RNA–Protein interactions for RNA: ENST00000454354.1

USP40-210, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2

Gene USP40, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-210ENST00000454354 GRIK2Q13002 908 aa12.38□□□□□ -0.43
USP40-210ENST00000454354 SLC14A1Q13336 389 aa12.38□□□□□ -0.43
USP40-210ENST00000454354 ZNF177Q13360 481 aaPredicted RBP12.38□□□□□ -0.43
USP40-210ENST00000454354 ELAVL3Q14576 367 aaKnown RBP12.38□□□□□ -0.43
USP40-210ENST00000454354 ANO6Q4KMQ2 910 aa12.38□□□□□ -0.43
USP40-210ENST00000454354 ALFQ53S48 1182 aa12.38□□□□□ -0.43
USP40-210ENST00000454354 SETD3Q86TU7 594 aaPredicted RBP12.38□□□□□ -0.43
USP40-210ENST00000454354 FAM131CQ96AQ9 280 aa12.38□□□□□ -0.43
USP40-210ENST00000454354 HAPLN3Q96S86 360 aa12.38□□□□□ -0.43
USP40-210ENST00000454354 PCDHB18PQ96TA0 734 aa12.38□□□□□ -0.43
USP40-210ENST00000454354 C11orf70Q9BRQ4 267 aa12.38□□□□□ -0.43
USP40-210ENST00000454354 NAT10Q9H0A0 1025 aaKnown RBP12.38□□□□□ -0.43
USP40-210ENST00000454354 SIK2Q9H0K1 926 aa12.38□□□□□ -0.43
USP40-210ENST00000454354 ZNF212Q9UDV6 495 aa12.38□□□□□ -0.43
USP40-210ENST00000454354 SERGEFQ9UGK8 458 aa12.38□□□□□ -0.43
USP40-210ENST00000454354 EIF2B4Q9UI10 523 aaKnown RBP12.38□□□□□ -0.43
USP40-210ENST00000454354 SLC25A13Q9UJS0 675 aa12.38□□□□□ -0.43
USP40-210ENST00000454354 FZD4Q9ULV1 537 aa12.38□□□□□ -0.43
USP40-210ENST00000454354 NCKAP1Q9Y2A7 1128 aa12.38□□□□□ -0.43
USP40-210ENST00000454354 ASPMQ8IZT6 3477 aa12.37□□□□□ -0.43
USP40-210ENST00000454354 FAM170AA1A519 330 aa12.37□□□□□ -0.43
USP40-210ENST00000454354 C2CD4BA6NLJ0 364 aa12.37□□□□□ -0.43
USP40-210ENST00000454354 E9PAM4 449 aa12.37□□□□□ -0.43
USP40-210ENST00000454354 ALOX15BO15296 676 aa12.37□□□□□ -0.43
USP40-210ENST00000454354 MID1O15344 667 aa12.37□□□□□ -0.43
USP40-210ENST00000454354 PTPN9P43378 593 aa12.37□□□□□ -0.43
USP40-210ENST00000454354 NSFP46459 744 aaKnown RBP12.37□□□□□ -0.43
USP40-210ENST00000454354 BNC1Q01954 994 aa12.37□□□□□ -0.43
USP40-210ENST00000454354 ZNF252P-AS1Q0IIN9 211 aa12.37□□□□□ -0.43
USP40-210ENST00000454354 CLEC16AQ2KHT3 1053 aa12.37□□□□□ -0.43
USP40-210ENST00000454354 LRRC31Q6UY01 552 aa12.37□□□□□ -0.43
USP40-210ENST00000454354 PHF13Q86YI8 300 aaPredicted RBP12.37□□□□□ -0.43
USP40-210ENST00000454354 MMAAQ8IVH4 418 aaKnown RBP12.37□□□□□ -0.43
USP40-210ENST00000454354 STK40Q8N2I9 435 aa12.37□□□□□ -0.43
USP40-210ENST00000454354 HDDC3Q8N4P3 179 aa12.37□□□□□ -0.43
USP40-210ENST00000454354 SH2D3CQ8N5H7 860 aa12.37□□□□□ -0.43
USP40-210ENST00000454354 EMC1Q8N766 993 aa12.37□□□□□ -0.43
USP40-210ENST00000454354 DEFB124Q8NES8 71 aa12.37□□□□□ -0.43
USP40-210ENST00000454354 OR2I1PQ8NGU4 316 aa12.37□□□□□ -0.43
USP40-210ENST00000454354 SLC30A5Q8TAD4 765 aa12.37□□□□□ -0.43
USP40-210ENST00000454354 BIRC7Q96CA5 298 aa12.37□□□□□ -0.43
USP40-210ENST00000454354 PCMTD1Q96MG8 357 aaPredicted RBP12.37□□□□□ -0.43
USP40-210ENST00000454354 PSMB7Q99436 277 aa12.37□□□□□ -0.43
USP40-210ENST00000454354 ORAI3Q9BRQ5 295 aa12.37□□□□□ -0.43
USP40-210ENST00000454354 MIR1-1HGQ9H1L0 117 aa12.37□□□□□ -0.43
USP40-210ENST00000454354 TMPRSS4Q9NRS4 437 aa12.37□□□□□ -0.43
USP40-210ENST00000454354 FBXL12Q9NXK8 326 aa12.37□□□□□ -0.43
USP40-210ENST00000454354 VPS28Q9UK41 221 aa12.37□□□□□ -0.43
USP40-210ENST00000454354 HS3ST2Q9Y278 367 aa12.37□□□□□ -0.43
USP40-210ENST00000454354 SNX10Q9Y5X0 201 aa12.37□□□□□ -0.43
USP40-210ENST00000454354 SLCO1B1Q9Y6L6 691 aa12.37□□□□□ -0.43
USP40-210ENST00000454354 IGF2RP11717 2491 aa12.37□□□□□ -0.43
USP40-210ENST00000454354 A0A1W2PP55 124 aa12.36□□□□□ -0.43
USP40-210ENST00000454354 CALB1P05937 261 aa12.36□□□□□ -0.43
USP40-210ENST00000454354 IGHV4-34P06331 123 aa12.36□□□□□ -0.43
USP40-210ENST00000454354 RHOCP08134 193 aa12.36□□□□□ -0.43
USP40-210ENST00000454354 ZNF883P0CG24 379 aa12.36□□□□□ -0.43
USP40-210ENST00000454354 CD59P13987 128 aa12.36□□□□□ -0.43
USP40-210ENST00000454354 VAV1P15498 845 aa12.36□□□□□ -0.43
USP40-210ENST00000454354 C5AR1P21730 350 aa12.36□□□□□ -0.43
USP40-210ENST00000454354 CD27P26842 260 aa12.36□□□□□ -0.43
USP40-210ENST00000454354 SDC4P31431 198 aa12.36□□□□□ -0.43
USP40-210ENST00000454354 SLC8A1P32418 973 aa12.36□□□□□ -0.43
USP40-210ENST00000454354 GRIA4P48058 902 aa12.36□□□□□ -0.43
USP40-210ENST00000454354 PSMD8P48556 350 aa12.36□□□□□ -0.43
USP40-210ENST00000454354 NUMBP49757 651 aa12.36□□□□□ -0.43
USP40-210ENST00000454354 AFF3P51826 1226 aaKnown RBP12.36□□□□□ -0.43
USP40-210ENST00000454354 NRG1Q02297 640 aaPredicted RBP12.36□□□□□ -0.43
USP40-210ENST00000454354 CCDC14Q49A88 953 aa12.36□□□□□ -0.43
USP40-210ENST00000454354 C6orf118Q5T5N4 469 aa12.36□□□□□ -0.43
USP40-210ENST00000454354 MANEALQ5VSG8 457 aa12.36□□□□□ -0.43
USP40-210ENST00000454354 IL27RAQ6UWB1 636 aa12.36□□□□□ -0.43
USP40-210ENST00000454354 ZNF783Q6ZMS7 281 aa12.36□□□□□ -0.43
USP40-210ENST00000454354 MON1BQ7L1V2 547 aa12.36□□□□□ -0.43
USP40-210ENST00000454354 STRADAQ7RTN6 431 aa12.36□□□□□ -0.43
USP40-210ENST00000454354 FAM131BQ86XD5 332 aa12.36□□□□□ -0.43
USP40-210ENST00000454354 AADATQ8N5Z0 425 aa12.36□□□□□ -0.43
USP40-210ENST00000454354 DCAF4L2Q8NA75 395 aa12.36□□□□□ -0.43
USP40-210ENST00000454354 C3orf20Q8ND61 904 aa12.36□□□□□ -0.43
USP40-210ENST00000454354 JOSD2Q8TAC2 188 aa12.36□□□□□ -0.43
USP40-210ENST00000454354 RXFP2Q8WXD0 754 aa12.36□□□□□ -0.43
USP40-210ENST00000454354 SNX19Q92543 992 aa12.36□□□□□ -0.43
USP40-210ENST00000454354 CENPIQ92674 756 aaPredicted RBP12.36□□□□□ -0.43
USP40-210ENST00000454354 FUCA2Q9BTY2 467 aa12.36□□□□□ -0.43
USP40-210ENST00000454354 C2orf49Q9BVC5 232 aaPredicted RBP12.36□□□□□ -0.43
USP40-210ENST00000454354 MUC3BQ9H195 1237 aa12.36□□□□□ -0.43
USP40-210ENST00000454354 SLC32A1Q9H598 525 aa12.36□□□□□ -0.43
USP40-210ENST00000454354 RTN4Q9NQC3 1192 aaKnown RBP12.36□□□□□ -0.43
USP40-210ENST00000454354 MPP6Q9NZW5 540 aa12.36□□□□□ -0.43
USP40-210ENST00000454354 ADAM22Q9P0K1 906 aa12.36□□□□□ -0.43
USP40-210ENST00000454354 PPARGC1AQ9UBK2 798 aaKnown RBP12.36□□□□□ -0.43
USP40-210ENST00000454354 VPS51Q9UID3 782 aa12.36□□□□□ -0.43
USP40-210ENST00000454354 ANGPTL2Q9UKU9 493 aa12.36□□□□□ -0.43
USP40-210ENST00000454354 MYO6Q9UM54 1294 aa12.36□□□□□ -0.43
USP40-210ENST00000454354 PTPRBP23467 1997 aa12.36□□□□□ -0.43
USP40-210ENST00000454354 WDFY3Q8IZQ1 3526 aa12.36□□□□□ -0.43
USP40-210ENST00000454354 COL5A1P20908 1838 aaPredicted RBP12.35□□□□□ -0.43
USP40-210ENST00000454354 TCRBV5S1A1TA0A578 114 aa12.35□□□□□ -0.43
USP40-210ENST00000454354 LRRC72A6NJI9 287 aa12.35□□□□□ -0.43
USP40-210ENST00000454354 SMTNL1A8MU46 457 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms