RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 MIR1-1HGQ9H1L0 117 aa15.82■□□□□ 0.12
VARS-219ENST00000461328 CAPN10Q9HC96 672 aa15.82■□□□□ 0.12
VARS-219ENST00000461328 SLC25A13Q9UJS0 675 aa15.82■□□□□ 0.12
VARS-219ENST00000461328 A0A1W2PQJ5 194 aa15.81■□□□□ 0.12
VARS-219ENST00000461328 SIGLEC16A6NMB1 481 aa15.81■□□□□ 0.12
VARS-219ENST00000461328 METTL12A8MUP2 240 aa15.81■□□□□ 0.12
VARS-219ENST00000461328 TTC34A8MYJ7 566 aa15.81■□□□□ 0.12
VARS-219ENST00000461328 I6L893 689 aaPredicted RBP15.81■□□□□ 0.12
VARS-219ENST00000461328 ATMINO43313 823 aaPredicted RBP15.81■□□□□ 0.12
VARS-219ENST00000461328 CBFA2T2O43439 604 aa15.81■□□□□ 0.12
VARS-219ENST00000461328 RNASEH1O60930 286 aaKnown RBP15.81■□□□□ 0.12
VARS-219ENST00000461328 SIN3BO75182 1162 aa15.81■□□□□ 0.12
VARS-219ENST00000461328 CNTN5O94779 1100 aa15.81■□□□□ 0.12
VARS-219ENST00000461328 SYPP08247 313 aa15.81■□□□□ 0.12
VARS-219ENST00000461328 PRKCIP41743 596 aa15.81■□□□□ 0.12
VARS-219ENST00000461328 STK19P49842 368 aaPredicted RBP15.81■□□□□ 0.12
VARS-219ENST00000461328 RAB6CQ53S08 254 aa15.81■□□□□ 0.12
VARS-219ENST00000461328 ALFQ53S48 1182 aa15.81■□□□□ 0.12
VARS-219ENST00000461328 SH3PXD2AQ5TCZ1 1133 aa15.81■□□□□ 0.12
VARS-219ENST00000461328 DCAF12L1Q5VU92 463 aa15.81■□□□□ 0.12
VARS-219ENST00000461328 PSAPL1Q6NUJ1 521 aa15.81■□□□□ 0.12
VARS-219ENST00000461328 ZNF571Q7Z3V5 609 aaPredicted RBP15.81■□□□□ 0.12
VARS-219ENST00000461328 BNIPLQ7Z465 357 aa15.81■□□□□ 0.12
VARS-219ENST00000461328 VPS36Q86VN1 386 aa15.81■□□□□ 0.12
VARS-219ENST00000461328 GANCQ8TET4 914 aa15.81■□□□□ 0.12
VARS-219ENST00000461328 IQCDQ96DY2 449 aa15.81■□□□□ 0.12
VARS-219ENST00000461328 RPL10LQ96L21 214 aaKnown RBP15.81■□□□□ 0.12
VARS-219ENST00000461328 C1orf74Q96LT6 269 aa15.81■□□□□ 0.12
VARS-219ENST00000461328 SYT11Q9BT88 431 aa15.81■□□□□ 0.12
VARS-219ENST00000461328 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.81■□□□□ 0.12
VARS-219ENST00000461328 XPO4Q9C0E2 1151 aaKnown RBP15.81■□□□□ 0.12
VARS-219ENST00000461328 RAB6CQ9H0N0 254 aa15.81■□□□□ 0.12
VARS-219ENST00000461328 RSPH9Q9H1X1 276 aaPredicted RBP15.81■□□□□ 0.12
VARS-219ENST00000461328 MPP6Q9NZW5 540 aa15.81■□□□□ 0.12
VARS-219ENST00000461328 NCOR2Q9Y618 2525 aa15.81■□□□□ 0.12
VARS-219ENST00000461328 ITIH6Q6UXX5 1313 aa15.8■□□□□ 0.12
VARS-219ENST00000461328 EDDM13A0A1B0GTR0 161 aa15.8■□□□□ 0.12
VARS-219ENST00000461328 TARSL2A2RTX5 802 aaKnown RBP15.8■□□□□ 0.12
VARS-219ENST00000461328 CCP110O43303 1012 aa15.8■□□□□ 0.12
VARS-219ENST00000461328 ENDOD1O94919 500 aa15.8■□□□□ 0.12
VARS-219ENST00000461328 KCNK5O95279 499 aa15.8■□□□□ 0.12
VARS-219ENST00000461328 C7P10643 843 aa15.8■□□□□ 0.12
VARS-219ENST00000461328 ACSL1P33121 698 aa15.8■□□□□ 0.12
VARS-219ENST00000461328 PBX1P40424 430 aa15.8■□□□□ 0.12
VARS-219ENST00000461328 NOVA1P51513 510 aaKnown RBP15.8■□□□□ 0.12
VARS-219ENST00000461328 ARID5BQ14865 1188 aa15.8■□□□□ 0.12
VARS-219ENST00000461328 C6orf118Q5T5N4 469 aa15.8■□□□□ 0.12
VARS-219ENST00000461328 RWDD4Q6NW29 188 aaKnown RBP15.8■□□□□ 0.12
VARS-219ENST00000461328 SCYL2Q6P3W7 929 aa15.8■□□□□ 0.12
VARS-219ENST00000461328 WDR59Q6PJI9 974 aa15.8■□□□□ 0.12
VARS-219ENST00000461328 HDDC3Q8N4P3 179 aa15.8■□□□□ 0.12
VARS-219ENST00000461328 ZCCHC9Q8N567 271 aaKnown RBP15.8■□□□□ 0.12
VARS-219ENST00000461328 DNASE2BQ8WZ79 361 aa15.8■□□□□ 0.12
VARS-219ENST00000461328 SNX19Q92543 992 aa15.8■□□□□ 0.12
VARS-219ENST00000461328 ZNF653Q96CK0 615 aa15.8■□□□□ 0.12
VARS-219ENST00000461328 ZYG11BQ9C0D3 744 aa15.8■□□□□ 0.12
VARS-219ENST00000461328 BTBD1Q9H0C5 482 aa15.8■□□□□ 0.12
VARS-219ENST00000461328 PCED1AQ9H1Q7 454 aa15.8■□□□□ 0.12
VARS-219ENST00000461328 SLCO3A1Q9UIG8 710 aa15.8■□□□□ 0.12
VARS-219ENST00000461328 SCML1Q9UN30 329 aa15.8■□□□□ 0.12
VARS-219ENST00000461328 NCKAP1Q9Y2A7 1128 aa15.8■□□□□ 0.12
VARS-219ENST00000461328 LUC7L2Q9Y383 392 aaKnown RBP15.8■□□□□ 0.12
VARS-219ENST00000461328 GON4LQ3T8J9 2241 aa15.79■□□□□ 0.12
VARS-219ENST00000461328 A0A1B0GTW7 788 aa15.79■□□□□ 0.12
VARS-219ENST00000461328 DDX3XO00571 662 aaKnown RBP eCLIP15.79■□□□□ 0.12
VARS-219ENST00000461328 ARHGAP33O14559 1287 aa15.79■□□□□ 0.12
VARS-219ENST00000461328 SEMA4FO95754 770 aa15.79■□□□□ 0.12
VARS-219ENST00000461328 OR1E1P30953 314 aa15.79■□□□□ 0.12
VARS-219ENST00000461328 ADRA1BP35368 520 aa15.79■□□□□ 0.12
VARS-219ENST00000461328 ZNF143P52747 638 aaPredicted RBP15.79■□□□□ 0.12
VARS-219ENST00000461328 PLK1P53350 603 aa15.79■□□□□ 0.12
VARS-219ENST00000461328 HDAC4P56524 1084 aa15.79■□□□□ 0.12
VARS-219ENST00000461328 RPL7AP62424 266 aaKnown RBP15.79■□□□□ 0.12
VARS-219ENST00000461328 KRT83P78385 493 aa15.79■□□□□ 0.12
VARS-219ENST00000461328 ZBED6P86452 979 aa15.79■□□□□ 0.12
VARS-219ENST00000461328 SFSWAPQ12872 951 aaKnown RBP15.79■□□□□ 0.12
VARS-219ENST00000461328 CST6Q15828 149 aa15.79■□□□□ 0.12
VARS-219ENST00000461328 C5orf22Q49AR2 442 aa15.79■□□□□ 0.12
VARS-219ENST00000461328 ACCSLQ4AC99 568 aa15.79■□□□□ 0.12
VARS-219ENST00000461328 C9orf64Q5T6V5 341 aa15.79■□□□□ 0.12
VARS-219ENST00000461328 N4BP2L1Q5TBK1 243 aaPredicted RBP15.79■□□□□ 0.12
VARS-219ENST00000461328 SETD3Q86TU7 594 aaPredicted RBP15.79■□□□□ 0.12
VARS-219ENST00000461328 MMAAQ8IVH4 418 aaKnown RBP15.79■□□□□ 0.12
VARS-219ENST00000461328 ZNF683Q8IZ20 524 aa15.79■□□□□ 0.12
VARS-219ENST00000461328 MINDY1Q8N5J2 469 aa15.79■□□□□ 0.12
VARS-219ENST00000461328 CCDC185Q8N715 623 aa15.79■□□□□ 0.12
VARS-219ENST00000461328 OR52K2Q8NGK3 314 aa15.79■□□□□ 0.12
VARS-219ENST00000461328 TRIM11Q96F44 468 aa15.79■□□□□ 0.12
VARS-219ENST00000461328 VCPIP1Q96JH7 1222 aa15.79■□□□□ 0.12
VARS-219ENST00000461328 FEM1AQ9BSK4 669 aa15.79■□□□□ 0.12
VARS-219ENST00000461328 CNPY3Q9BT09 278 aa15.79■□□□□ 0.12
VARS-219ENST00000461328 C2orf49Q9BVC5 232 aaPredicted RBP15.79■□□□□ 0.12
VARS-219ENST00000461328 PABPC3Q9H361 631 aaKnown RBP15.79■□□□□ 0.12
VARS-219ENST00000461328 PARVAQ9NVD7 372 aa15.79■□□□□ 0.12
VARS-219ENST00000461328 FBXL12Q9NXK8 326 aa15.79■□□□□ 0.12
VARS-219ENST00000461328 TBC1D30Q9Y2I9 924 aa15.79■□□□□ 0.12
VARS-219ENST00000461328 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.79■□□□□ 0.121e-6■□□□□ 8.1
VARS-219ENST00000461328 BZW2Q9Y6E2 419 aaKnown RBP15.79■□□□□ 0.12
VARS-219ENST00000461328 SPTBN2O15020 2390 aa15.79■□□□□ 0.12
VARS-219ENST00000461328 IGLV3-10A0A075B6K4 115 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms