RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 HAUS8Q9BT25 410 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 TRIM62Q9BVG3 475 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 MRIQ9BWK5 157 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 MRPL4Q9BYD3 311 aaKnown RBP5.61□□□□□ -1.51
VPS41-209ENST00000457055 FAM129AQ9BZQ8 928 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 TASP1Q9H6P5 420 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 C17orf75Q9HAS0 396 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 LY9Q9HBG7 655 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 MID1IP1Q9NPA3 183 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 SERINC1Q9NRX5 453 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 POLR3BQ9NW08 1133 aaPredicted RBP5.61□□□□□ -1.51
VPS41-209ENST00000457055 USP36Q9P275 1121 aaKnown RBP5.61□□□□□ -1.51
VPS41-209ENST00000457055 EIF2AK4Q9P2K8 1649 aaKnown RBP5.61□□□□□ -1.51
VPS41-209ENST00000457055 CACNG4Q9UBN1 327 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 CD300AQ9UGN4 299 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 NWD2Q9ULI1 1742 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 MYO6Q9UM54 1294 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 ZNF510Q9Y2H8 683 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 PCDHB2Q9Y5E7 798 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 COMMD3-BMI1R4GMX3 469 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 USP32Q8NFA0 1604 aa5.6□□□□□ -1.51
VPS41-209ENST00000457055 PASKQ96RG2 1323 aa5.6□□□□□ -1.51
VPS41-209ENST00000457055 C15orf38-AP3S2A0A0A6YYH1 394 aa5.6□□□□□ -1.51
VPS41-209ENST00000457055 A0A1W2PQU0 124 aa5.6□□□□□ -1.51
VPS41-209ENST00000457055 EME2A4GXA9 379 aaPredicted RBP5.6□□□□□ -1.51
VPS41-209ENST00000457055 GCOM1H8Y6P7 765 aaPredicted RBP5.6□□□□□ -1.51
VPS41-209ENST00000457055 TAF4O00268 1085 aa5.6□□□□□ -1.51
VPS41-209ENST00000457055 IFIT3O14879 490 aaKnown RBP5.6□□□□□ -1.51
VPS41-209ENST00000457055 KPNA5O15131 536 aa5.6□□□□□ -1.51
VPS41-209ENST00000457055 ATP8B1O43520 1251 aa5.6□□□□□ -1.51
VPS41-209ENST00000457055 PTP4A3O75365 173 aa5.6□□□□□ -1.51
VPS41-209ENST00000457055 ULK1O75385 1050 aa5.6□□□□□ -1.51
VPS41-209ENST00000457055 DNAJC8O75937 253 aaPredicted RBP5.6□□□□□ -1.51
VPS41-209ENST00000457055 CRTAMO95727 393 aa5.6□□□□□ -1.51
VPS41-209ENST00000457055 HLA-DRAP01903 254 aa5.6□□□□□ -1.51
VPS41-209ENST00000457055 AMHP03971 560 aa5.6□□□□□ -1.51
VPS41-209ENST00000457055 MYZAPP0CAP1 466 aa5.6□□□□□ -1.51
VPS41-209ENST00000457055 IFNAR1P17181 557 aa5.6□□□□□ -1.51
VPS41-209ENST00000457055 BPIP17213 487 aa5.6□□□□□ -1.51
VPS41-209ENST00000457055 PDCP20941 246 aa5.6□□□□□ -1.51
VPS41-209ENST00000457055 AKT1P31749 480 aa5.6□□□□□ -1.51
VPS41-209ENST00000457055 GCKP35557 465 aa5.6□□□□□ -1.51
VPS41-209ENST00000457055 GRK3P35626 688 aa5.6□□□□□ -1.51
VPS41-209ENST00000457055 ACVRL1P37023 503 aa5.6□□□□□ -1.51
VPS41-209ENST00000457055 CBX5P45973 191 aa5.6□□□□□ -1.51
VPS41-209ENST00000457055 GBX2P52951 348 aaPredicted RBP5.6□□□□□ -1.51
VPS41-209ENST00000457055 STARD6P59095 220 aa5.6□□□□□ -1.51
VPS41-209ENST00000457055 YWHAZP63104 245 aaKnown RBP5.6□□□□□ -1.51
VPS41-209ENST00000457055 UBE2IP63279 158 aaKnown RBP5.6□□□□□ -1.51
VPS41-209ENST00000457055 PRKCZQ05513 592 aa5.6□□□□□ -1.51
VPS41-209ENST00000457055 KDSRQ06136 332 aa5.6□□□□□ -1.51
VPS41-209ENST00000457055 NIPAL4Q0D2K0 466 aa5.6□□□□□ -1.51
VPS41-209ENST00000457055 HSPA14Q0VDF9 509 aa5.6□□□□□ -1.51
VPS41-209ENST00000457055 MAPK7Q13164 816 aa5.6□□□□□ -1.51
VPS41-209ENST00000457055 TUSC3Q13454 348 aa5.6□□□□□ -1.51
VPS41-209ENST00000457055 PTK2BQ14289 1009 aa5.6□□□□□ -1.51
VPS41-209ENST00000457055 TRADDQ15628 312 aa5.6□□□□□ -1.51
VPS41-209ENST00000457055 SKIDA1Q1XH10 827 aa5.6□□□□□ -1.51
VPS41-209ENST00000457055 SMU1Q2TAY7 513 aa5.6□□□□□ -1.51
VPS41-209ENST00000457055 INAVAQ3KP66 663 aa5.6□□□□□ -1.51
VPS41-209ENST00000457055 HS1BP3Q53T59 392 aa5.6□□□□□ -1.51
VPS41-209ENST00000457055 SPDYAQ5MJ70 313 aa5.6□□□□□ -1.51
VPS41-209ENST00000457055 FOXB2Q5VYV0 432 aa5.6□□□□□ -1.51
VPS41-209ENST00000457055 ATL3Q6DD88 541 aa5.6□□□□□ -1.51
VPS41-209ENST00000457055 PGM2L1Q6PCE3 622 aa5.6□□□□□ -1.51
VPS41-209ENST00000457055 Q6ZUG5 572 aa5.6□□□□□ -1.51
VPS41-209ENST00000457055 MTDHQ86UE4 582 aaKnown RBP5.6□□□□□ -1.51
VPS41-209ENST00000457055 TMEM200AQ86VY9 491 aa5.6□□□□□ -1.51
VPS41-209ENST00000457055 MCEMP1Q8IX19 187 aa5.6□□□□□ -1.51
VPS41-209ENST00000457055 CACNA2D3Q8IZS8 1091 aa5.6□□□□□ -1.51
VPS41-209ENST00000457055 HDDC3Q8N4P3 179 aa5.6□□□□□ -1.51
VPS41-209ENST00000457055 DPP10Q8N608 796 aa5.6□□□□□ -1.51
VPS41-209ENST00000457055 TSPYL6Q8N831 410 aa5.6□□□□□ -1.51
VPS41-209ENST00000457055 LPCAT1Q8NF37 534 aa5.6□□□□□ -1.51
VPS41-209ENST00000457055 LINS1Q8NG48 757 aa5.6□□□□□ -1.51
VPS41-209ENST00000457055 OR6S1Q8NH40 331 aa5.6□□□□□ -1.51
VPS41-209ENST00000457055 SPPL3Q8TCT6 385 aa5.6□□□□□ -1.51
VPS41-209ENST00000457055 CALML6Q8TD86 181 aa5.6□□□□□ -1.51
VPS41-209ENST00000457055 CLEC4DQ8WXI8 215 aa5.6□□□□□ -1.51
VPS41-209ENST00000457055 SEPT1Q8WYJ6 367 aa5.6□□□□□ -1.51
VPS41-209ENST00000457055 GTF3C6Q969F1 213 aa5.6□□□□□ -1.51
VPS41-209ENST00000457055 SAAL1Q96ER3 474 aa5.6□□□□□ -1.51
VPS41-209ENST00000457055 SLC47A1Q96FL8 570 aa5.6□□□□□ -1.51
VPS41-209ENST00000457055 EXOC2Q96KP1 924 aa5.6□□□□□ -1.51
VPS41-209ENST00000457055 SNX27Q96L92 541 aa5.6□□□□□ -1.51
VPS41-209ENST00000457055 ADAD1Q96M93 576 aaKnown RBP5.6□□□□□ -1.51
VPS41-209ENST00000457055 PRICKLE1Q96MT3 831 aaPredicted RBP5.6□□□□□ -1.51
VPS41-209ENST00000457055 PPP1R10Q96QC0 940 aaKnown RBP5.6□□□□□ -1.51
VPS41-209ENST00000457055 CGREF1Q99674 301 aa5.6□□□□□ -1.51
VPS41-209ENST00000457055 ACO2Q99798 780 aaKnown RBP5.6□□□□□ -1.51
VPS41-209ENST00000457055 SELENOSQ9BQE4 189 aa5.6□□□□□ -1.51
VPS41-209ENST00000457055 LLPHQ9BRT6 129 aaKnown RBP5.6□□□□□ -1.51
VPS41-209ENST00000457055 PACSIN1Q9BY11 444 aa5.6□□□□□ -1.51
VPS41-209ENST00000457055 UNKQ9C0B0 810 aaKnown RBP5.6□□□□□ -1.51
VPS41-209ENST00000457055 REXO4Q9GZR2 422 aaKnown RBP5.6□□□□□ -1.51
VPS41-209ENST00000457055 LRRC19Q9H756 370 aa5.6□□□□□ -1.51
VPS41-209ENST00000457055 ERVMER34-1Q9H9K5 563 aa5.6□□□□□ -1.51
VPS41-209ENST00000457055 FAM114A2Q9NRY5 505 aa5.6□□□□□ -1.51
VPS41-209ENST00000457055 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.6□□□□□ -1.51
VPS41-209ENST00000457055 UCKL1Q9NWZ5 548 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms