RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 MGAT3Q09327 533 aa12.71□□□□□ -0.37
LINC00959-201ENST00000456581 CMPK2Q5EBM0 449 aa12.71□□□□□ -0.37
LINC00959-201ENST00000456581 TEDDM1Q5T9Z0 273 aa12.71□□□□□ -0.37
LINC00959-201ENST00000456581 MBLAC2Q68D91 279 aa12.71□□□□□ -0.37
LINC00959-201ENST00000456581 ZMIZ2Q8NF64 920 aa12.71□□□□□ -0.37
LINC00959-201ENST00000456581 DNAJC1Q96KC8 554 aaKnown RBP12.71□□□□□ -0.37
LINC00959-201ENST00000456581 TMEM209Q96SK2 561 aa12.71□□□□□ -0.37
LINC00959-201ENST00000456581 EPAS1Q99814 870 aa12.71□□□□□ -0.37
LINC00959-201ENST00000456581 SMOQ99835 787 aa12.71□□□□□ -0.37
LINC00959-201ENST00000456581 EBNA1BP2Q99848 306 aaKnown RBP12.71□□□□□ -0.37
LINC00959-201ENST00000456581 FRMD8P1Q9BZ68 369 aaPredicted RBP12.71□□□□□ -0.37
LINC00959-201ENST00000456581 TRIM4Q9C037 500 aa12.71□□□□□ -0.37
LINC00959-201ENST00000456581 MMADHCQ9H3L0 296 aaPredicted RBP12.71□□□□□ -0.37
LINC00959-201ENST00000456581 SPC25Q9HBM1 224 aa12.71□□□□□ -0.37
LINC00959-201ENST00000456581 ANLNQ9NQW6 1124 aa12.71□□□□□ -0.37
LINC00959-201ENST00000456581 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.71□□□□□ -0.37
LINC00959-201ENST00000456581 YJEFN3A6XGL0 299 aa12.7□□□□□ -0.38
LINC00959-201ENST00000456581 I6L893 689 aaPredicted RBP12.7□□□□□ -0.38
LINC00959-201ENST00000456581 XPO1O14980 1071 aaKnown RBP12.7□□□□□ -0.38
LINC00959-201ENST00000456581 MAGEC1O60732 1142 aa12.7□□□□□ -0.38
LINC00959-201ENST00000456581 KRT38O76015 456 aa12.7□□□□□ -0.38
LINC00959-201ENST00000456581 B3GAT3O94766 335 aa12.7□□□□□ -0.38
LINC00959-201ENST00000456581 PRKCGP05129 697 aa12.7□□□□□ -0.38
LINC00959-201ENST00000456581 TKTL1P51854 596 aa12.7□□□□□ -0.38
LINC00959-201ENST00000456581 ROR2Q01974 943 aaKnown RBP12.7□□□□□ -0.38
LINC00959-201ENST00000456581 DLG2Q15700 870 aa12.7□□□□□ -0.38
LINC00959-201ENST00000456581 SMYD5Q6GMV2 418 aa12.7□□□□□ -0.38
LINC00959-201ENST00000456581 NET1Q7Z628 596 aaPredicted RBP12.7□□□□□ -0.38
LINC00959-201ENST00000456581 TOP6BLQ8N6T0 577 aa12.7□□□□□ -0.38
LINC00959-201ENST00000456581 GSDMBQ8TAX9 411 aa12.7□□□□□ -0.38
LINC00959-201ENST00000456581 CENPIQ92674 756 aaPredicted RBP12.7□□□□□ -0.38
LINC00959-201ENST00000456581 ADAM2Q99965 735 aa12.7□□□□□ -0.38
LINC00959-201ENST00000456581 TUBB6Q9BUF5 446 aa12.7□□□□□ -0.38
LINC00959-201ENST00000456581 ULBP1Q9BZM6 244 aa12.7□□□□□ -0.38
LINC00959-201ENST00000456581 FAM124BQ9H5Z6 455 aaPredicted RBP12.7□□□□□ -0.38
LINC00959-201ENST00000456581 PNPLA8Q9NP80 782 aa12.7□□□□□ -0.38
LINC00959-201ENST00000456581 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.7□□□□□ -0.38
LINC00959-201ENST00000456581 A0A1B0GTW7 788 aa12.7□□□□□ -0.38
LINC00959-201ENST00000456581 FAM159BA6NKW6 160 aa12.7□□□□□ -0.38
LINC00959-201ENST00000456581 SIN3BO75182 1162 aa12.7□□□□□ -0.38
LINC00959-201ENST00000456581 FYNP06241 537 aa12.7□□□□□ -0.38
LINC00959-201ENST00000456581 PYGLP06737 847 aa12.7□□□□□ -0.38
LINC00959-201ENST00000456581 USP17L7P0C7H9 530 aa12.7□□□□□ -0.38
LINC00959-201ENST00000456581 DESP17661 470 aa12.7□□□□□ -0.38
LINC00959-201ENST00000456581 MGAT1P26572 445 aa12.7□□□□□ -0.38
LINC00959-201ENST00000456581 PTPN9P43378 593 aa12.7□□□□□ -0.38
LINC00959-201ENST00000456581 SLC1A6P48664 564 aa12.7□□□□□ -0.38
LINC00959-201ENST00000456581 LPIN1Q14693 890 aa12.7□□□□□ -0.38
LINC00959-201ENST00000456581 PDK2Q15119 407 aa12.7□□□□□ -0.38
LINC00959-201ENST00000456581 RASIP1Q5U651 963 aa12.7□□□□□ -0.38
LINC00959-201ENST00000456581 FBXL19Q6PCT2 694 aa12.7□□□□□ -0.38
LINC00959-201ENST00000456581 CSPG4P5Q96PW8 444 aa12.7□□□□□ -0.38
LINC00959-201ENST00000456581 CAB39LQ9H9S4 337 aa12.7□□□□□ -0.38
LINC00959-201ENST00000456581 LRRC4Q9HBW1 653 aa12.7□□□□□ -0.38
LINC00959-201ENST00000456581 ETAA1Q9NY74 926 aa12.7□□□□□ -0.38
LINC00959-201ENST00000456581 TMEM216Q9P0N5 145 aa12.7□□□□□ -0.38
LINC00959-201ENST00000456581 E9PBE3 544 aa12.7□□□□□ -0.38
LINC00959-201ENST00000456581 GOLGA8TH3BQL2 631 aa12.7□□□□□ -0.38
LINC00959-201ENST00000456581 NDC80O14777 642 aa12.7□□□□□ -0.38
LINC00959-201ENST00000456581 B4GALT3O60512 393 aa12.7□□□□□ -0.38
LINC00959-201ENST00000456581 KLHL41O60662 606 aa12.7□□□□□ -0.38
LINC00959-201ENST00000456581 CRHR1P34998 444 aa12.7□□□□□ -0.38
LINC00959-201ENST00000456581 MATKP42679 507 aa12.7□□□□□ -0.38
LINC00959-201ENST00000456581 RPL34P49207 117 aaKnown RBP12.7□□□□□ -0.38
LINC00959-201ENST00000456581 SNX16P57768 344 aa12.7□□□□□ -0.38
LINC00959-201ENST00000456581 CCNIQ14094 377 aa12.7□□□□□ -0.38
LINC00959-201ENST00000456581 PCLAFQ15004 111 aa12.7□□□□□ -0.38
LINC00959-201ENST00000456581 SLC9A4Q6AI14 798 aa12.7□□□□□ -0.38
LINC00959-201ENST00000456581 FRMD7Q6ZUT3 714 aa12.7□□□□□ -0.38
LINC00959-201ENST00000456581 EGFL6Q8IUX8 553 aa12.7□□□□□ -0.38
LINC00959-201ENST00000456581 PLD6Q8N2A8 252 aaKnown RBP12.7□□□□□ -0.38
LINC00959-201ENST00000456581 EDEM1Q92611 657 aa12.7□□□□□ -0.38
LINC00959-201ENST00000456581 HSFY1Q96LI6 401 aa12.7□□□□□ -0.38
LINC00959-201ENST00000456581 SORT1Q99523 831 aa12.7□□□□□ -0.38
LINC00959-201ENST00000456581 PIGVQ9NUD9 493 aa12.7□□□□□ -0.38
LINC00959-201ENST00000456581 SNX10Q9Y5X0 201 aa12.7□□□□□ -0.38
LINC00959-201ENST00000456581 GOLGA8QA0A0J9YX86 632 aa12.69□□□□□ -0.38
LINC00959-201ENST00000456581 GOLGA8OA6NCC3 632 aa12.69□□□□□ -0.38
LINC00959-201ENST00000456581 MAGEA13PA6NCF6 341 aa12.69□□□□□ -0.38
LINC00959-201ENST00000456581 GOLGA8NF8WBI6 632 aa12.69□□□□□ -0.38
LINC00959-201ENST00000456581 FAM72CH0Y354 149 aa12.69□□□□□ -0.38
LINC00959-201ENST00000456581 M0QYT0 321 aa12.69□□□□□ -0.38
LINC00959-201ENST00000456581 MDM4O15151 490 aa12.69□□□□□ -0.38
LINC00959-201ENST00000456581 DCXO43602 365 aa12.69□□□□□ -0.38
LINC00959-201ENST00000456581 CREB3O43889 395 aa12.69□□□□□ -0.38
LINC00959-201ENST00000456581 SERPINA6P08185 405 aa12.69□□□□□ -0.38
LINC00959-201ENST00000456581 APLP1P51693 650 aa12.69□□□□□ -0.38
LINC00959-201ENST00000456581 ASPHQ12797 758 aa12.69□□□□□ -0.38
LINC00959-201ENST00000456581 ITGA9Q13797 1035 aa12.69□□□□□ -0.38
LINC00959-201ENST00000456581 RABGAP1LQ5R372 815 aa12.69□□□□□ -0.38
LINC00959-201ENST00000456581 FAM72AQ5TYM5 149 aa12.69□□□□□ -0.38
LINC00959-201ENST00000456581 FAM72DQ6L9T8 149 aa12.69□□□□□ -0.38
LINC00959-201ENST00000456581 SATL1Q86VE3 508 aa12.69□□□□□ -0.38
LINC00959-201ENST00000456581 FAM72BQ86X60 149 aa12.69□□□□□ -0.38
LINC00959-201ENST00000456581 DEFB107AQ8IZN7 70 aa12.69□□□□□ -0.38
LINC00959-201ENST00000456581 RNF148Q8N7C7 305 aa12.69□□□□□ -0.38
LINC00959-201ENST00000456581 ACVR1CQ8NER5 493 aa12.69□□□□□ -0.38
LINC00959-201ENST00000456581 GBP5Q96PP8 586 aa12.69□□□□□ -0.38
LINC00959-201ENST00000456581 RTP3Q9BQQ7 232 aa12.69□□□□□ -0.38
LINC00959-201ENST00000456581 UNKQ9C0B0 810 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms