RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 MPP6Q9NZW5 540 aa14.97□□□□□ -0.01
HSPG2-207ENST00000453796 NEU3Q9UQ49 428 aa14.97□□□□□ -0.01
HSPG2-207ENST00000453796 CNOT1A5YKK6 2376 aaKnown RBP14.97□□□□□ -0.01
HSPG2-207ENST00000453796 PLXNA2O75051 1894 aa14.97□□□□□ -0.01
HSPG2-207ENST00000453796 MED19A0JLT2 244 aaPredicted RBP14.96□□□□□ -0.01
HSPG2-207ENST00000453796 ATP9BO43861 1147 aa14.96□□□□□ -0.01
HSPG2-207ENST00000453796 DNTTP04053 509 aa14.96□□□□□ -0.01
HSPG2-207ENST00000453796 SERPINF2P08697 491 aa14.96□□□□□ -0.01
HSPG2-207ENST00000453796 VAV1P15498 845 aa14.96□□□□□ -0.01
HSPG2-207ENST00000453796 GPD1P21695 349 aa14.96□□□□□ -0.01
HSPG2-207ENST00000453796 MAOBP27338 520 aa14.96□□□□□ -0.01
HSPG2-207ENST00000453796 RPL7AP62424 266 aaKnown RBP14.96□□□□□ -0.01
HSPG2-207ENST00000453796 ASIC2Q16515 512 aa14.96□□□□□ -0.01
HSPG2-207ENST00000453796 SYCP2LQ5T4T6 812 aa14.96□□□□□ -0.01
HSPG2-207ENST00000453796 DCAF12L1Q5VU92 463 aa14.96□□□□□ -0.01
HSPG2-207ENST00000453796 LRRC31Q6UY01 552 aa14.96□□□□□ -0.01
HSPG2-207ENST00000453796 ZNF571Q7Z3V5 609 aaPredicted RBP14.96□□□□□ -0.01
HSPG2-207ENST00000453796 RABEPKQ7Z6M1 372 aa14.96□□□□□ -0.01
HSPG2-207ENST00000453796 FAM172AQ8WUF8 416 aa14.96□□□□□ -0.01
HSPG2-207ENST00000453796 VCPIP1Q96JH7 1222 aa14.96□□□□□ -0.01
HSPG2-207ENST00000453796 PPP1R9BQ96SB3 815 aa14.96□□□□□ -0.01
HSPG2-207ENST00000453796 NUSAP1Q9BXS6 441 aaKnown RBP14.96□□□□□ -0.01
HSPG2-207ENST00000453796 MAGEB5Q9BZ81 275 aa14.96□□□□□ -0.01
HSPG2-207ENST00000453796 OSBPL2Q9H1P3 480 aa14.96□□□□□ -0.01
HSPG2-207ENST00000453796 PABPC3Q9H361 631 aaKnown RBP14.96□□□□□ -0.01
HSPG2-207ENST00000453796 HAUS4Q9H6D7 363 aa14.96□□□□□ -0.01
HSPG2-207ENST00000453796 PPARGC1AQ9UBK2 798 aaKnown RBP14.96□□□□□ -0.01
HSPG2-207ENST00000453796 SERGEFQ9UGK8 458 aa14.96□□□□□ -0.01
HSPG2-207ENST00000453796 SCML1Q9UN30 329 aa14.96□□□□□ -0.01
HSPG2-207ENST00000453796 A0A0D9SEW6 157 aa14.95□□□□□ -0.02
HSPG2-207ENST00000453796 C4orf47A7E2U8 309 aa14.95□□□□□ -0.02
HSPG2-207ENST00000453796 C10orf142B7Z368 130 aa14.95□□□□□ -0.02
HSPG2-207ENST00000453796 CCP110O43303 1012 aa14.95□□□□□ -0.02
HSPG2-207ENST00000453796 RHOCP08134 193 aa14.95□□□□□ -0.02
HSPG2-207ENST00000453796 ENGP17813 658 aa14.95□□□□□ -0.02
HSPG2-207ENST00000453796 TNFAIP3P21580 790 aa14.95□□□□□ -0.02
HSPG2-207ENST00000453796 RRM1P23921 792 aa14.95□□□□□ -0.02
HSPG2-207ENST00000453796 NNMTP40261 264 aa14.95□□□□□ -0.02
HSPG2-207ENST00000453796 CST6Q15828 149 aa14.95□□□□□ -0.02
HSPG2-207ENST00000453796 SKOR2Q2VWA4 1001 aaPredicted RBP14.95□□□□□ -0.02
HSPG2-207ENST00000453796 TTC31Q49AM3 519 aaPredicted RBP14.95□□□□□ -0.02
HSPG2-207ENST00000453796 WDR45BQ5MNZ6 344 aa14.95□□□□□ -0.02
HSPG2-207ENST00000453796 SFMBT2Q5VUG0 894 aa14.95□□□□□ -0.02
HSPG2-207ENST00000453796 IL31Q6EBC2 164 aa14.95□□□□□ -0.02
HSPG2-207ENST00000453796 DNAJC24Q6P3W2 148 aa14.95□□□□□ -0.02
HSPG2-207ENST00000453796 USP30Q70CQ3 517 aa14.95□□□□□ -0.02
HSPG2-207ENST00000453796 TFAP2DQ7Z6R9 452 aa14.95□□□□□ -0.02
HSPG2-207ENST00000453796 FAM124AQ86V42 546 aa14.95□□□□□ -0.02
HSPG2-207ENST00000453796 STK40Q8N2I9 435 aa14.95□□□□□ -0.02
HSPG2-207ENST00000453796 SH2D3CQ8N5H7 860 aa14.95□□□□□ -0.02
HSPG2-207ENST00000453796 CCDC185Q8N715 623 aa14.95□□□□□ -0.02
HSPG2-207ENST00000453796 C1orf216Q8TAB5 229 aa14.95□□□□□ -0.02
HSPG2-207ENST00000453796 NTAN1Q96AB6 310 aa14.95□□□□□ -0.02
HSPG2-207ENST00000453796 MCEEQ96PE7 176 aa14.95□□□□□ -0.02
HSPG2-207ENST00000453796 ZYG11BQ9C0D3 744 aa14.95□□□□□ -0.02
HSPG2-207ENST00000453796 BTBD1Q9H0C5 482 aa14.95□□□□□ -0.02
HSPG2-207ENST00000453796 C6orf106Q9H6K1 298 aaPredicted RBP14.95□□□□□ -0.02
HSPG2-207ENST00000453796 TMEM9BQ9NQ34 198 aa14.95□□□□□ -0.02
HSPG2-207ENST00000453796 FSCN3Q9NQT6 498 aa14.95□□□□□ -0.02
HSPG2-207ENST00000453796 OR12D3Q9UGF7 316 aa14.95□□□□□ -0.02
HSPG2-207ENST00000453796 SLC25A13Q9UJS0 675 aa14.95□□□□□ -0.02
HSPG2-207ENST00000453796 VPS28Q9UK41 221 aa14.95□□□□□ -0.02
HSPG2-207ENST00000453796 SLC6A14Q9UN76 642 aa14.95□□□□□ -0.02
HSPG2-207ENST00000453796 HS3ST2Q9Y278 367 aa14.95□□□□□ -0.02
HSPG2-207ENST00000453796 DOCK9Q9BZ29 2069 aa14.95□□□□□ -0.02
HSPG2-207ENST00000453796 TMEM131Q92545 1883 aa14.95□□□□□ -0.02
HSPG2-207ENST00000453796 SPTBN2O15020 2390 aa14.95□□□□□ -0.02
HSPG2-207ENST00000453796 A0A1W2PQJ5 194 aa14.94□□□□□ -0.02
HSPG2-207ENST00000453796 FAM72CH0Y354 149 aa14.94□□□□□ -0.02
HSPG2-207ENST00000453796 DDX3XO00571 662 aaKnown RBP eCLIP14.94□□□□□ -0.02
HSPG2-207ENST00000453796 MID1O15344 667 aa14.94□□□□□ -0.02
HSPG2-207ENST00000453796 SNAP91O60641 907 aa14.94□□□□□ -0.02
HSPG2-207ENST00000453796 SRGAP2O75044 1071 aa14.94□□□□□ -0.02
HSPG2-207ENST00000453796 SEMA4FO95754 770 aa14.94□□□□□ -0.02
HSPG2-207ENST00000453796 CFIP05156 583 aa14.94□□□□□ -0.02
HSPG2-207ENST00000453796 GZMAP12544 262 aa14.94□□□□□ -0.02
HSPG2-207ENST00000453796 SRCP12931 536 aa14.94□□□□□ -0.02
HSPG2-207ENST00000453796 OR1E1P30953 314 aa14.94□□□□□ -0.02
HSPG2-207ENST00000453796 ZNF143P52747 638 aaPredicted RBP14.94□□□□□ -0.02
HSPG2-207ENST00000453796 UBASH3AP57075 661 aa14.94□□□□□ -0.02
HSPG2-207ENST00000453796 TPM4P67936 248 aa14.94□□□□□ -0.02
HSPG2-207ENST00000453796 OGDHQ02218 1023 aa14.94□□□□□ -0.02
HSPG2-207ENST00000453796 SCAPQ12770 1279 aa14.94□□□□□ -0.02
HSPG2-207ENST00000453796 ARL13BQ3SXY8 428 aa14.94□□□□□ -0.02
HSPG2-207ENST00000453796 FAM72AQ5TYM5 149 aa14.94□□□□□ -0.02
HSPG2-207ENST00000453796 PLEKHA7Q6IQ23 1121 aa14.94□□□□□ -0.02
HSPG2-207ENST00000453796 FAM72DQ6L9T8 149 aa14.94□□□□□ -0.02
HSPG2-207ENST00000453796 PPP1R2P3Q6NXS1 205 aa14.94□□□□□ -0.02
HSPG2-207ENST00000453796 ZNF783Q6ZMS7 281 aa14.94□□□□□ -0.02
HSPG2-207ENST00000453796 NLRP14Q86W24 1093 aa14.94□□□□□ -0.02
HSPG2-207ENST00000453796 FAM72BQ86X60 149 aa14.94□□□□□ -0.02
HSPG2-207ENST00000453796 DNAAF5Q86Y56 855 aa14.94□□□□□ -0.02
HSPG2-207ENST00000453796 MMAAQ8IVH4 418 aaKnown RBP14.94□□□□□ -0.02
HSPG2-207ENST00000453796 RGL4Q8IZJ4 473 aa14.94□□□□□ -0.02
HSPG2-207ENST00000453796 DCAF4L2Q8NA75 395 aa14.94□□□□□ -0.02
HSPG2-207ENST00000453796 FAM131CQ96AQ9 280 aa14.94□□□□□ -0.02
HSPG2-207ENST00000453796 MUC3BQ9H195 1237 aa14.94□□□□□ -0.02
HSPG2-207ENST00000453796 SGK2Q9HBY8 427 aa14.94□□□□□ -0.02
HSPG2-207ENST00000453796 SUSD2Q9UGT4 822 aa14.94□□□□□ -0.02
HSPG2-207ENST00000453796 ADAMTS1Q9UHI8 967 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms