0.57
PTPN7-204	ENST00000462815	SLC25A45	Q8N413	288 aa		11.5	□□□□□ -0.57
PTPN7-204	ENST00000462815	WDTC1	Q8N5D0	677 aa		11.5	□□□□□ -0.57
PTPN7-204	ENST00000462815	DCBLD1	Q8N8Z6	715 aa		11.5	□□□□□ -0.57
PTPN7-204	ENST00000462815	TMEM145	Q8NBT3	493 aa		11.5	□□□□□ -0.57
PTPN7-204	ENST00000462815	SKA1	Q96BD8	255 aa		11.5	□□□□□ -0.57
PTPN7-204	ENST00000462815	FAM149B1	Q96BN6	582 aa		11.5	□□□□□ -0.57
PTPN7-204	ENST00000462815	DHTKD1	Q96HY7	919 aa	Predicted RBP	11.5	□□□□□ -0.57
PTPN7-204	ENST00000462815	DCBLD2	Q96PD2	775 aa		11.5	□□□□□ -0.57
PTPN7-204	ENST00000462815	UBL7	Q96S82	380 aa	Predicted RBP	11.5	□□□□□ -0.57
PTPN7-204	ENST00000462815	MAN1B1	Q9UKM7	699 aa		11.5	□□□□□ -0.57
PTPN7-204	ENST00000462815	PPM1H	Q9ULR3	514 aa		11.5	□□□□□ -0.57
PTPN7-204	ENST00000462815	FLNB	O75369	2602 aa	Known RBP	11.49	□□□□□ -0.57
PTPN7-204	ENST00000462815	DOCK9	Q9BZ29	2069 aa		11.49	□□□□□ -0.57
PTPN7-204	ENST00000462815		A0A1B0GVM2	712 aa		11.49	□□□□□ -0.57
PTPN7-204	ENST00000462815	TCAF2	A6NFQ2	919 aa		11.49	□□□□□ -0.57
PTPN7-204	ENST00000462815	BECN2	A8MW95	431 aa		11.49	□□□□□ -0.57
PTPN7-204	ENST00000462815		I6L893	689 aa	Predicted RBP	11.49	□□□□□ -0.57
PTPN7-204	ENST00000462815	TRIM38	O00635	465 aa		11.49	□□□□□ -0.57
PTPN7-204	ENST00000462815	ATXN7	O15265	892 aa	Predicted RBP	11.49	□□□□□ -0.57
PTPN7-204	ENST00000462815	MOCS3	O95396	460 aa		11.49	□□□□□ -0.57
PTPN7-204	ENST00000462815	APOE	P02649	317 aa		11.49	□□□□□ -0.57
PTPN7-204	ENST00000462815	CTSL	P07711	333 aa		11.49	□□□□□ -0.57
PTPN7-204	ENST00000462815	JUP	P14923	745 aa		11.49	□□□□□ -0.57
PTPN7-204	ENST00000462815	CKMT2	P17540	419 aa		11.49	□□□□□ -0.57
PTPN7-204	ENST00000462815	HNF1B	P35680	557 aa		11.49	□□□□□ -0.57
PTPN7-204	ENST00000462815	YWHAZ	P63104	245 aa	Known RBP	11.49	□□□□□ -0.57
PTPN7-204	ENST00000462815	CNTN1	Q12860	1018 aa		11.49	□□□□□ -0.57
PTPN7-204	ENST00000462815	PDCL	Q13371	301 aa		11.49	□□□□□ -0.57
PTPN7-204	ENST00000462815	C6orf118	Q5T5N4	469 aa		11.49	□□□□□ -0.57
PTPN7-204	ENST00000462815	PIP5KL1	Q5T9C9	394 aa		11.49	□□□□□ -0.57
PTPN7-204	ENST00000462815	TTC39B	Q5VTQ0	682 aa	Predicted RBP	11.49	□□□□□ -0.57
PTPN7-204	ENST00000462815	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	11.49	□□□□□ -0.57
PTPN7-204	ENST00000462815	ERICH1	Q86X53	443 aa		11.49	□□□□□ -0.57
PTPN7-204	ENST00000462815	ELOA2	Q8IYF1	753 aa	Predicted RBP	11.49	□□□□□ -0.57
PTPN7-204	ENST00000462815	ZNF683	Q8IZ20	524 aa		11.49	□□□□□ -0.57
PTPN7-204	ENST00000462815	OXR1	Q8N573	874 aa		11.49	□□□□□ -0.57
PTPN7-204	ENST00000462815	ZNF606	Q8WXB4	792 aa		11.49	□□□□□ -0.57
PTPN7-204	ENST00000462815	SMARCE1	Q969G3	411 aa		11.49	□□□□□ -0.57
PTPN7-204	ENST00000462815	TIGD1	Q96MW7	591 aa		11.49	□□□□□ -0.57
PTPN7-204	ENST00000462815	INTS2	Q9H0H0	1204 aa	Known RBP	11.49	□□□□□ -0.57
PTPN7-204	ENST00000462815	THAP9	Q9H5L6	903 aa		11.49	□□□□□ -0.57
PTPN7-204	ENST00000462815	ANLN	Q9NQW6	1124 aa		11.49	□□□□□ -0.57
PTPN7-204	ENST00000462815	ST7	Q9NRC1	585 aa		11.49	□□□□□ -0.57
PTPN7-204	ENST00000462815	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	11.49	□□□□□ -0.57
PTPN7-204	ENST00000462815	DMTF1	Q9Y222	760 aa		11.49	□□□□□ -0.57
PTPN7-204	ENST00000462815	CA5B	Q9Y2D0	317 aa		11.49	□□□□□ -0.57
PTPN7-204	ENST00000462815	ATP6V1D	Q9Y5K8	247 aa		11.49	□□□□□ -0.57
PTPN7-204	ENST00000462815	ZNF462	Q96JM2	2506 aa		11.49	□□□□□ -0.57
PTPN7-204	ENST00000462815	TBC1D3D	A0A087WVF3	549 aa		11.48	□□□□□ -0.57
PTPN7-204	ENST00000462815	TBC1D3I	A0A087WXS9	549 aa		11.48	□□□□□ -0.57
PTPN7-204	ENST00000462815	TBC1D3E	A0A087X179	549 aa		11.48	□□□□□ -0.57
PTPN7-204	ENST00000462815	TBC1D3K	A0A087X1G2	549 aa		11.48	□□□□□ -0.57
PTPN7-204	ENST00000462815	LY6G6E	A0A0G2JKS1	128 aa		11.48	□□□□□ -0.57
PTPN7-204	ENST00000462815	TBC1D3F	A6NER0	549 aa	Predicted RBP	11.48	□□□□□ -0.57
PTPN7-204	ENST00000462815	TBC1D3L	B9A6J9	549 aa		11.48	□□□□□ -0.57
PTPN7-204	ENST00000462815		F5H5T6	163 aa		11.48	□□□□□ -0.57
PTPN7-204	ENST00000462815	TK2	O00142	265 aa		11.48	□□□□□ -0.57
PTPN7-204	ENST00000462815	PSMA7	O14818	248 aa		11.48	□□□□□ -0.57
PTPN7-204	ENST00000462815	MCF2L	O15068	1137 aa		11.48	□□□□□ -0.57
PTPN7-204	ENST00000462815	ALOX15B	O15296	676 aa		11.48	□□□□□ -0.57
PTPN7-204	ENST00000462815	BRINP1	O60477	761 aa		11.48	□□□□□ -0.57
PTPN7-204	ENST00000462815	SMC2	O95347	1197 aa		11.48	□□□□□ -0.57
PTPN7-204	ENST00000462815	TBC1D3H	P0C7X1	549 aa		11.48	□□□□□ -0.57
PTPN7-204	ENST00000462815	MAT2A	P31153	395 aa	Known RBP	11.48	□□□□□ -0.57
PTPN7-204	ENST00000462815	NUDT1	P36639	197 aa		11.48	□□□□□ -0.57
PTPN7-204	ENST00000462815	SEMG2	Q02383	582 aa		11.48	□□□□□ -0.57
PTPN7-204	ENST00000462815	SULT2A1	Q06520	285 aa		11.48	□□□□□ -0.57
PTPN7-204	ENST00000462815	KCNH2	Q12809	1159 aa		11.48	□□□□□ -0.57
PTPN7-204	ENST00000462815	OVGP1	Q12889	678 aa		11.48	□□□□□ -0.57
PTPN7-204	ENST00000462815	BECN1	Q14457	450 aa		11.48	□□□□□ -0.57
PTPN7-204	ENST00000462815	CCDC40	Q4G0X9	1142 aa		11.48	□□□□□ -0.57
PTPN7-204	ENST00000462815	CDCP2	Q5VXM1	449 aa		11.48	□□□□□ -0.57
PTPN7-204	ENST00000462815	RNF219	Q5W0B1	726 aa	Predicted RBP	11.48	□□□□□ -0.57
PTPN7-204	ENST00000462815	TBC1D3G	Q6DHY5	549 aa		11.48	□□□□□ -0.57
PTPN7-204	ENST00000462815	ISM2	Q6H9L7	571 aa		11.48	□□□□□ -0.57
PTPN7-204	ENST00000462815	TBC1D3C	Q6IPX1	549 aa		11.48	□□□□□ -0.57
PTPN7-204	ENST00000462815		Q6ZVU0	165 aa		11.48	□□□□□ -0.57
PTPN7-204	ENST00000462815	C14orf80	Q86SX3	495 aa		11.48	□□□□□ -0.57
PTPN7-204	ENST00000462815	TBC1D3	Q8IZP1	549 aa	Predicted RBP	11.48	□□□□□ -0.57
PTPN7-204	ENST00000462815	SH2D3C	Q8N5H7	860 aa		11.48	□□□□□ -0.57
PTPN7-204	ENST00000462815	CPXM1	Q96SM3	734 aa		11.48	□□□□□ -0.57
PTPN7-204	ENST00000462815	PSMB7	Q99436	277 aa		11.48	□□□□□ -0.57
PTPN7-204	ENST00000462815	FEM1A	Q9BSK4	669 aa		11.48	□□□□□ -0.57
PTPN7-204	ENST00000462815	TRIM62	Q9BVG3	475 aa		11.48	□□□□□ -0.57
PTPN7-204	ENST00000462815	GTPBP4	Q9BZE4	634 aa	Known RBP	11.48	□□□□□ -0.57
PTPN7-204	ENST00000462815	GPR27	Q9NS67	375 aa		11.48	□□□□□ -0.57
PTPN7-204	ENST00000462815	ASNSD1	Q9NWL6	643 aa		11.48	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 19 ms