RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 FAM90A12PA8MX19 464 aa3.31□□□□□ -1.88
HDAC6-212ENST00000461608 FAM90A23PA8MXZ1 464 aa3.31□□□□□ -1.88
HDAC6-212ENST00000461608 TARM1B6A8C7 271 aa3.31□□□□□ -1.88
HDAC6-212ENST00000461608 PROB1E7EW31 1015 aa3.31□□□□□ -1.88
HDAC6-212ENST00000461608 SYN3O14994 580 aa3.31□□□□□ -1.88
HDAC6-212ENST00000461608 FOXN1O15353 648 aa3.31□□□□□ -1.88
HDAC6-212ENST00000461608 ZBED4O75132 1171 aa3.31□□□□□ -1.88
HDAC6-212ENST00000461608 GCP02774 474 aa3.31□□□□□ -1.88
HDAC6-212ENST00000461608 CHRM4P08173 479 aa3.31□□□□□ -1.88
HDAC6-212ENST00000461608 HSPA1AP0DMV8 641 aaKnown RBP3.31□□□□□ -1.88
HDAC6-212ENST00000461608 HSPA1BP0DMV9 641 aaKnown RBP3.31□□□□□ -1.88
HDAC6-212ENST00000461608 ATP1A3P13637 1013 aa3.31□□□□□ -1.88
HDAC6-212ENST00000461608 ATF7P17544 494 aaPredicted RBP3.31□□□□□ -1.88
HDAC6-212ENST00000461608 HNF1BP35680 557 aa3.31□□□□□ -1.88
HDAC6-212ENST00000461608 VPS41P49754 854 aa3.31□□□□□ -1.88
HDAC6-212ENST00000461608 ARHGAP8P85298 464 aa3.31□□□□□ -1.88
HDAC6-212ENST00000461608 PRICKLE4Q2TBC4 344 aa3.31□□□□□ -1.88
HDAC6-212ENST00000461608 ZNF766Q5HY98 468 aa3.31□□□□□ -1.88
HDAC6-212ENST00000461608 AKNAD1Q5T1N1 836 aa3.31□□□□□ -1.88
HDAC6-212ENST00000461608 SLC9C2Q5TAH2 1124 aa3.31□□□□□ -1.88
HDAC6-212ENST00000461608 VWA5B1Q5TIE3 1220 aa3.31□□□□□ -1.88
HDAC6-212ENST00000461608 SPATA1Q5VX52 437 aa3.31□□□□□ -1.88
HDAC6-212ENST00000461608 LRIG3Q6UXM1 1119 aa3.31□□□□□ -1.88
HDAC6-212ENST00000461608 RANBP10Q6VN20 620 aa3.31□□□□□ -1.88
HDAC6-212ENST00000461608 TMTC3Q6ZXV5 915 aa3.31□□□□□ -1.88
HDAC6-212ENST00000461608 TBC1D1Q86TI0 1168 aaPredicted RBP3.31□□□□□ -1.88
HDAC6-212ENST00000461608 KLBQ86Z14 1044 aa3.31□□□□□ -1.88
HDAC6-212ENST00000461608 RPAP2Q8IXW5 612 aaPredicted RBP3.31□□□□□ -1.88
HDAC6-212ENST00000461608 CCDC105Q8IYK2 499 aa3.31□□□□□ -1.88
HDAC6-212ENST00000461608 ZMIZ2Q8NF64 920 aa3.31□□□□□ -1.88
HDAC6-212ENST00000461608 RAB40AQ8WXH6 277 aa3.31□□□□□ -1.88
HDAC6-212ENST00000461608 KCNJ9Q92806 393 aa3.31□□□□□ -1.88
HDAC6-212ENST00000461608 NELL1Q92832 810 aa3.31□□□□□ -1.88
HDAC6-212ENST00000461608 CELF1Q92879 486 aaKnown RBP3.31□□□□□ -1.88
HDAC6-212ENST00000461608 REPS1Q96D71 796 aa3.31□□□□□ -1.88
HDAC6-212ENST00000461608 SAAL1Q96ER3 474 aa3.31□□□□□ -1.88
HDAC6-212ENST00000461608 HERC2P3Q9BVR0 1158 aa3.31□□□□□ -1.88
HDAC6-212ENST00000461608 IFT27Q9BW83 186 aa3.31□□□□□ -1.88
HDAC6-212ENST00000461608 PHF7Q9BWX1 381 aaPredicted RBP3.31□□□□□ -1.88
HDAC6-212ENST00000461608 CADM1Q9BY67 442 aaKnown RBP3.31□□□□□ -1.88
HDAC6-212ENST00000461608 ARHGAP39Q9C0H5 1083 aa3.31□□□□□ -1.88
HDAC6-212ENST00000461608 OSBPL5Q9H0X9 879 aaPredicted RBP3.31□□□□□ -1.88
HDAC6-212ENST00000461608 EPHX3Q9H6B9 360 aa3.31□□□□□ -1.88
HDAC6-212ENST00000461608 ENTPD7Q9NQZ7 604 aa3.31□□□□□ -1.88
HDAC6-212ENST00000461608 KRT84Q9NSB2 600 aa3.31□□□□□ -1.88
HDAC6-212ENST00000461608 NSMCE4AQ9NXX6 385 aa3.31□□□□□ -1.88
HDAC6-212ENST00000461608 SH3BP4Q9P0V3 963 aa3.31□□□□□ -1.88
HDAC6-212ENST00000461608 ORC3Q9UBD5 711 aaPredicted RBP3.31□□□□□ -1.88
HDAC6-212ENST00000461608 SLC25A10Q9UBX3 287 aaPredicted RBP3.31□□□□□ -1.88
HDAC6-212ENST00000461608 AASSQ9UDR5 926 aa3.31□□□□□ -1.88
HDAC6-212ENST00000461608 ST3GAL5Q9UNP4 418 aa3.31□□□□□ -1.88
HDAC6-212ENST00000461608 SLC8A2Q9UPR5 921 aa3.31□□□□□ -1.88
HDAC6-212ENST00000461608 INSL6Q9Y581 213 aa3.31□□□□□ -1.88
HDAC6-212ENST00000461608 HEMK1Q9Y5R4 338 aaPredicted RBP3.31□□□□□ -1.88
HDAC6-212ENST00000461608 C17orf113A0A1B0GUU1 675 aa3.3□□□□□ -1.88
HDAC6-212ENST00000461608 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.3□□□□□ -1.88
HDAC6-212ENST00000461608 TCRBV5S1A1TA0A578 114 aa3.3□□□□□ -1.88
HDAC6-212ENST00000461608 PGPEP1LA6NFU8 196 aa3.3□□□□□ -1.88
HDAC6-212ENST00000461608 C16orf96A6NNT2 1141 aa3.3□□□□□ -1.88
HDAC6-212ENST00000461608 KCNJ18B7U540 433 aa3.3□□□□□ -1.88
HDAC6-212ENST00000461608 TEX22C9J3V5 150 aa3.3□□□□□ -1.88
HDAC6-212ENST00000461608 K7ENM7 598 aa3.3□□□□□ -1.88
HDAC6-212ENST00000461608 TNPO2O14787 897 aaKnown RBP3.3□□□□□ -1.88
HDAC6-212ENST00000461608 IKBKBO14920 756 aa3.3□□□□□ -1.88
HDAC6-212ENST00000461608 DSCR3O14972 297 aa3.3□□□□□ -1.88
HDAC6-212ENST00000461608 STRNO43815 780 aa3.3□□□□□ -1.88
HDAC6-212ENST00000461608 CLEC3BP05452 202 aa3.3□□□□□ -1.88
HDAC6-212ENST00000461608 LCKP06239 509 aa3.3□□□□□ -1.88
HDAC6-212ENST00000461608 RFPL3SP0C7P2 107 aa3.3□□□□□ -1.88
HDAC6-212ENST00000461608 ARSAP15289 507 aa3.3□□□□□ -1.88
HDAC6-212ENST00000461608 TFEBP19484 476 aa3.3□□□□□ -1.88
HDAC6-212ENST00000461608 PROZP22891 400 aa3.3□□□□□ -1.88
HDAC6-212ENST00000461608 BSGP35613 385 aa3.3□□□□□ -1.88
HDAC6-212ENST00000461608 MTNR1AP48039 350 aa3.3□□□□□ -1.88
HDAC6-212ENST00000461608 CCT4P50991 539 aaKnown RBP3.3□□□□□ -1.88
HDAC6-212ENST00000461608 BLKP51451 505 aa3.3□□□□□ -1.88
HDAC6-212ENST00000461608 CCR9P51686 369 aa3.3□□□□□ -1.88
HDAC6-212ENST00000461608 EIF3BP55884 814 aaKnown RBP3.3□□□□□ -1.88
HDAC6-212ENST00000461608 ARF3P61204 181 aaPredicted RBP3.3□□□□□ -1.88
HDAC6-212ENST00000461608 ARF1P84077 181 aaKnown RBP3.3□□□□□ -1.88
HDAC6-212ENST00000461608 SHC2P98077 582 aa3.3□□□□□ -1.88
HDAC6-212ENST00000461608 HSF1Q00613 529 aa3.3□□□□□ -1.88
HDAC6-212ENST00000461608 PTP4A2Q12974 167 aa3.3□□□□□ -1.88
HDAC6-212ENST00000461608 SLC14A1Q13336 389 aa3.3□□□□□ -1.88
HDAC6-212ENST00000461608 GAB1Q13480 694 aa3.3□□□□□ -1.88
HDAC6-212ENST00000461608 KPNB1Q14974 876 aaKnown RBP3.3□□□□□ -1.88
HDAC6-212ENST00000461608 TSTQ16762 297 aaKnown RBP3.3□□□□□ -1.88
HDAC6-212ENST00000461608 C10orf76Q5T2E6 689 aa3.3□□□□□ -1.88
HDAC6-212ENST00000461608 ZNF474Q6S9Z5 364 aaPredicted RBP3.3□□□□□ -1.88
HDAC6-212ENST00000461608 KIAA1324Q6UXG2 1013 aaKnown RBP3.3□□□□□ -1.88
HDAC6-212ENST00000461608 FASTKD5Q7L8L6 764 aaKnown RBP3.3□□□□□ -1.88
HDAC6-212ENST00000461608 PTF1AQ7RTS3 328 aa3.3□□□□□ -1.88
HDAC6-212ENST00000461608 TMEM200AQ86VY9 491 aa3.3□□□□□ -1.88
HDAC6-212ENST00000461608 RFX6Q8HWS3 928 aa3.3□□□□□ -1.88
HDAC6-212ENST00000461608 VRK3Q8IV63 474 aa3.3□□□□□ -1.88
HDAC6-212ENST00000461608 BRSK2Q8IWQ3 736 aa3.3□□□□□ -1.88
HDAC6-212ENST00000461608 ADSSL1Q8N142 457 aa3.3□□□□□ -1.88
HDAC6-212ENST00000461608 GPR150Q8NGU9 434 aa3.3□□□□□ -1.88
HDAC6-212ENST00000461608 ETNPPLQ8TBG4 499 aa3.3□□□□□ -1.88
HDAC6-212ENST00000461608 BCAS4Q8TDM0 211 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms