RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 OR8D1Q8WZ84 308 aa10.97□□□□□ -0.65
UBR4-208ENST00000459947 TMEM245Q9H330 911 aa10.97□□□□□ -0.65
UBR4-208ENST00000459947 PCSK1NQ9UHG2 260 aa10.97□□□□□ -0.65
UBR4-208ENST00000459947 F5P12259 2224 aa10.96□□□□□ -0.65
UBR4-208ENST00000459947 C1QTNF3-AMACRE9PGA6 284 aa10.96□□□□□ -0.65
UBR4-208ENST00000459947 SGK1O00141 431 aa10.96□□□□□ -0.65
UBR4-208ENST00000459947 CREB3O43889 395 aa10.96□□□□□ -0.65
UBR4-208ENST00000459947 ADH1BP00325 375 aa10.96□□□□□ -0.65
UBR4-208ENST00000459947 RAD51Q06609 339 aa10.96□□□□□ -0.65
UBR4-208ENST00000459947 TCF15Q12870 199 aa10.96□□□□□ -0.65
UBR4-208ENST00000459947 RFTN1Q14699 578 aaPredicted RBP10.96□□□□□ -0.65
UBR4-208ENST00000459947 POLD3Q15054 466 aaPredicted RBP10.96□□□□□ -0.65
UBR4-208ENST00000459947 ELF2Q15723 593 aa10.96□□□□□ -0.65
UBR4-208ENST00000459947 CEP68Q76N32 757 aa10.96□□□□□ -0.65
UBR4-208ENST00000459947 KBTBD6Q86V97 674 aa10.96□□□□□ -0.65
UBR4-208ENST00000459947 RNF10Q8N5U6 811 aaKnown RBP10.96□□□□□ -0.65
UBR4-208ENST00000459947 SPC24Q8NBT2 197 aa10.96□□□□□ -0.65
UBR4-208ENST00000459947 LRIG1Q96JA1 1093 aa10.96□□□□□ -0.65
UBR4-208ENST00000459947 ZNF599Q96NL3 588 aa10.96□□□□□ -0.65
UBR4-208ENST00000459947 NCKAP1Q9Y2A7 1128 aa10.96□□□□□ -0.65
UBR4-208ENST00000459947 MYOFQ9NZM1 2061 aa10.96□□□□□ -0.65
UBR4-208ENST00000459947 TCRBV21S2A2A0A5A6 115 aa10.96□□□□□ -0.65
UBR4-208ENST00000459947 SPOPO43791 374 aa10.96□□□□□ -0.65
UBR4-208ENST00000459947 EPHX1P07099 455 aa10.96□□□□□ -0.65
UBR4-208ENST00000459947 BZW1Q7L1Q6 419 aaKnown RBP10.96□□□□□ -0.65
UBR4-208ENST00000459947 PRCCQ92733 491 aaPredicted RBP10.96□□□□□ -0.65
UBR4-208ENST00000459947 ACE2Q9BYF1 805 aaPredicted RBP10.96□□□□□ -0.65
UBR4-208ENST00000459947 OR51B4Q9Y5P0 310 aa10.96□□□□□ -0.65
UBR4-208ENST00000459947 ZNF318Q5VUA4 2279 aa10.96□□□□□ -0.66
UBR4-208ENST00000459947 DOCK4Q8N1I0 1966 aa10.96□□□□□ -0.66
UBR4-208ENST00000459947 ACADMP11310 421 aa10.96□□□□□ -0.66
UBR4-208ENST00000459947 RENBPP51606 427 aa10.96□□□□□ -0.66
UBR4-208ENST00000459947 SLC25A11Q02978 314 aaKnown RBP10.96□□□□□ -0.66
UBR4-208ENST00000459947 MESDQ14696 234 aa10.96□□□□□ -0.66
UBR4-208ENST00000459947 ALFQ53S48 1182 aa10.96□□□□□ -0.66
UBR4-208ENST00000459947 SH3PXD2AQ5TCZ1 1133 aa10.96□□□□□ -0.66
UBR4-208ENST00000459947 LAIR1Q6GTX8 287 aa10.96□□□□□ -0.66
UBR4-208ENST00000459947 TMCO3Q6UWJ1 677 aa10.96□□□□□ -0.66
UBR4-208ENST00000459947 PGBD3Q8N328 593 aa10.96□□□□□ -0.66
UBR4-208ENST00000459947 ALG14Q96F25 216 aa10.96□□□□□ -0.66
UBR4-208ENST00000459947 CACNA2D2Q9NY47 1150 aa10.96□□□□□ -0.66
UBR4-208ENST00000459947 KDELR3O43731 214 aa10.95□□□□□ -0.66
UBR4-208ENST00000459947 KRT86O43790 486 aa10.95□□□□□ -0.66
UBR4-208ENST00000459947 GSRP00390 522 aa10.95□□□□□ -0.66
UBR4-208ENST00000459947 MX2P20592 715 aa10.95□□□□□ -0.66
UBR4-208ENST00000459947 NUDT1P36639 197 aa10.95□□□□□ -0.66
UBR4-208ENST00000459947 IL12RB1P42701 662 aa10.95□□□□□ -0.66
UBR4-208ENST00000459947 MAPK8P45983 427 aa10.95□□□□□ -0.66
UBR4-208ENST00000459947 ZFYVE27Q5T4F4 411 aa10.95□□□□□ -0.66
UBR4-208ENST00000459947 NAIF1Q69YI7 327 aaPredicted RBP10.95□□□□□ -0.66
UBR4-208ENST00000459947 IL31Q6EBC2 164 aa10.95□□□□□ -0.66
UBR4-208ENST00000459947 ZNF662Q6ZS27 426 aa10.95□□□□□ -0.66
UBR4-208ENST00000459947 USP30Q70CQ3 517 aa10.95□□□□□ -0.66
UBR4-208ENST00000459947 MAML2Q8IZL2 1156 aaPredicted RBP10.95□□□□□ -0.66
UBR4-208ENST00000459947 RBM41Q96IZ5 413 aaKnown RBP10.95□□□□□ -0.66
UBR4-208ENST00000459947 KCTD15Q96SI1 283 aaPredicted RBP10.95□□□□□ -0.66
UBR4-208ENST00000459947 BRD8Q9H0E9 1235 aa10.95□□□□□ -0.66
UBR4-208ENST00000459947 EPC1Q9H2F5 836 aa10.95□□□□□ -0.66
UBR4-208ENST00000459947 ZNF212Q9UDV6 495 aa10.95□□□□□ -0.66
UBR4-208ENST00000459947 GMEB2Q9UKD1 530 aa10.95□□□□□ -0.66
UBR4-208ENST00000459947 CLEC4EQ9ULY5 219 aa10.95□□□□□ -0.66
UBR4-208ENST00000459947 MUC22E2RYF6 1773 aaPredicted RBP10.95□□□□□ -0.66
UBR4-208ENST00000459947 SLC7A4O43246 635 aa10.95□□□□□ -0.66
UBR4-208ENST00000459947 RARAP10276 462 aa10.95□□□□□ -0.66
UBR4-208ENST00000459947 TFDP2Q14188 446 aa10.95□□□□□ -0.66
UBR4-208ENST00000459947 ELAVL3Q14576 367 aaKnown RBP10.95□□□□□ -0.66
UBR4-208ENST00000459947 INO80DQ53TQ3 878 aaPredicted RBP10.95□□□□□ -0.66
UBR4-208ENST00000459947 WFDC5Q8TCV5 224 aa10.95□□□□□ -0.66
UBR4-208ENST00000459947 ARHGEF2Q92974 986 aaKnown RBP10.95□□□□□ -0.66
UBR4-208ENST00000459947 NKD2Q969F2 451 aaPredicted RBP10.95□□□□□ -0.66
UBR4-208ENST00000459947 SPON2Q9BUD6 331 aa10.95□□□□□ -0.66
UBR4-208ENST00000459947 PACSIN1Q9BY11 444 aa10.95□□□□□ -0.66
UBR4-208ENST00000459947 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.95□□□□□ -0.66
UBR4-208ENST00000459947 MPP6Q9NZW5 540 aa10.95□□□□□ -0.66
UBR4-208ENST00000459947 INTS6Q9UL03 887 aaKnown RBP10.95□□□□□ -0.66
UBR4-208ENST00000459947 LRP3O75074 770 aa10.95□□□□□ -0.66
UBR4-208ENST00000459947 ADAM23O75077 832 aa10.95□□□□□ -0.66
UBR4-208ENST00000459947 RPP40O75818 363 aaKnown RBP10.95□□□□□ -0.66
UBR4-208ENST00000459947 CNTN5O94779 1100 aa10.95□□□□□ -0.66
UBR4-208ENST00000459947 DNTTP04053 509 aa10.95□□□□□ -0.66
UBR4-208ENST00000459947 PRNPP04156 253 aa10.95□□□□□ -0.66
UBR4-208ENST00000459947 FNTBP49356 437 aa10.95□□□□□ -0.66
UBR4-208ENST00000459947 CDH6P55285 790 aa10.95□□□□□ -0.66
UBR4-208ENST00000459947 RALGPS1Q5JS13 557 aa10.95□□□□□ -0.66
UBR4-208ENST00000459947 SH2D3CQ8N5H7 860 aa10.95□□□□□ -0.66
UBR4-208ENST00000459947 KCTD6Q8NC69 237 aa10.95□□□□□ -0.66
UBR4-208ENST00000459947 FAM122AQ96E09 287 aa10.95□□□□□ -0.66
UBR4-208ENST00000459947 PPP1R16AQ96I34 528 aa10.95□□□□□ -0.66
UBR4-208ENST00000459947 HHIPQ96QV1 700 aa10.95□□□□□ -0.66
UBR4-208ENST00000459947 PCDH18Q9HCL0 1135 aa10.95□□□□□ -0.66
UBR4-208ENST00000459947 ANLNQ9NQW6 1124 aa10.95□□□□□ -0.66
UBR4-208ENST00000459947 PCDHGA5Q9Y5G8 931 aa10.95□□□□□ -0.66
UBR4-208ENST00000459947 PLXND1Q9Y4D7 1925 aa10.94□□□□□ -0.66
UBR4-208ENST00000459947 SOWAHDA6NJG2 315 aa10.94□□□□□ -0.66
UBR4-208ENST00000459947 MIF4GDA9UHW6 222 aaKnown RBP10.94□□□□□ -0.66
UBR4-208ENST00000459947 IGLV3-19P01714 112 aa10.94□□□□□ -0.66
UBR4-208ENST00000459947 NFKBIAP25963 317 aa10.94□□□□□ -0.66
UBR4-208ENST00000459947 DPYSQ14117 519 aa10.94□□□□□ -0.66
UBR4-208ENST00000459947 PPP6R3Q5H9R7 873 aaPredicted RBP10.94□□□□□ -0.66
UBR4-208ENST00000459947 TFAP2DQ7Z6R9 452 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms