RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 STK32AQ8WU08 396 aa14.74□□□□□ -0.05
LYSMD3-202ENST00000453259 SNRNP27Q8WVK2 155 aaKnown RBP14.74□□□□□ -0.05
LYSMD3-202ENST00000453259 FOXD4L4Q8WXT5 416 aaPredicted RBP14.74□□□□□ -0.05
LYSMD3-202ENST00000453259 ERCC4Q92889 916 aaPredicted RBP14.74□□□□□ -0.05
LYSMD3-202ENST00000453259 HIC2Q96JB3 615 aa14.74□□□□□ -0.05
LYSMD3-202ENST00000453259 SPATA32Q96LK8 384 aa14.74□□□□□ -0.05
LYSMD3-202ENST00000453259 DEPDC7Q96QD5 511 aa14.74□□□□□ -0.05
LYSMD3-202ENST00000453259 SRRTQ9BXP5 876 aaKnown RBP14.74□□□□□ -0.05
LYSMD3-202ENST00000453259 DPH1Q9BZG8 443 aa14.74□□□□□ -0.05
LYSMD3-202ENST00000453259 METTL14Q9HCE5 456 aaKnown RBP14.74□□□□□ -0.05
LYSMD3-202ENST00000453259 ARMCX3Q9UH62 379 aaPredicted RBP14.74□□□□□ -0.05
LYSMD3-202ENST00000453259 SLC12A6Q9UHW9 1150 aa14.74□□□□□ -0.05
LYSMD3-202ENST00000453259 MYLKQ15746 1914 aa14.74□□□□□ -0.05
LYSMD3-202ENST00000453259 A0A1B0GVM2 712 aa14.73□□□□□ -0.05
LYSMD3-202ENST00000453259 A0A1W2PQ27 194 aa14.73□□□□□ -0.05
LYSMD3-202ENST00000453259 A0A1W2PQ64 194 aa14.73□□□□□ -0.05
LYSMD3-202ENST00000453259 TCAF2A6NFQ2 919 aa14.73□□□□□ -0.05
LYSMD3-202ENST00000453259 F5H5T6 163 aa14.73□□□□□ -0.05
LYSMD3-202ENST00000453259 GABBR2O75899 941 aa14.73□□□□□ -0.05
LYSMD3-202ENST00000453259 MT-CO3P00414 261 aa14.73□□□□□ -0.05
LYSMD3-202ENST00000453259 FYNP06241 537 aa14.73□□□□□ -0.05
LYSMD3-202ENST00000453259 PRR29P0C7W0 189 aa14.73□□□□□ -0.05
LYSMD3-202ENST00000453259 CKMT1AP12532 417 aa14.73□□□□□ -0.05
LYSMD3-202ENST00000453259 CTSOP43234 321 aaPredicted RBP14.73□□□□□ -0.05
LYSMD3-202ENST00000453259 RGS7P49802 495 aa14.73□□□□□ -0.05
LYSMD3-202ENST00000453259 NDUFA8P51970 172 aa14.73□□□□□ -0.05
LYSMD3-202ENST00000453259 CLDN6P56747 220 aa14.73□□□□□ -0.05
LYSMD3-202ENST00000453259 CXADRP78310 365 aa14.73□□□□□ -0.05
LYSMD3-202ENST00000453259 DAB2P98082 770 aa14.73□□□□□ -0.05
LYSMD3-202ENST00000453259 CETN1Q12798 172 aa14.73□□□□□ -0.05
LYSMD3-202ENST00000453259 RABGAP1LQ5R372 815 aa14.73□□□□□ -0.05
LYSMD3-202ENST00000453259 CDCP2Q5VXM1 449 aa14.73□□□□□ -0.05
LYSMD3-202ENST00000453259 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.73□□□□□ -0.05
LYSMD3-202ENST00000453259 FRS2Q8WU20 508 aa14.73□□□□□ -0.05
LYSMD3-202ENST00000453259 TFAP2BQ92481 460 aa14.73□□□□□ -0.05
LYSMD3-202ENST00000453259 SLC35C1Q96A29 364 aa14.73□□□□□ -0.05
LYSMD3-202ENST00000453259 KLHDC7BQ96G42 594 aa14.73□□□□□ -0.05
LYSMD3-202ENST00000453259 NT5C1BQ96P26 610 aa14.73□□□□□ -0.05
LYSMD3-202ENST00000453259 KLHL11Q9NVR0 708 aa14.73□□□□□ -0.05
LYSMD3-202ENST00000453259 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.73□□□□□ -0.05
LYSMD3-202ENST00000453259 NCKIPSDQ9NZQ3 722 aa14.73□□□□□ -0.05
LYSMD3-202ENST00000453259 ARID1BQ8NFD5 2236 aaPredicted RBP14.72□□□□□ -0.05
LYSMD3-202ENST00000453259 NEMP2A6NFY4 417 aa14.72□□□□□ -0.05
LYSMD3-202ENST00000453259 MCF2LO15068 1137 aa14.72□□□□□ -0.05
LYSMD3-202ENST00000453259 P4HA2O15460 535 aa14.72□□□□□ -0.05
LYSMD3-202ENST00000453259 SIGLEC6O43699 453 aa14.72□□□□□ -0.05
LYSMD3-202ENST00000453259 ATP9BO43861 1147 aa14.72□□□□□ -0.05
LYSMD3-202ENST00000453259 TACR2P21452 398 aa14.72□□□□□ -0.05
LYSMD3-202ENST00000453259 LSSP48449 732 aa14.72□□□□□ -0.05
LYSMD3-202ENST00000453259 DUSP3P51452 185 aaPredicted RBP14.72□□□□□ -0.05
LYSMD3-202ENST00000453259 GCNT1Q02742 428 aa14.72□□□□□ -0.05
LYSMD3-202ENST00000453259 CCDC173Q0VFZ6 552 aa14.72□□□□□ -0.05
LYSMD3-202ENST00000453259 KCNH2Q12809 1159 aa14.72□□□□□ -0.05
LYSMD3-202ENST00000453259 TAF1BQ53T94 588 aaPredicted RBP14.72□□□□□ -0.05
LYSMD3-202ENST00000453259 AGBL4Q5VU57 503 aa14.72□□□□□ -0.05
LYSMD3-202ENST00000453259 MMS22LQ6ZRQ5 1243 aa14.72□□□□□ -0.05
LYSMD3-202ENST00000453259 CHSY1Q86X52 802 aa14.72□□□□□ -0.05
LYSMD3-202ENST00000453259 DCP2Q8IU60 420 aaKnown RBP14.72□□□□□ -0.05
LYSMD3-202ENST00000453259 HSCBQ8IWL3 235 aa14.72□□□□□ -0.05
LYSMD3-202ENST00000453259 APCDD1Q8J025 514 aa14.72□□□□□ -0.05
LYSMD3-202ENST00000453259 LGI2Q8N0V4 545 aa14.72□□□□□ -0.05
LYSMD3-202ENST00000453259 CFAP52Q8N1V2 620 aa14.72□□□□□ -0.05
LYSMD3-202ENST00000453259 ATP6V0D2Q8N8Y2 350 aa14.72□□□□□ -0.05
LYSMD3-202ENST00000453259 FAM181AQ8N9Y4 354 aa14.72□□□□□ -0.05
LYSMD3-202ENST00000453259 TMEM145Q8NBT3 493 aa14.72□□□□□ -0.05
LYSMD3-202ENST00000453259 FAM149B1Q96BN6 582 aa14.72□□□□□ -0.05
LYSMD3-202ENST00000453259 RPL10LQ96L21 214 aaKnown RBP14.72□□□□□ -0.05
LYSMD3-202ENST00000453259 CCDC114Q96M63 670 aa14.72□□□□□ -0.05
LYSMD3-202ENST00000453259 DUSP23Q9BVJ7 150 aa14.72□□□□□ -0.05
LYSMD3-202ENST00000453259 NLGN3Q9NZ94 848 aa14.72□□□□□ -0.05
LYSMD3-202ENST00000453259 SLC25A13Q9UJS0 675 aa14.72□□□□□ -0.05
LYSMD3-202ENST00000453259 PPM1HQ9ULR3 514 aa14.72□□□□□ -0.05
LYSMD3-202ENST00000453259 KCNU1A8MYU2 1149 aa14.71□□□□□ -0.05
LYSMD3-202ENST00000453259 TRIM38O00635 465 aa14.71□□□□□ -0.05
LYSMD3-202ENST00000453259 RTN2O75298 545 aa14.71□□□□□ -0.05
LYSMD3-202ENST00000453259 ZIC2O95409 532 aaPredicted RBP14.71□□□□□ -0.05
LYSMD3-202ENST00000453259 MOCS2O96007 188 aaPredicted RBP14.71□□□□□ -0.05
LYSMD3-202ENST00000453259 IGLV3-25P01717 112 aa14.71□□□□□ -0.05
LYSMD3-202ENST00000453259 DGKAP23743 735 aa14.71□□□□□ -0.05
LYSMD3-202ENST00000453259 FMO5P49326 533 aa14.71□□□□□ -0.05
LYSMD3-202ENST00000453259 SMYD5Q6GMV2 418 aa14.71□□□□□ -0.05
LYSMD3-202ENST00000453259 PCSK4Q6UW60 755 aa14.71□□□□□ -0.05
LYSMD3-202ENST00000453259 KDM7AQ6ZMT4 941 aa14.71□□□□□ -0.05
LYSMD3-202ENST00000453259 TAC4Q86UU9 113 aa14.71□□□□□ -0.05
LYSMD3-202ENST00000453259 ZSCAN30Q86W11 494 aa14.71□□□□□ -0.05
LYSMD3-202ENST00000453259 CCAR2Q8N163 923 aaKnown RBP14.71□□□□□ -0.05
LYSMD3-202ENST00000453259 SLC25A45Q8N413 288 aa14.71□□□□□ -0.05
LYSMD3-202ENST00000453259 CLEC4CQ8WTT0 213 aa14.71□□□□□ -0.05
LYSMD3-202ENST00000453259 MYEOVQ96EZ4 313 aa14.71□□□□□ -0.05
LYSMD3-202ENST00000453259 CCDC97Q96F63 343 aaPredicted RBP14.71□□□□□ -0.05
LYSMD3-202ENST00000453259 MED15Q96RN5 788 aa14.71□□□□□ -0.05
LYSMD3-202ENST00000453259 SCAND2PQ9GZW5 306 aaPredicted RBP14.71□□□□□ -0.05
LYSMD3-202ENST00000453259 POLR1BQ9H9Y6 1135 aa14.71□□□□□ -0.05
LYSMD3-202ENST00000453259 POPDC2Q9HBU9 364 aa14.71□□□□□ -0.05
LYSMD3-202ENST00000453259 THSD1Q9NS62 852 aa14.71□□□□□ -0.05
LYSMD3-202ENST00000453259 FARP1Q9Y4F1 1045 aaPredicted RBP14.71□□□□□ -0.05
LYSMD3-202ENST00000453259 PCDHB4Q9Y5E5 795 aa14.71□□□□□ -0.05
LYSMD3-202ENST00000453259 COL6A6A6NMZ7 2263 aa14.7□□□□□ -0.06
LYSMD3-202ENST00000453259 OPA1O60313 960 aa14.7□□□□□ -0.06
LYSMD3-202ENST00000453259 MLLT3P42568 568 aaPredicted RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms