RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 YKT6O15498 198 aa12.03□□□□□ -0.48
GARNL3-210ENST00000453030 BNIP3LO60238 219 aa12.03□□□□□ -0.48
GARNL3-210ENST00000453030 RTN2O75298 545 aa12.03□□□□□ -0.48
GARNL3-210ENST00000453030 GRAP2O75791 330 aa12.03□□□□□ -0.48
GARNL3-210ENST00000453030 JUPP14923 745 aa12.03□□□□□ -0.48
GARNL3-210ENST00000453030 USP8P40818 1118 aa12.03□□□□□ -0.48
GARNL3-210ENST00000453030 ACADVLP49748 655 aa12.03□□□□□ -0.48
GARNL3-210ENST00000453030 IRAK1P51617 712 aa12.03□□□□□ -0.48
GARNL3-210ENST00000453030 YWHAZP63104 245 aaKnown RBP12.03□□□□□ -0.48
GARNL3-210ENST00000453030 PAK1Q13153 545 aa12.03□□□□□ -0.48
GARNL3-210ENST00000453030 ARHGAP44Q17R89 818 aa12.03□□□□□ -0.48
GARNL3-210ENST00000453030 ACCSLQ4AC99 568 aa12.03□□□□□ -0.48
GARNL3-210ENST00000453030 SLC45A4Q5BKX6 768 aa12.03□□□□□ -0.48
GARNL3-210ENST00000453030 RABGAP1LQ5R372 815 aa12.03□□□□□ -0.48
GARNL3-210ENST00000453030 HES3Q5TGS1 186 aa12.03□□□□□ -0.48
GARNL3-210ENST00000453030 NAPEPLDQ6IQ20 393 aa12.03□□□□□ -0.48
GARNL3-210ENST00000453030 CXorf57Q6NSI4 855 aaKnown RBP12.03□□□□□ -0.48
GARNL3-210ENST00000453030 BEND5Q7L4P6 421 aa12.03□□□□□ -0.48
GARNL3-210ENST00000453030 TMPRSS12Q86WS5 348 aa12.03□□□□□ -0.48
GARNL3-210ENST00000453030 PIP4K2CQ8TBX8 421 aa12.03□□□□□ -0.48
GARNL3-210ENST00000453030 STK32AQ8WU08 396 aa12.03□□□□□ -0.48
GARNL3-210ENST00000453030 ZNF606Q8WXB4 792 aa12.03□□□□□ -0.48
GARNL3-210ENST00000453030 OR8D1Q8WZ84 308 aa12.03□□□□□ -0.48
GARNL3-210ENST00000453030 RPRD1AQ96P16 312 aaPredicted RBP12.03□□□□□ -0.48
GARNL3-210ENST00000453030 SPAG5Q96R06 1193 aa12.03□□□□□ -0.48
GARNL3-210ENST00000453030 MED15Q96RN5 788 aa12.03□□□□□ -0.48
GARNL3-210ENST00000453030 PRMT1Q99873 361 aaKnown RBP12.03□□□□□ -0.48
GARNL3-210ENST00000453030 CRACR2AQ9BSW2 395 aa12.03□□□□□ -0.48
GARNL3-210ENST00000453030 THAP9Q9H5L6 903 aa12.03□□□□□ -0.48
GARNL3-210ENST00000453030 SLC12A6Q9UHW9 1150 aa12.03□□□□□ -0.48
GARNL3-210ENST00000453030 SLC25A13Q9UJS0 675 aa12.03□□□□□ -0.48
GARNL3-210ENST00000453030 SARDHQ9UL12 918 aa12.03□□□□□ -0.48
GARNL3-210ENST00000453030 VANGL2Q9ULK5 521 aa12.03□□□□□ -0.48
GARNL3-210ENST00000453030 CNTN6Q9UQ52 1028 aa12.03□□□□□ -0.48
GARNL3-210ENST00000453030 PCDHGA1Q9Y5H4 931 aa12.03□□□□□ -0.48
GARNL3-210ENST00000453030 HELZ2Q9BYK8 2649 aaKnown RBP12.02□□□□□ -0.49
GARNL3-210ENST00000453030 C10orf142B7Z368 130 aa12.02□□□□□ -0.49
GARNL3-210ENST00000453030 LATO43561 262 aa12.02□□□□□ -0.49
GARNL3-210ENST00000453030 SDC3O75056 442 aa12.02□□□□□ -0.49
GARNL3-210ENST00000453030 GNA14O95837 355 aa12.02□□□□□ -0.49
GARNL3-210ENST00000453030 CCR1P32246 355 aa12.02□□□□□ -0.49
GARNL3-210ENST00000453030 ABCG1P45844 678 aa12.02□□□□□ -0.49
GARNL3-210ENST00000453030 CDK17Q00537 523 aa12.02□□□□□ -0.49
GARNL3-210ENST00000453030 APBA1Q02410 837 aa12.02□□□□□ -0.49
GARNL3-210ENST00000453030 SULT2A1Q06520 285 aa12.02□□□□□ -0.49
GARNL3-210ENST00000453030 BNIP3Q12983 259 aa12.02□□□□□ -0.49
GARNL3-210ENST00000453030 NME3Q13232 169 aa12.02□□□□□ -0.49
GARNL3-210ENST00000453030 SLC12A1Q13621 1099 aa12.02□□□□□ -0.49
GARNL3-210ENST00000453030 MEA1Q16626 185 aa12.02□□□□□ -0.49
GARNL3-210ENST00000453030 C6orf118Q5T5N4 469 aa12.02□□□□□ -0.49
GARNL3-210ENST00000453030 TTC39BQ5VTQ0 682 aaPredicted RBP12.02□□□□□ -0.49
GARNL3-210ENST00000453030 FBXL22Q6P050 247 aa12.02□□□□□ -0.49
GARNL3-210ENST00000453030 Q6ZVU0 165 aa12.02□□□□□ -0.49
GARNL3-210ENST00000453030 DSG4Q86SJ6 1040 aa12.02□□□□□ -0.49
GARNL3-210ENST00000453030 TMEM110Q86TL2 294 aa12.02□□□□□ -0.49
GARNL3-210ENST00000453030 PRPF39Q86UA1 669 aaKnown RBP12.02□□□□□ -0.49
GARNL3-210ENST00000453030 DEFB106AQ8N104 65 aa12.02□□□□□ -0.49
GARNL3-210ENST00000453030 OXR1Q8N573 874 aa12.02□□□□□ -0.49
GARNL3-210ENST00000453030 OR52K2Q8NGK3 314 aa12.02□□□□□ -0.49
GARNL3-210ENST00000453030 FRS2Q8WU20 508 aa12.02□□□□□ -0.49
GARNL3-210ENST00000453030 CPXM1Q96SM3 734 aa12.02□□□□□ -0.49
GARNL3-210ENST00000453030 MYOCQ99972 504 aa12.02□□□□□ -0.49
GARNL3-210ENST00000453030 SRRTQ9BXP5 876 aaKnown RBP12.02□□□□□ -0.49
GARNL3-210ENST00000453030 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.02□□□□□ -0.49
GARNL3-210ENST00000453030 CA5BQ9Y2D0 317 aa12.02□□□□□ -0.49
GARNL3-210ENST00000453030 MGAQ8IWI9 3026 aa12.02□□□□□ -0.49
GARNL3-210ENST00000453030 A0A087WV48 116 aa12.01□□□□□ -0.49
GARNL3-210ENST00000453030 EIF4E1BA6NMX2 242 aaKnown RBP12.01□□□□□ -0.49
GARNL3-210ENST00000453030 BECN2A8MW95 431 aa12.01□□□□□ -0.49
GARNL3-210ENST00000453030 C1QTNF3-AMACRE9PGA6 284 aa12.01□□□□□ -0.49
GARNL3-210ENST00000453030 PLRG1O43660 514 aaKnown RBP12.01□□□□□ -0.49
GARNL3-210ENST00000453030 SLC2A3P11169 496 aa12.01□□□□□ -0.49
GARNL3-210ENST00000453030 ZNF18P17022 549 aa12.01□□□□□ -0.49
GARNL3-210ENST00000453030 MARSP56192 900 aaKnown RBP12.01□□□□□ -0.49
GARNL3-210ENST00000453030 SEMG2Q02383 582 aa12.01□□□□□ -0.49
GARNL3-210ENST00000453030 CNTN1Q12860 1018 aa12.01□□□□□ -0.49
GARNL3-210ENST00000453030 EIF4EBP2Q13542 120 aaPredicted RBP12.01□□□□□ -0.49
GARNL3-210ENST00000453030 MORC3Q14149 939 aa12.01□□□□□ -0.49
GARNL3-210ENST00000453030 AGBL4Q5VU57 503 aa12.01□□□□□ -0.49
GARNL3-210ENST00000453030 SFMBT2Q5VUG0 894 aa12.01□□□□□ -0.49
GARNL3-210ENST00000453030 TRIM65Q6PJ69 517 aa12.01□□□□□ -0.49
GARNL3-210ENST00000453030 FOXR2Q6PJQ5 311 aa12.01□□□□□ -0.49
GARNL3-210ENST00000453030 FAM183BPQ6ZVS7 135 aa12.01□□□□□ -0.49
GARNL3-210ENST00000453030 SPATS2Q86XZ4 545 aaKnown RBP12.01□□□□□ -0.49
GARNL3-210ENST00000453030 CREBRFQ8IUR6 639 aa12.01□□□□□ -0.49
GARNL3-210ENST00000453030 C1orf131Q8NDD1 294 aaKnown RBP12.01□□□□□ -0.49
GARNL3-210ENST00000453030 SLC2A13Q96QE2 648 aa12.01□□□□□ -0.49
GARNL3-210ENST00000453030 ARHGAP20Q9P2F6 1191 aa12.01□□□□□ -0.49
GARNL3-210ENST00000453030 VPS28Q9UK41 221 aa12.01□□□□□ -0.49
GARNL3-210ENST00000453030 TPX2Q9ULW0 747 aaKnown RBP12.01□□□□□ -0.49
GARNL3-210ENST00000453030 AK5Q9Y6K8 562 aa12.01□□□□□ -0.49
GARNL3-210ENST00000453030 ATMQ13315 3056 aa12□□□□□ -0.49
GARNL3-210ENST00000453030 E9PAM4 449 aa12□□□□□ -0.49
GARNL3-210ENST00000453030 SLC7A4O43246 635 aa12□□□□□ -0.49
GARNL3-210ENST00000453030 TLX3O43711 291 aaPredicted RBP12□□□□□ -0.49
GARNL3-210ENST00000453030 HSF2BPO75031 334 aa12□□□□□ -0.49
GARNL3-210ENST00000453030 PRLRP16471 622 aa12□□□□□ -0.49
GARNL3-210ENST00000453030 OXCT1P55809 520 aa12□□□□□ -0.49
GARNL3-210ENST00000453030 TARDBPQ13148 414 aaKnown RBP eCLIP12□□□□□ -0.49
GARNL3-210ENST00000453030 AUHQ13825 339 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms