RNA–Protein interactions for RNA: ENST00000458271.6

CSRP1-203, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 2

Gene CSRP1, Length 1,324 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-203ENST00000458271 HOXD12P35452 270 aa12.78□□□□□ -0.36
CSRP1-203ENST00000458271 NNMTP40261 264 aa12.78□□□□□ -0.36
CSRP1-203ENST00000458271 PRKCIP41743 596 aa12.78□□□□□ -0.36
CSRP1-203ENST00000458271 DPP6P42658 865 aa12.78□□□□□ -0.36
CSRP1-203ENST00000458271 ZNF143P52747 638 aaPredicted RBP12.78□□□□□ -0.36
CSRP1-203ENST00000458271 IRX4P78413 519 aa12.78□□□□□ -0.36
CSRP1-203ENST00000458271 ZBTB16Q05516 673 aa12.78□□□□□ -0.36
CSRP1-203ENST00000458271 TTC31Q49AM3 519 aaPredicted RBP12.78□□□□□ -0.36
CSRP1-203ENST00000458271 C6orf118Q5T5N4 469 aa12.78□□□□□ -0.36
CSRP1-203ENST00000458271 STPG1Q5TH74 334 aa12.78□□□□□ -0.36
CSRP1-203ENST00000458271 PPP1R2P3Q6NXS1 205 aa12.78□□□□□ -0.36
CSRP1-203ENST00000458271 SETD3Q86TU7 594 aaPredicted RBP12.78□□□□□ -0.36
CSRP1-203ENST00000458271 DNAAF5Q86Y56 855 aa12.78□□□□□ -0.36
CSRP1-203ENST00000458271 FOXJ1Q92949 421 aa12.78□□□□□ -0.36
CSRP1-203ENST00000458271 ZNF419Q96HQ0 510 aaPredicted RBP12.78□□□□□ -0.36
CSRP1-203ENST00000458271 PPP1R9BQ96SB3 815 aa12.78□□□□□ -0.36
CSRP1-203ENST00000458271 RTKNQ9BST9 563 aa12.78□□□□□ -0.36
CSRP1-203ENST00000458271 NUP58Q9BVL2 599 aa12.78□□□□□ -0.36
CSRP1-203ENST00000458271 ZYG11BQ9C0D3 744 aa12.78□□□□□ -0.36
CSRP1-203ENST00000458271 ZNF212Q9UDV6 495 aa12.78□□□□□ -0.36
CSRP1-203ENST00000458271 OR12D3Q9UGF7 316 aa12.78□□□□□ -0.36
CSRP1-203ENST00000458271 EVLQ9UI08 416 aaPredicted RBP12.78□□□□□ -0.36
CSRP1-203ENST00000458271 A0A0D9SEW6 157 aa12.77□□□□□ -0.37
CSRP1-203ENST00000458271 TARSL2A2RTX5 802 aaKnown RBP12.77□□□□□ -0.37
CSRP1-203ENST00000458271 DCDC2BA2VCK2 349 aa12.77□□□□□ -0.37
CSRP1-203ENST00000458271 FAM72CH0Y354 149 aa12.77□□□□□ -0.37
CSRP1-203ENST00000458271 DDX3XO00571 662 aaKnown RBP eCLIP12.77□□□□□ -0.374e-6■■■■□ 24.2
CSRP1-203ENST00000458271 SNAP91O60641 907 aa12.77□□□□□ -0.37
CSRP1-203ENST00000458271 RNASEH1O60930 286 aaKnown RBP12.77□□□□□ -0.37
CSRP1-203ENST00000458271 CFIP05156 583 aa12.77□□□□□ -0.37
CSRP1-203ENST00000458271 MAOBP27338 520 aa12.77□□□□□ -0.37
CSRP1-203ENST00000458271 OR1E1P30953 314 aa12.77□□□□□ -0.37
CSRP1-203ENST00000458271 ACSL1P33121 698 aa12.77□□□□□ -0.37
CSRP1-203ENST00000458271 PSMD8P48556 350 aa12.77□□□□□ -0.37
CSRP1-203ENST00000458271 LIMK1P53667 647 aa12.77□□□□□ -0.37
CSRP1-203ENST00000458271 OGDHQ02218 1023 aa12.77□□□□□ -0.37
CSRP1-203ENST00000458271 MAMLD1Q13495 774 aa12.77□□□□□ -0.37
CSRP1-203ENST00000458271 CST6Q15828 149 aa12.77□□□□□ -0.37
CSRP1-203ENST00000458271 SYCP2LQ5T4T6 812 aa12.77□□□□□ -0.37
CSRP1-203ENST00000458271 FAM72AQ5TYM5 149 aa12.77□□□□□ -0.37
CSRP1-203ENST00000458271 MANEALQ5VSG8 457 aa12.77□□□□□ -0.37
CSRP1-203ENST00000458271 FAM72DQ6L9T8 149 aa12.77□□□□□ -0.37
CSRP1-203ENST00000458271 DCUN1D2Q6PH85 259 aa12.77□□□□□ -0.37
CSRP1-203ENST00000458271 ERMP1Q7Z2K6 904 aa12.77□□□□□ -0.37
CSRP1-203ENST00000458271 FAM72BQ86X60 149 aa12.77□□□□□ -0.37
CSRP1-203ENST00000458271 MMAAQ8IVH4 418 aaKnown RBP12.77□□□□□ -0.37
CSRP1-203ENST00000458271 RGL4Q8IZJ4 473 aa12.77□□□□□ -0.37
CSRP1-203ENST00000458271 STK40Q8N2I9 435 aa12.77□□□□□ -0.37
CSRP1-203ENST00000458271 CADM4Q8NFZ8 388 aa12.77□□□□□ -0.37
CSRP1-203ENST00000458271 FRS2Q8WU20 508 aa12.77□□□□□ -0.37
CSRP1-203ENST00000458271 PTPRN2Q92932 1015 aa12.77□□□□□ -0.37
CSRP1-203ENST00000458271 VCPIP1Q96JH7 1222 aa12.77□□□□□ -0.37
CSRP1-203ENST00000458271 PSMB7Q99436 277 aa12.77□□□□□ -0.37
CSRP1-203ENST00000458271 C2orf49Q9BVC5 232 aaPredicted RBP12.77□□□□□ -0.37
CSRP1-203ENST00000458271 NUSAP1Q9BXS6 441 aaKnown RBP12.77□□□□□ -0.37
CSRP1-203ENST00000458271 PABPC3Q9H361 631 aaKnown RBP12.77□□□□□ -0.37
CSRP1-203ENST00000458271 PPARGC1AQ9UBK2 798 aaKnown RBP12.77□□□□□ -0.37
CSRP1-203ENST00000458271 SERGEFQ9UGK8 458 aa12.77□□□□□ -0.37
CSRP1-203ENST00000458271 VPS51Q9UID3 782 aa12.77□□□□□ -0.37
CSRP1-203ENST00000458271 NEU3Q9UQ49 428 aa12.77□□□□□ -0.37
CSRP1-203ENST00000458271 SSUH2Q9Y2M2 353 aa12.77□□□□□ -0.37
CSRP1-203ENST00000458271 ADAMTS9Q9P2N4 1935 aa12.77□□□□□ -0.37
CSRP1-203ENST00000458271 PCDH15Q96QU1 1955 aa12.77□□□□□ -0.37
CSRP1-203ENST00000458271 NUMA1Q14980 2115 aa12.77□□□□□ -0.37
CSRP1-203ENST00000458271 GON4LQ3T8J9 2241 aa12.77□□□□□ -0.37
CSRP1-203ENST00000458271 MID1O15344 667 aa12.76□□□□□ -0.37
CSRP1-203ENST00000458271 ATP9BO43861 1147 aa12.76□□□□□ -0.37
CSRP1-203ENST00000458271 FTLP02792 175 aaPredicted RBP12.76□□□□□ -0.37
CSRP1-203ENST00000458271 GYPCP04921 128 aa12.76□□□□□ -0.37
CSRP1-203ENST00000458271 PLEKP08567 350 aaPredicted RBP12.76□□□□□ -0.37
CSRP1-203ENST00000458271 VASPP50552 380 aaPredicted RBP12.76□□□□□ -0.37
CSRP1-203ENST00000458271 KRT83P78385 493 aa12.76□□□□□ -0.37
CSRP1-203ENST00000458271 NRG1Q02297 640 aaPredicted RBP12.76□□□□□ -0.37
CSRP1-203ENST00000458271 SCAPQ12770 1279 aa12.76□□□□□ -0.37
CSRP1-203ENST00000458271 ELAVL3Q14576 367 aaKnown RBP12.76□□□□□ -0.37
CSRP1-203ENST00000458271 DUOXA1Q1HG43 343 aa12.76□□□□□ -0.37
CSRP1-203ENST00000458271 ACCSLQ4AC99 568 aa12.76□□□□□ -0.37
CSRP1-203ENST00000458271 TDRD12Q587J7 1177 aaKnown RBP12.76□□□□□ -0.37
CSRP1-203ENST00000458271 WDR45BQ5MNZ6 344 aa12.76□□□□□ -0.37
CSRP1-203ENST00000458271 DCAF12L1Q5VU92 463 aa12.76□□□□□ -0.37
CSRP1-203ENST00000458271 HGSNATQ68CP4 663 aa12.76□□□□□ -0.37
CSRP1-203ENST00000458271 IL31Q6EBC2 164 aa12.76□□□□□ -0.37
CSRP1-203ENST00000458271 RWDD4Q6NW29 188 aaKnown RBP12.76□□□□□ -0.37
CSRP1-203ENST00000458271 SCYL2Q6P3W7 929 aa12.76□□□□□ -0.37
CSRP1-203ENST00000458271 SLC23A3Q6PIS1 610 aa12.76□□□□□ -0.37
CSRP1-203ENST00000458271 LRSAM1Q6UWE0 723 aa12.76□□□□□ -0.37
CSRP1-203ENST00000458271 LINGO4Q6UY18 593 aa12.76□□□□□ -0.37
CSRP1-203ENST00000458271 Q6ZVU0 165 aa12.76□□□□□ -0.37
CSRP1-203ENST00000458271 TMC6Q7Z403 805 aa12.76□□□□□ -0.37
CSRP1-203ENST00000458271 RABEPKQ7Z6M1 372 aa12.76□□□□□ -0.37
CSRP1-203ENST00000458271 DRC7Q8IY82 874 aa12.76□□□□□ -0.37
CSRP1-203ENST00000458271 SH2D3CQ8N5H7 860 aa12.76□□□□□ -0.37
CSRP1-203ENST00000458271 DCAF4L2Q8NA75 395 aa12.76□□□□□ -0.37
CSRP1-203ENST00000458271 OR7D4Q8NG98 312 aa12.76□□□□□ -0.37
CSRP1-203ENST00000458271 CEP76Q8TAP6 659 aa12.76□□□□□ -0.37
CSRP1-203ENST00000458271 GANCQ8TET4 914 aa12.76□□□□□ -0.37
CSRP1-203ENST00000458271 CPLX3Q8WVH0 158 aa12.76□□□□□ -0.37
CSRP1-203ENST00000458271 NTAN1Q96AB6 310 aa12.76□□□□□ -0.37
CSRP1-203ENST00000458271 FAM129BQ96TA1 746 aa12.76□□□□□ -0.37
CSRP1-203ENST00000458271 CNPY3Q9BT09 278 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms