RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 DUSP16Q9BY84 665 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 CRTAC1Q9NQ79 661 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 SPTLC3Q9NUV7 552 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 NFU1Q9UMS0 254 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 NUMBLQ9Y6R0 609 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 ACACAQ13085 2346 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 CLASP2O75122 1294 aaKnown RBP5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 KRT31Q15323 416 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 CCNG2Q16589 344 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 NAPEPLDQ6IQ20 393 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 PAOXQ6QHF9 649 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 SETD3Q86TU7 594 aaPredicted RBP5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 CLEC1AQ8NC01 280 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 TRIM58Q8NG06 486 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 PLD4Q96BZ4 506 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 RADILQ96JH8 1075 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 RHBGQ9H310 441 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 GAREM1Q9H706 876 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 WDR41Q9HAD4 459 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 CABIN1Q9Y6J0 2220 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 MTMR11A4FU01 709 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 A8MUI8 341 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 HAS3O00219 553 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 GCATO75600 419 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 KAT7O95251 611 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 TRIM16O95361 564 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 ERCC1P07992 297 aaPredicted RBP5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 ITGA3P26006 1051 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 VIPR2P41587 438 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 NCKAP1LP55160 1127 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 CAPRIN1Q14444 709 aaKnown RBP5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 C16orf72Q14CZ0 275 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 FAM187BQ17R55 369 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 TTLL9Q3SXZ7 439 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 MIIPQ5JXC2 388 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 FRS2Q8WU20 508 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 RMDN2Q96LZ7 410 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 DNAI1Q9UI46 699 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 DOCK3Q8IZD9 2030 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 TTC28Q96AY4 2481 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 SOAT2O75908 522 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 ELFN1P0C7U0 828 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 PABPC1P11940 636 aaKnown RBP5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 BRAFP15056 766 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 KCNE1P15382 129 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 TCN2P20062 427 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 MZF1P28698 734 aaPredicted RBP5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 RGS4P49798 205 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 CCT8P50990 548 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 NTHL1P78549 312 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 PPARDQ03181 441 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 DPCR1Q3MIW9 517 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 TTC39BQ5VTQ0 682 aaPredicted RBP5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 FAM172AQ8WUF8 416 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 CALR3Q96L12 384 aaKnown RBP5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 PSMB7Q99436 277 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 STMN4Q9H169 189 aaPredicted RBP5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 CBX8Q9HC52 389 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 KBTBD4Q9NVX7 518 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 FHOD1Q9Y613 1164 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 LGALS16A8MUM7 142 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 ISM1B1AKI9 464 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 KERAO60938 352 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 ANXA9O76027 345 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 ALPIP09923 528 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 SRFP11831 508 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 CLK3P49761 638 aaKnown RBP5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 CDK7P50613 346 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 RAP1GDS1P52306 607 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 DMC1Q14565 340 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 CNGA2Q16280 664 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 P3H1Q32P28 736 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 SLC10A6Q3KNW5 377 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 MMAAQ8IVH4 418 aaKnown RBP5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 UBLCP1Q8WVY7 318 aaPredicted RBP5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 WNT8BQ93098 351 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 WNT8AQ9H1J5 351 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 L1RE1Q9UN81 338 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 CREBBPQ92793 2442 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 MYH3P11055 1940 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 A0A1W2PQH9 124 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 C1RP00736 705 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 SNRPB2P08579 225 aaKnown RBP5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 ITGB8P26012 769 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 GTF2E2P29084 291 aaKnown RBP5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 OTX2P32243 289 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 DUSP6Q16828 381 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 CFAP221Q4G0U5 840 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 AARS2Q5JTZ9 985 aaKnown RBP5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 BTN2A3PQ96KV6 586 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 COL25A1Q9BXS0 654 aaPredicted RBP5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 BRINP2Q9C0B6 783 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 GRPEL1Q9HAV7 217 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 FNIP2Q9P278 1114 aa5.75□□□□□ -1.49
CDC42BPA-209ENST00000448940 LRRC14BA6NHZ5 514 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 MIF4GDA9UHW6 222 aaKnown RBP5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 CLDN5O00501 218 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 NPC1O15118 1278 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 HS6ST1O60243 411 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 SPATA31C1P0DKV0 1188 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms