RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 ARCQ7LC44 396 aa12.83□□□□□ -0.36
CPSF4-208ENST00000452047 APTXQ7Z2E3 356 aaKnown RBP12.83□□□□□ -0.36
CPSF4-208ENST00000452047 MSANTD4Q8NCY6 345 aa12.83□□□□□ -0.36
CPSF4-208ENST00000452047 CAMK1GQ96NX5 476 aa12.83□□□□□ -0.36
CPSF4-208ENST00000452047 SIK2Q9H0K1 926 aa12.83□□□□□ -0.36
CPSF4-208ENST00000452047 NEUROG2Q9H2A3 272 aa12.83□□□□□ -0.36
CPSF4-208ENST00000452047 HSD3B7Q9H2F3 369 aa12.83□□□□□ -0.36
CPSF4-208ENST00000452047 IL21RQ9HBE5 538 aa12.83□□□□□ -0.36
CPSF4-208ENST00000452047 TM9SF3Q9HD45 589 aa12.83□□□□□ -0.36
CPSF4-208ENST00000452047 NLRC4Q9NPP4 1024 aa12.83□□□□□ -0.36
CPSF4-208ENST00000452047 TMPRSS4Q9NRS4 437 aa12.83□□□□□ -0.36
CPSF4-208ENST00000452047 LIMA1Q9UHB6 759 aaKnown RBP12.83□□□□□ -0.36
CPSF4-208ENST00000452047 NCKAP1Q9Y2A7 1128 aa12.83□□□□□ -0.36
CPSF4-208ENST00000452047 FNDC3AQ9Y2H6 1198 aaKnown RBP12.83□□□□□ -0.36
CPSF4-208ENST00000452047 PAXBP1Q9Y5B6 917 aa12.83□□□□□ -0.36
CPSF4-208ENST00000452047 SNX10Q9Y5X0 201 aa12.83□□□□□ -0.36
CPSF4-208ENST00000452047 IGF2RP11717 2491 aa12.83□□□□□ -0.36
CPSF4-208ENST00000452047 IGLV3-10A0A075B6K4 115 aa12.82□□□□□ -0.36
CPSF4-208ENST00000452047 A0A1B0GVT2 93 aa12.82□□□□□ -0.36
CPSF4-208ENST00000452047 DRGXA6NNA5 263 aa12.82□□□□□ -0.36
CPSF4-208ENST00000452047 GOLGA6L22H0YM25 854 aa12.82□□□□□ -0.36
CPSF4-208ENST00000452047 SH3BP5O60239 455 aa12.82□□□□□ -0.36
CPSF4-208ENST00000452047 RNASEH2AO75792 299 aaKnown RBP12.82□□□□□ -0.36
CPSF4-208ENST00000452047 FSBPO95073 299 aa12.82□□□□□ -0.36
CPSF4-208ENST00000452047 CER1O95813 267 aa12.82□□□□□ -0.36
CPSF4-208ENST00000452047 TOP3BO95985 862 aaKnown RBP12.82□□□□□ -0.36
CPSF4-208ENST00000452047 ADH1BP00325 375 aa12.82□□□□□ -0.36
CPSF4-208ENST00000452047 TPM2P07951 284 aa12.82□□□□□ -0.36
CPSF4-208ENST00000452047 ZNF883P0CG24 379 aa12.82□□□□□ -0.36
CPSF4-208ENST00000452047 C5AR1P21730 350 aa12.82□□□□□ -0.36
CPSF4-208ENST00000452047 MMP8P22894 467 aa12.82□□□□□ -0.36
CPSF4-208ENST00000452047 DRD3P35462 400 aa12.82□□□□□ -0.36
CPSF4-208ENST00000452047 NNMTP40261 264 aa12.82□□□□□ -0.36
CPSF4-208ENST00000452047 GRIA4P48058 902 aa12.82□□□□□ -0.36
CPSF4-208ENST00000452047 PSMD8P48556 350 aa12.82□□□□□ -0.36
CPSF4-208ENST00000452047 CSNK1EP49674 416 aaKnown RBP12.82□□□□□ -0.36
CPSF4-208ENST00000452047 GALCP54803 685 aa12.82□□□□□ -0.36
CPSF4-208ENST00000452047 ADPRHP54922 357 aa12.82□□□□□ -0.36
CPSF4-208ENST00000452047 SIM1P81133 766 aaPredicted RBP12.82□□□□□ -0.36
CPSF4-208ENST00000452047 NCAPHQ15003 741 aa12.82□□□□□ -0.36
CPSF4-208ENST00000452047 SYCP1Q15431 976 aa12.82□□□□□ -0.36
CPSF4-208ENST00000452047 HLA-BQ31612 363 aa12.82□□□□□ -0.36
CPSF4-208ENST00000452047 KIAA0895LQ68EN5 471 aa12.82□□□□□ -0.36
CPSF4-208ENST00000452047 NCEH1Q6PIU2 408 aa12.82□□□□□ -0.36
CPSF4-208ENST00000452047 IL27RAQ6UWB1 636 aa12.82□□□□□ -0.36
CPSF4-208ENST00000452047 LAYNQ6UX15 382 aa12.82□□□□□ -0.36
CPSF4-208ENST00000452047 SND1Q7KZF4 910 aaKnown RBP eCLIP12.82□□□□□ -0.36
CPSF4-208ENST00000452047 NAXDQ8IW45 347 aa12.82□□□□□ -0.36
CPSF4-208ENST00000452047 GANCQ8TET4 914 aa12.82□□□□□ -0.36
CPSF4-208ENST00000452047 FAM131CQ96AQ9 280 aa12.82□□□□□ -0.36
CPSF4-208ENST00000452047 C1orf74Q96LT6 269 aa12.82□□□□□ -0.36
CPSF4-208ENST00000452047 CFAP57Q96MR6 1250 aa12.82□□□□□ -0.36
CPSF4-208ENST00000452047 SPAG5Q96R06 1193 aa12.82□□□□□ -0.36
CPSF4-208ENST00000452047 PPP1R9BQ96SB3 815 aa12.82□□□□□ -0.36
CPSF4-208ENST00000452047 PSMB7Q99436 277 aa12.82□□□□□ -0.36
CPSF4-208ENST00000452047 GAREM1Q9H706 876 aa12.82□□□□□ -0.36
CPSF4-208ENST00000452047 METTL5Q9NRN9 209 aaKnown RBP12.82□□□□□ -0.36
CPSF4-208ENST00000452047 TMEM51Q9NW97 253 aa12.82□□□□□ -0.36
CPSF4-208ENST00000452047 ZNF212Q9UDV6 495 aa12.82□□□□□ -0.36
CPSF4-208ENST00000452047 VPS28Q9UK41 221 aa12.82□□□□□ -0.36
CPSF4-208ENST00000452047 HS3ST2Q9Y278 367 aa12.82□□□□□ -0.36
CPSF4-208ENST00000452047 CHD5Q8TDI0 1954 aa12.81□□□□□ -0.36
CPSF4-208ENST00000452047 CABIN1Q9Y6J0 2220 aa12.81□□□□□ -0.36
CPSF4-208ENST00000452047 LRRC10BA6NIK2 292 aa12.81□□□□□ -0.36
CPSF4-208ENST00000452047 CBFA2T3O75081 653 aa12.81□□□□□ -0.36
CPSF4-208ENST00000452047 ENDOD1O94919 500 aa12.81□□□□□ -0.36
CPSF4-208ENST00000452047 MBD3O95983 291 aa12.81□□□□□ -0.36
CPSF4-208ENST00000452047 IL1BP01584 269 aa12.81□□□□□ -0.36
CPSF4-208ENST00000452047 GOT1P17174 413 aa12.81□□□□□ -0.36
CPSF4-208ENST00000452047 SPINK2P20155 84 aa12.81□□□□□ -0.36
CPSF4-208ENST00000452047 RDXP35241 583 aaKnown RBP12.81□□□□□ -0.36
CPSF4-208ENST00000452047 METAP1P53582 386 aa12.81□□□□□ -0.36
CPSF4-208ENST00000452047 SFSWAPQ12872 951 aaKnown RBP12.81□□□□□ -0.36
CPSF4-208ENST00000452047 HNRNPDQ14103 355 aaKnown RBP12.81□□□□□ -0.36
CPSF4-208ENST00000452047 KIF19Q2TAC6 998 aa12.81□□□□□ -0.36
CPSF4-208ENST00000452047 CCDC183Q5T5S1 534 aa12.81□□□□□ -0.36
CPSF4-208ENST00000452047 ACBD5Q5T8D3 534 aaPredicted RBP12.81□□□□□ -0.36
CPSF4-208ENST00000452047 SH2D3CQ8N5H7 860 aa12.81□□□□□ -0.36
CPSF4-208ENST00000452047 EMC1Q8N766 993 aa12.81□□□□□ -0.36
CPSF4-208ENST00000452047 OR2T34Q8NGX1 318 aa12.81□□□□□ -0.36
CPSF4-208ENST00000452047 ERGIC2Q96RQ1 377 aa12.81□□□□□ -0.36
CPSF4-208ENST00000452047 HAPLN3Q96S86 360 aa12.81□□□□□ -0.36
CPSF4-208ENST00000452047 OMDQ99983 421 aa12.81□□□□□ -0.36
CPSF4-208ENST00000452047 TMEM121BQ9BXQ6 578 aaPredicted RBP12.81□□□□□ -0.36
CPSF4-208ENST00000452047 MUC3BQ9H195 1237 aa12.81□□□□□ -0.36
CPSF4-208ENST00000452047 EBF2Q9HAK2 575 aa12.81□□□□□ -0.36
CPSF4-208ENST00000452047 TM7SF3Q9NS93 570 aa12.81□□□□□ -0.36
CPSF4-208ENST00000452047 MPP6Q9NZW5 540 aa12.81□□□□□ -0.36
CPSF4-208ENST00000452047 SLC25A13Q9UJS0 675 aa12.81□□□□□ -0.36
CPSF4-208ENST00000452047 SARDHQ9UL12 918 aa12.81□□□□□ -0.36
CPSF4-208ENST00000452047 ANKRD6Q9Y2G4 727 aa12.81□□□□□ -0.36
CPSF4-208ENST00000452047 SNX11Q9Y5W9 270 aa12.81□□□□□ -0.36
CPSF4-208ENST00000452047 A0A1W2PPC4 97 aa12.8□□□□□ -0.36
CPSF4-208ENST00000452047 FAM47DPA6NHR8 397 aa12.8□□□□□ -0.36
CPSF4-208ENST00000452047 LRRC72A6NJI9 287 aa12.8□□□□□ -0.36
CPSF4-208ENST00000452047 E9PAM4 449 aa12.8□□□□□ -0.36
CPSF4-208ENST00000452047 MT-CO1P00395 513 aa12.8□□□□□ -0.36
CPSF4-208ENST00000452047 RHOCP08134 193 aa12.8□□□□□ -0.36
CPSF4-208ENST00000452047 SRCP12931 536 aa12.8□□□□□ -0.36
CPSF4-208ENST00000452047 UNGP13051 313 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms