RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 APOL1O14791 398 aa11.87□□□□□ -0.51
SCN9A-204ENST00000452182 TIMM44O43615 452 aa11.87□□□□□ -0.51
SCN9A-204ENST00000452182 TJP3O95049 919 aa11.87□□□□□ -0.51
SCN9A-204ENST00000452182 KAT7O95251 611 aa11.87□□□□□ -0.51
SCN9A-204ENST00000452182 PABPC1P11940 636 aaKnown RBP11.87□□□□□ -0.51
SCN9A-204ENST00000452182 KRT10P13645 584 aa11.87□□□□□ -0.51
SCN9A-204ENST00000452182 TCP1P17987 556 aaKnown RBP11.87□□□□□ -0.51
SCN9A-204ENST00000452182 CD70P32970 193 aa11.87□□□□□ -0.51
SCN9A-204ENST00000452182 GRIA2P42262 883 aa11.87□□□□□ -0.51
SCN9A-204ENST00000452182 NR2C2P49116 596 aa11.87□□□□□ -0.51
SCN9A-204ENST00000452182 DNA2P51530 1060 aa11.87□□□□□ -0.51
SCN9A-204ENST00000452182 ZNF211Q13398 564 aaPredicted RBP11.87□□□□□ -0.51
SCN9A-204ENST00000452182 EIF4HQ15056 248 aaKnown RBP11.87□□□□□ -0.51
SCN9A-204ENST00000452182 PLEKHG6Q3KR16 790 aa11.87□□□□□ -0.51
SCN9A-204ENST00000452182 TMEM196Q5HYL7 178 aa11.87□□□□□ -0.51
SCN9A-204ENST00000452182 SEL1L2Q5TEA6 688 aa11.87□□□□□ -0.51
SCN9A-204ENST00000452182 TPRG1Q6ZUI0 275 aa11.87□□□□□ -0.51
SCN9A-204ENST00000452182 BBS12Q6ZW61 710 aa11.87□□□□□ -0.51
SCN9A-204ENST00000452182 RFX6Q8HWS3 928 aa11.87□□□□□ -0.51
SCN9A-204ENST00000452182 NPWQ8N729 165 aa11.87□□□□□ -0.51
SCN9A-204ENST00000452182 FBXL21Q9UKT6 434 aa11.87□□□□□ -0.51
SCN9A-204ENST00000452182 TRIM24O15164 1050 aa11.86□□□□□ -0.51
SCN9A-204ENST00000452182 FANCGO15287 622 aa11.86□□□□□ -0.51
SCN9A-204ENST00000452182 NCAM2O15394 837 aa11.86□□□□□ -0.51
SCN9A-204ENST00000452182 DCXO43602 365 aa11.86□□□□□ -0.51
SCN9A-204ENST00000452182 CST8O60676 142 aa11.86□□□□□ -0.51
SCN9A-204ENST00000452182 APODP05090 189 aa11.86□□□□□ -0.51
SCN9A-204ENST00000452182 DRD1P21728 446 aa11.86□□□□□ -0.51
SCN9A-204ENST00000452182 TGM2P21980 687 aa11.86□□□□□ -0.51
SCN9A-204ENST00000452182 CSKP41240 450 aa11.86□□□□□ -0.51
SCN9A-204ENST00000452182 TNFRSF4P43489 277 aa11.86□□□□□ -0.51
SCN9A-204ENST00000452182 ADCY2Q08462 1091 aa11.86□□□□□ -0.51
SCN9A-204ENST00000452182 KLF1Q13351 362 aaPredicted RBP11.86□□□□□ -0.51
SCN9A-204ENST00000452182 POLD3Q15054 466 aaPredicted RBP11.86□□□□□ -0.51
SCN9A-204ENST00000452182 GEN1Q17RS7 908 aa11.86□□□□□ -0.51
SCN9A-204ENST00000452182 RNF219Q5W0B1 726 aaPredicted RBP11.86□□□□□ -0.51
SCN9A-204ENST00000452182 AADACL2Q6P093 401 aa11.86□□□□□ -0.51
SCN9A-204ENST00000452182 ZNF852Q6ZMS4 543 aa11.86□□□□□ -0.51
SCN9A-204ENST00000452182 BZW1Q7L1Q6 419 aaKnown RBP11.86□□□□□ -0.51
SCN9A-204ENST00000452182 ADIPOR2Q86V24 386 aa11.86□□□□□ -0.51
SCN9A-204ENST00000452182 LRRC49Q8IUZ0 686 aa11.86□□□□□ -0.51
SCN9A-204ENST00000452182 ARHGAP12Q8IWW6 846 aa11.86□□□□□ -0.51
SCN9A-204ENST00000452182 RASGEF1CQ8N431 466 aa11.86□□□□□ -0.51
SCN9A-204ENST00000452182 FAM3CQ92520 227 aa11.86□□□□□ -0.51
SCN9A-204ENST00000452182 EDAQ92838 391 aa11.86□□□□□ -0.51
SCN9A-204ENST00000452182 ARHGEF2Q92974 986 aaKnown RBP11.86□□□□□ -0.51
SCN9A-204ENST00000452182 ACDQ96AP0 544 aa11.86□□□□□ -0.51
SCN9A-204ENST00000452182 C16orf45Q96MC5 204 aaPredicted RBP11.86□□□□□ -0.51
SCN9A-204ENST00000452182 OSBPL9Q96SU4 736 aa11.86□□□□□ -0.51
SCN9A-204ENST00000452182 ACE2Q9BYF1 805 aaPredicted RBP11.86□□□□□ -0.51
SCN9A-204ENST00000452182 SLC39A8Q9C0K1 460 aa11.86□□□□□ -0.51
SCN9A-204ENST00000452182 MUC3BQ9H195 1237 aa11.86□□□□□ -0.51
SCN9A-204ENST00000452182 FBRSL1Q9HCM7 1045 aaKnown RBP11.86□□□□□ -0.51
SCN9A-204ENST00000452182 INTS6Q9UL03 887 aaKnown RBP11.86□□□□□ -0.51
SCN9A-204ENST00000452182 TTC7AQ9ULT0 858 aaPredicted RBP11.86□□□□□ -0.51
SCN9A-204ENST00000452182 STARD13Q9Y3M8 1113 aa11.86□□□□□ -0.51
SCN9A-204ENST00000452182 MUC3AQ02505 3323 aa11.86□□□□□ -0.51
SCN9A-204ENST00000452182 NUP205Q92621 2012 aa11.86□□□□□ -0.51
SCN9A-204ENST00000452182 A0A0D9SEW6 157 aa11.86□□□□□ -0.51
SCN9A-204ENST00000452182 KRBA1A5PL33 1030 aa11.86□□□□□ -0.51
SCN9A-204ENST00000452182 ARHGAP42A6NI28 874 aa11.86□□□□□ -0.51
SCN9A-204ENST00000452182 RASA4BC9J798 803 aa11.86□□□□□ -0.51
SCN9A-204ENST00000452182 RASA4O43374 803 aa11.86□□□□□ -0.51
SCN9A-204ENST00000452182 ALADP13716 330 aa11.86□□□□□ -0.51
SCN9A-204ENST00000452182 MX2P20592 715 aa11.86□□□□□ -0.51
SCN9A-204ENST00000452182 MZF1P28698 734 aaPredicted RBP11.86□□□□□ -0.51
SCN9A-204ENST00000452182 SULT2A1Q06520 285 aa11.86□□□□□ -0.51
SCN9A-204ENST00000452182 SIGLEC14Q08ET2 396 aa11.86□□□□□ -0.51
SCN9A-204ENST00000452182 MESP2Q0VG99 397 aa11.86□□□□□ -0.51
SCN9A-204ENST00000452182 GRSF1Q12849 480 aaKnown RBP eCLIP11.86□□□□□ -0.51
SCN9A-204ENST00000452182 SERINC3Q13530 473 aa11.86□□□□□ -0.51
SCN9A-204ENST00000452182 E2F5Q15329 346 aa11.86□□□□□ -0.51
SCN9A-204ENST00000452182 FUT11Q495W5 492 aa11.86□□□□□ -0.51
SCN9A-204ENST00000452182 FBXO43Q4G163 708 aa11.86□□□□□ -0.51
SCN9A-204ENST00000452182 PITRM1Q5JRX3 1037 aa11.86□□□□□ -0.51
SCN9A-204ENST00000452182 KAZNQ674X7 775 aa11.86□□□□□ -0.51
SCN9A-204ENST00000452182 NAIF1Q69YI7 327 aaPredicted RBP11.86□□□□□ -0.51
SCN9A-204ENST00000452182 SYT10Q6XYQ8 523 aa11.86□□□□□ -0.51
SCN9A-204ENST00000452182 SLC13A5Q86YT5 568 aaPredicted RBP11.86□□□□□ -0.51
SCN9A-204ENST00000452182 ZNF687Q8N1G0 1237 aa11.86□□□□□ -0.51
SCN9A-204ENST00000452182 DCAF4L2Q8NA75 395 aa11.86□□□□□ -0.51
SCN9A-204ENST00000452182 CCDC26Q8TAB7 109 aa11.86□□□□□ -0.51
SCN9A-204ENST00000452182 PTCD2Q8WV60 388 aaKnown RBP11.86□□□□□ -0.51
SCN9A-204ENST00000452182 TTC17Q96AE7 1141 aa11.86□□□□□ -0.51
SCN9A-204ENST00000452182 NELL2Q99435 816 aa11.86□□□□□ -0.51
SCN9A-204ENST00000452182 PSMB7Q99436 277 aa11.86□□□□□ -0.51
SCN9A-204ENST00000452182 HERPUD2Q9BSE4 406 aa11.86□□□□□ -0.51
SCN9A-204ENST00000452182 C2orf49Q9BVC5 232 aaPredicted RBP11.86□□□□□ -0.51
SCN9A-204ENST00000452182 HEMGNQ9BXL5 484 aa11.86□□□□□ -0.51
SCN9A-204ENST00000452182 DTLQ9NZJ0 730 aa11.86□□□□□ -0.51
SCN9A-204ENST00000452182 VPS28Q9UK41 221 aa11.86□□□□□ -0.51
SCN9A-204ENST00000452182 CA14Q9ULX7 337 aa11.86□□□□□ -0.51
SCN9A-204ENST00000452182 MRPS17Q9Y2R5 130 aaKnown RBP11.86□□□□□ -0.51
SCN9A-204ENST00000452182 MFHAS1Q9Y4C4 1052 aa11.86□□□□□ -0.51
SCN9A-204ENST00000452182 SAR1BQ9Y6B6 198 aa11.86□□□□□ -0.51
SCN9A-204ENST00000452182 NYNRINQ9P2P1 1898 aaKnown RBP11.85□□□□□ -0.51
SCN9A-204ENST00000452182 TBC1D3BA6NDS4 549 aa11.85□□□□□ -0.51
SCN9A-204ENST00000452182 PRRT4C9JH25 899 aa11.85□□□□□ -0.51
SCN9A-204ENST00000452182 APOC4-APOC2K7ER74 178 aa11.85□□□□□ -0.51
SCN9A-204ENST00000452182 MFSD11O43934 449 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms