RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 SPERTQ8NA61 448 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 BBOF1Q8ND07 529 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 IFI44Q8TCB0 444 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 BCAS4Q8TDM0 211 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 ST7LQ8TDW4 575 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 HMGB4Q8WW32 186 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 RAPGEF5Q92565 580 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 THRSPQ92748 146 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 FOXRED1Q96CU9 486 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 CNOT6LQ96LI5 555 aaKnown RBP4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 GAL3ST4Q96RP7 486 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 ERP44Q9BS26 406 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 CCDC106Q9BWC9 280 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 LRRCC1Q9C099 1032 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 TAOK3Q9H2K8 898 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 MTG2Q9H4K7 406 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 STN1Q9H668 368 aaKnown RBP4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 SERINC1Q9NRX5 453 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 KCND2Q9NZV8 630 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 SUFUQ9UMX1 484 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 CNTN6Q9UQ52 1028 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 GDAQ9Y2T3 454 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 KCNK7Q9Y2U2 307 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 SNX9Q9Y5X1 595 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 V9GYY5 206 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 IL16Q14005 1332 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 ADGRF5Q8IZF2 1346 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 WDR19Q8NEZ3 1342 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 UNC13AQ9UPW8 1703 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 TEX51A0A1B0GUA7 166 aa4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 A0A1W2PQ27 194 aa4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 A0A1W2PQ64 194 aa4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 A0A1W2PQC6 194 aa4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 A0A1W2PQD8 194 aa4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 PRAMEF22A3QJZ6 481 aa4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 SMIM30A4D0T7 59 aa4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 FAM90A20PA6NIJ5 464 aa4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 C16orf96A6NNT2 1141 aa4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 GCOM1H8Y6P7 765 aaPredicted RBP4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 J3KTA2 159 aa4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 F2RL2O00254 374 aa4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 CA12O43570 354 aa4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 NRP2O60462 931 aa4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 NMT2O60551 498 aa4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 DAB1O75553 588 aa4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 SLITRK3O94933 977 aa4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 VIPP01282 170 aa4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 RB1P06400 928 aa4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 TPM3P06753 285 aa4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 CCDC172P0C7W6 258 aa4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 ACTN1P12814 892 aa4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 NCF1P14598 390 aaPredicted RBP4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 TPH1P17752 444 aa4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 CDH2P19022 906 aaPredicted RBP4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 CASTP20810 708 aaKnown RBP4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 CDH3P22223 829 aa4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 SFPQP23246 707 aaKnown RBP eCLIP4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 KDRP35968 1356 aa4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 GPD2P43304 727 aa4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 MAGEA10P43363 369 aaPredicted RBP4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 EPHB3P54753 998 aa4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 NME5P56597 212 aa4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 PER3P56645 1201 aa4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 NRG3P56975 720 aa4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 CORO7P57737 925 aa4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 STX1BP61266 288 aa4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 NOMO3P69849 1222 aa4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 CHIT1Q13231 466 aa4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 ALCAMQ13740 583 aa4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 GRM4Q14833 912 aa4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 C15orf59Q2T9L4 293 aaPredicted RBP4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 TWISTNBQ3B726 338 aaPredicted RBP4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 TRIM60Q495X7 471 aa4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 COLEC12Q5KU26 742 aa4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 RBM20Q5T481 1227 aaKnown RBP4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 PRAMEF18Q5VWM3 479 aa4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 AP1ARQ63HQ0 302 aa4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 TTC41PQ6P2S7 1318 aa4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 INTS8Q75QN2 995 aaKnown RBP4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 DSG4Q86SJ6 1040 aa4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 KLHL7Q8IXQ5 586 aa4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 RBM12BQ8IXT5 1001 aaKnown RBP4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 MYOCDQ8IZQ8 938 aa4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 FSIP1Q8NA03 581 aa4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 ATAD1Q8NBU5 361 aa4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 SUPT20HQ8NEM7 779 aa4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 SMARCC2Q8TAQ2 1214 aa4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 RABGGTAQ92696 567 aa4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 SMARCE1Q969G3 411 aa4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 NACC2Q96BF6 587 aa4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 TOX2Q96NM4 488 aa4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 DGAT2Q96PD7 388 aa4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 KCNK16Q96T55 309 aa4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 MGME1Q9BQP7 344 aa4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 MLPHQ9BV36 600 aaPredicted RBP4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 HEMGNQ9BXL5 484 aa4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 PUS3Q9BZE2 481 aaKnown RBP4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 UNKLQ9H9P5 680 aaKnown RBP4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 PLEKHA2Q9HB19 425 aa4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 SEMA4BQ9NPR2 832 aaPredicted RBP4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms