RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 RPL6Q02878 288 aaKnown RBP16.07■□□□□ 0.16
SDF4-204ENST00000459994 NNTQ13423 1086 aa16.07■□□□□ 0.16
SDF4-204ENST00000459994 EIF4EBP2Q13542 120 aaPredicted RBP16.07■□□□□ 0.16
SDF4-204ENST00000459994 MESDQ14696 234 aa16.07■□□□□ 0.16
SDF4-204ENST00000459994 MPPE1Q53F39 396 aa16.07■□□□□ 0.16
SDF4-204ENST00000459994 ADGRF1Q5T601 910 aa16.07■□□□□ 0.16
SDF4-204ENST00000459994 PIK3R6Q5UE93 754 aa16.07■□□□□ 0.16
SDF4-204ENST00000459994 OTUD1Q5VV17 481 aaPredicted RBP16.07■□□□□ 0.16
SDF4-204ENST00000459994 SDE2Q6IQ49 451 aa16.07■□□□□ 0.16
SDF4-204ENST00000459994 KIAA1324Q6UXG2 1013 aaKnown RBP16.07■□□□□ 0.16
SDF4-204ENST00000459994 C11orf74Q86VG3 221 aa16.07■□□□□ 0.16
SDF4-204ENST00000459994 CACUL1Q86Y37 369 aa16.07■□□□□ 0.16
SDF4-204ENST00000459994 SYCE1Q8N0S2 351 aa16.07■□□□□ 0.16
SDF4-204ENST00000459994 SERPINB11Q96P15 392 aa16.07■□□□□ 0.16
SDF4-204ENST00000459994 TBCBQ99426 244 aa16.07■□□□□ 0.16
SDF4-204ENST00000459994 CIPCQ9C0C6 399 aa16.07■□□□□ 0.16
SDF4-204ENST00000459994 ABCB8Q9NUT2 735 aa16.07■□□□□ 0.16
SDF4-204ENST00000459994 PLXNA2O75051 1894 aa16.07■□□□□ 0.16
SDF4-204ENST00000459994 M0QYT0 321 aa16.06■□□□□ 0.16
SDF4-204ENST00000459994 GIPC1O14908 333 aa16.06■□□□□ 0.16
SDF4-204ENST00000459994 IRAK2O43187 625 aa16.06■□□□□ 0.16
SDF4-204ENST00000459994 ACSL4O60488 711 aa16.06■□□□□ 0.16
SDF4-204ENST00000459994 FOXD2O60548 495 aaPredicted RBP16.06■□□□□ 0.16
SDF4-204ENST00000459994 TBL1XO60907 577 aa16.06■□□□□ 0.16
SDF4-204ENST00000459994 ADRB1P08588 477 aa16.06■□□□□ 0.16
SDF4-204ENST00000459994 TFE3P19532 575 aaPredicted RBP16.06■□□□□ 0.16
SDF4-204ENST00000459994 RDXP35241 583 aaKnown RBP16.06■□□□□ 0.16
SDF4-204ENST00000459994 ATP11AP98196 1134 aa16.06■□□□□ 0.16
SDF4-204ENST00000459994 C15orf59Q2T9L4 293 aaPredicted RBP16.06■□□□□ 0.16
SDF4-204ENST00000459994 TRIM61Q5EBN2 209 aa16.06■□□□□ 0.16
SDF4-204ENST00000459994 LYSMD4Q5XG99 296 aa16.06■□□□□ 0.16
SDF4-204ENST00000459994 IL31Q6EBC2 164 aa16.06■□□□□ 0.16
SDF4-204ENST00000459994 CHST9Q7L1S5 443 aa16.06■□□□□ 0.16
SDF4-204ENST00000459994 KIAA0907Q7Z7F0 614 aaPredicted RBP16.06■□□□□ 0.16
SDF4-204ENST00000459994 ADIPOR2Q86V24 386 aa16.06■□□□□ 0.16
SDF4-204ENST00000459994 C17orf53Q8N3J3 647 aaPredicted RBP16.06■□□□□ 0.16
SDF4-204ENST00000459994 TRIM58Q8NG06 486 aa16.06■□□□□ 0.16
SDF4-204ENST00000459994 FAM172AQ8WUF8 416 aa16.06■□□□□ 0.16
SDF4-204ENST00000459994 TMA16Q96EY4 203 aaKnown RBP16.06■□□□□ 0.16
SDF4-204ENST00000459994 SLC39A13Q96H72 371 aa16.06■□□□□ 0.16
SDF4-204ENST00000459994 LMLNQ96KR4 655 aa16.06■□□□□ 0.16
SDF4-204ENST00000459994 ADAM33Q9BZ11 813 aa16.06■□□□□ 0.16
SDF4-204ENST00000459994 FAM204AQ9H8W3 233 aa16.06■□□□□ 0.16
SDF4-204ENST00000459994 DDIT4Q9NX09 232 aa16.06■□□□□ 0.16
SDF4-204ENST00000459994 PILRBQ9UKJ0 227 aa16.06■□□□□ 0.16
SDF4-204ENST00000459994 ALG6Q9Y672 507 aa16.06■□□□□ 0.16
SDF4-204ENST00000459994 CAPN6Q9Y6Q1 641 aa16.06■□□□□ 0.16
SDF4-204ENST00000459994 TMEM110-MUSTN1A8MSY1 372 aa16.05■□□□□ 0.16
SDF4-204ENST00000459994 KHNYNO15037 678 aaKnown RBP16.05■□□□□ 0.16
SDF4-204ENST00000459994 KIF5CO60282 957 aa16.05■□□□□ 0.16
SDF4-204ENST00000459994 LRCH4O75427 683 aa16.05■□□□□ 0.16
SDF4-204ENST00000459994 PALMO75781 387 aa16.05■□□□□ 0.16
SDF4-204ENST00000459994 LATS1O95835 1130 aa16.05■□□□□ 0.16
SDF4-204ENST00000459994 CXCR3P49682 368 aa16.05■□□□□ 0.16
SDF4-204ENST00000459994 NUMBP49757 651 aa16.05■□□□□ 0.16
SDF4-204ENST00000459994 HDAC4P56524 1084 aa16.05■□□□□ 0.16
SDF4-204ENST00000459994 RPS24P62847 133 aaKnown RBP16.05■□□□□ 0.16
SDF4-204ENST00000459994 DEUP1Q05D60 604 aa16.05■□□□□ 0.16
SDF4-204ENST00000459994 RING1Q06587 406 aa16.05■□□□□ 0.16
SDF4-204ENST00000459994 ZNF33AQ06730 810 aa16.05■□□□□ 0.16
SDF4-204ENST00000459994 PTPRNQ16849 979 aa16.05■□□□□ 0.16
SDF4-204ENST00000459994 SH3PXD2AQ5TCZ1 1133 aa16.05■□□□□ 0.16
SDF4-204ENST00000459994 PEAR1Q5VY43 1037 aaPredicted RBP16.05■□□□□ 0.16
SDF4-204ENST00000459994 SND1Q7KZF4 910 aaKnown RBP eCLIP16.05■□□□□ 0.166e-11■□□□□ 9.2
SDF4-204ENST00000459994 DAAM2Q86T65 1068 aa16.05■□□□□ 0.16
SDF4-204ENST00000459994 ARFGAP1Q8N6T3 406 aa16.05■□□□□ 0.16
SDF4-204ENST00000459994 ALS2CR12Q96Q35 445 aa16.05■□□□□ 0.16
SDF4-204ENST00000459994 SLC2A11Q9BYW1 496 aa16.05■□□□□ 0.16
SDF4-204ENST00000459994 IRX2Q9BZI1 471 aaPredicted RBP16.05■□□□□ 0.16
SDF4-204ENST00000459994 MTG2Q9H4K7 406 aa16.05■□□□□ 0.16
SDF4-204ENST00000459994 STIM2Q9P246 746 aa16.05■□□□□ 0.16
SDF4-204ENST00000459994 GGA2Q9UJY4 613 aa16.05■□□□□ 0.16
SDF4-204ENST00000459994 TLR6Q9Y2C9 796 aa16.05■□□□□ 0.16
SDF4-204ENST00000459994 DOCK9Q9BZ29 2069 aa16.04■□□□□ 0.16
SDF4-204ENST00000459994 MOCS2O96007 188 aaPredicted RBP16.04■□□□□ 0.16
SDF4-204ENST00000459994 EPHX1P07099 455 aa16.04■□□□□ 0.16
SDF4-204ENST00000459994 SLC2A3P11169 496 aa16.04■□□□□ 0.16
SDF4-204ENST00000459994 COMTP21964 271 aa16.04■□□□□ 0.16
SDF4-204ENST00000459994 MSNP26038 577 aaKnown RBP16.04■□□□□ 0.16
SDF4-204ENST00000459994 MAOBP27338 520 aa16.04■□□□□ 0.16
SDF4-204ENST00000459994 MIPP30301 263 aa16.04■□□□□ 0.16
SDF4-204ENST00000459994 NME3Q13232 169 aa16.04■□□□□ 0.16
SDF4-204ENST00000459994 CDO1Q16878 200 aa16.04■□□□□ 0.16
SDF4-204ENST00000459994 FSCBQ5H9T9 825 aa16.04■□□□□ 0.16
SDF4-204ENST00000459994 N4BP2L1Q5TBK1 243 aaPredicted RBP16.04■□□□□ 0.16
SDF4-204ENST00000459994 SYT12Q8IV01 421 aa16.04■□□□□ 0.16
SDF4-204ENST00000459994 CFAP52Q8N1V2 620 aa16.04■□□□□ 0.16
SDF4-204ENST00000459994 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.04■□□□□ 0.16
SDF4-204ENST00000459994 OR2I1PQ8NGU4 316 aa16.04■□□□□ 0.16
SDF4-204ENST00000459994 HSPA12BQ96MM6 686 aa16.04■□□□□ 0.16
SDF4-204ENST00000459994 CNTNAP3BQ96NU0 1288 aa16.04■□□□□ 0.16
SDF4-204ENST00000459994 CNTNAP3Q9BZ76 1288 aa16.04■□□□□ 0.16
SDF4-204ENST00000459994 PRDM16Q9HAZ2 1276 aa16.04■□□□□ 0.16
SDF4-204ENST00000459994 PIGVQ9NUD9 493 aa16.04■□□□□ 0.16
SDF4-204ENST00000459994 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.04■□□□□ 0.16
SDF4-204ENST00000459994 USP36Q9P275 1121 aaKnown RBP16.04■□□□□ 0.16
SDF4-204ENST00000459994 INTS6Q9UL03 887 aaKnown RBP16.04■□□□□ 0.16
SDF4-204ENST00000459994 DOCK4Q8N1I0 1966 aa16.04■□□□□ 0.16
SDF4-204ENST00000459994 KCNK5O95279 499 aa16.03■□□□□ 0.16
SDF4-204ENST00000459994 PABPC1P11940 636 aaKnown RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms