RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 A0A0D9SEW6 157 aa13.08□□□□□ -0.32
PRPF40A-203ENST00000448428 LNP1A1A4G5 178 aa13.08□□□□□ -0.32
PRPF40A-203ENST00000448428 DCDC2BA2VCK2 349 aa13.08□□□□□ -0.32
PRPF40A-203ENST00000448428 ANKRD62A6NC57 917 aa13.08□□□□□ -0.32
PRPF40A-203ENST00000448428 FAM72CH0Y354 149 aa13.08□□□□□ -0.32
PRPF40A-203ENST00000448428 CCP110O43303 1012 aa13.08□□□□□ -0.32
PRPF40A-203ENST00000448428 RTN2O75298 545 aa13.08□□□□□ -0.32
PRPF40A-203ENST00000448428 FTLP02792 175 aaPredicted RBP13.08□□□□□ -0.32
PRPF40A-203ENST00000448428 DNTTP04053 509 aa13.08□□□□□ -0.32
PRPF40A-203ENST00000448428 RHOCP08134 193 aa13.08□□□□□ -0.32
PRPF40A-203ENST00000448428 VAV1P15498 845 aa13.08□□□□□ -0.32
PRPF40A-203ENST00000448428 MAOBP27338 520 aa13.08□□□□□ -0.32
PRPF40A-203ENST00000448428 OR1E1P30953 314 aa13.08□□□□□ -0.32
PRPF40A-203ENST00000448428 ACSL1P33121 698 aa13.08□□□□□ -0.32
PRPF40A-203ENST00000448428 DPP6P42658 865 aa13.08□□□□□ -0.32
PRPF40A-203ENST00000448428 VASPP50552 380 aaPredicted RBP13.08□□□□□ -0.32
PRPF40A-203ENST00000448428 LIMK1P53667 647 aa13.08□□□□□ -0.32
PRPF40A-203ENST00000448428 OGDHQ02218 1023 aa13.08□□□□□ -0.32
PRPF40A-203ENST00000448428 NRG1Q02297 640 aaPredicted RBP13.08□□□□□ -0.32
PRPF40A-203ENST00000448428 MAMLD1Q13495 774 aa13.08□□□□□ -0.32
PRPF40A-203ENST00000448428 TRIM61Q5EBN2 209 aa13.08□□□□□ -0.32
PRPF40A-203ENST00000448428 STPG1Q5TH74 334 aa13.08□□□□□ -0.32
PRPF40A-203ENST00000448428 FAM72AQ5TYM5 149 aa13.08□□□□□ -0.32
PRPF40A-203ENST00000448428 MANEALQ5VSG8 457 aa13.08□□□□□ -0.32
PRPF40A-203ENST00000448428 PEAR1Q5VY43 1037 aaPredicted RBP13.08□□□□□ -0.32
PRPF40A-203ENST00000448428 HGSNATQ68CP4 663 aa13.08□□□□□ -0.32
PRPF40A-203ENST00000448428 PLEKHA7Q6IQ23 1121 aa13.08□□□□□ -0.32
PRPF40A-203ENST00000448428 FAM72DQ6L9T8 149 aa13.08□□□□□ -0.32
PRPF40A-203ENST00000448428 PPP1R2P3Q6NXS1 205 aa13.08□□□□□ -0.32
PRPF40A-203ENST00000448428 DCUN1D2Q6PH85 259 aa13.08□□□□□ -0.32
PRPF40A-203ENST00000448428 FAM72BQ86X60 149 aa13.08□□□□□ -0.32
PRPF40A-203ENST00000448428 STK40Q8N2I9 435 aa13.08□□□□□ -0.32
PRPF40A-203ENST00000448428 CADM4Q8NFZ8 388 aa13.08□□□□□ -0.32
PRPF40A-203ENST00000448428 FRS2Q8WU20 508 aa13.08□□□□□ -0.32
PRPF40A-203ENST00000448428 SYN2Q92777 582 aaPredicted RBP13.08□□□□□ -0.32
PRPF40A-203ENST00000448428 RTKNQ9BST9 563 aa13.08□□□□□ -0.32
PRPF40A-203ENST00000448428 XPO4Q9C0E2 1151 aaKnown RBP13.08□□□□□ -0.32
PRPF40A-203ENST00000448428 TSPY26PQ9H489 355 aa13.08□□□□□ -0.32
PRPF40A-203ENST00000448428 PARVAQ9NVD7 372 aa13.08□□□□□ -0.32
PRPF40A-203ENST00000448428 PPARGC1AQ9UBK2 798 aaKnown RBP13.08□□□□□ -0.32
PRPF40A-203ENST00000448428 EVLQ9UI08 416 aaPredicted RBP13.08□□□□□ -0.32
PRPF40A-203ENST00000448428 SLC25A13Q9UJS0 675 aa13.08□□□□□ -0.32
PRPF40A-203ENST00000448428 CAPN11Q9UMQ6 739 aa13.08□□□□□ -0.32
PRPF40A-203ENST00000448428 SPTBN4Q9H254 2564 aa13.08□□□□□ -0.32
PRPF40A-203ENST00000448428 CHD5Q8TDI0 1954 aa13.07□□□□□ -0.32
PRPF40A-203ENST00000448428 ILVBLA1L0T0 632 aa13.07□□□□□ -0.32
PRPF40A-203ENST00000448428 METTL12A8MUP2 240 aa13.07□□□□□ -0.32
PRPF40A-203ENST00000448428 TM4SF5O14894 197 aa13.07□□□□□ -0.32
PRPF40A-203ENST00000448428 ATMINO43313 823 aaPredicted RBP13.07□□□□□ -0.32
PRPF40A-203ENST00000448428 ATP9BO43861 1147 aa13.07□□□□□ -0.32
PRPF40A-203ENST00000448428 SNAP91O60641 907 aa13.07□□□□□ -0.32
PRPF40A-203ENST00000448428 RNASEH1O60930 286 aaKnown RBP13.07□□□□□ -0.32
PRPF40A-203ENST00000448428 MT-CO1P00395 513 aa13.07□□□□□ -0.32
PRPF40A-203ENST00000448428 PLEKP08567 350 aaPredicted RBP13.07□□□□□ -0.32
PRPF40A-203ENST00000448428 SLC8A1P32418 973 aa13.07□□□□□ -0.32
PRPF40A-203ENST00000448428 HOXD12P35452 270 aa13.07□□□□□ -0.32
PRPF40A-203ENST00000448428 KRT83P78385 493 aa13.07□□□□□ -0.32
PRPF40A-203ENST00000448428 ZBED6P86452 979 aa13.07□□□□□ -0.32
PRPF40A-203ENST00000448428 NFKBIBQ15653 356 aa13.07□□□□□ -0.32
PRPF40A-203ENST00000448428 DLG2Q15700 870 aa13.07□□□□□ -0.32
PRPF40A-203ENST00000448428 DUOXA1Q1HG43 343 aa13.07□□□□□ -0.32
PRPF40A-203ENST00000448428 ACCSLQ4AC99 568 aa13.07□□□□□ -0.32
PRPF40A-203ENST00000448428 SYCP2LQ5T4T6 812 aa13.07□□□□□ -0.32
PRPF40A-203ENST00000448428 C6orf118Q5T5N4 469 aa13.07□□□□□ -0.32
PRPF40A-203ENST00000448428 SCYL2Q6P3W7 929 aa13.07□□□□□ -0.32
PRPF40A-203ENST00000448428 SLC23A3Q6PIS1 610 aa13.07□□□□□ -0.32
PRPF40A-203ENST00000448428 LRSAM1Q6UWE0 723 aa13.07□□□□□ -0.32
PRPF40A-203ENST00000448428 DGLUCYQ7Z3D6 616 aa13.07□□□□□ -0.32
PRPF40A-203ENST00000448428 SLFN11Q7Z7L1 901 aa13.07□□□□□ -0.32
PRPF40A-203ENST00000448428 MMAAQ8IVH4 418 aaKnown RBP13.07□□□□□ -0.32
PRPF40A-203ENST00000448428 RGL4Q8IZJ4 473 aa13.07□□□□□ -0.32
PRPF40A-203ENST00000448428 SH2D3CQ8N5H7 860 aa13.07□□□□□ -0.32
PRPF40A-203ENST00000448428 OR7D4Q8NG98 312 aa13.07□□□□□ -0.32
PRPF40A-203ENST00000448428 DNASE2BQ8WZ79 361 aa13.07□□□□□ -0.32
PRPF40A-203ENST00000448428 FOXJ1Q92949 421 aa13.07□□□□□ -0.32
PRPF40A-203ENST00000448428 NTAN1Q96AB6 310 aa13.07□□□□□ -0.32
PRPF40A-203ENST00000448428 CNPY3Q9BT09 278 aa13.07□□□□□ -0.32
PRPF40A-203ENST00000448428 EDEM2Q9BV94 578 aa13.07□□□□□ -0.32
PRPF40A-203ENST00000448428 PABPC3Q9H361 631 aaKnown RBP13.07□□□□□ -0.32
PRPF40A-203ENST00000448428 BZW2Q9Y6E2 419 aaKnown RBP13.07□□□□□ -0.32
PRPF40A-203ENST00000448428 DCHS1Q96JQ0 3298 aa13.07□□□□□ -0.32
PRPF40A-203ENST00000448428 CEP250Q9BV73 2442 aa13.06□□□□□ -0.32
PRPF40A-203ENST00000448428 K7ERQ8 282 aa13.06□□□□□ -0.32
PRPF40A-203ENST00000448428 CDX4O14627 284 aaPredicted RBP13.06□□□□□ -0.32
PRPF40A-203ENST00000448428 MID1O15344 667 aa13.06□□□□□ -0.32
PRPF40A-203ENST00000448428 LRIG2O94898 1065 aa13.06□□□□□ -0.32
PRPF40A-203ENST00000448428 GYPCP04921 128 aa13.06□□□□□ -0.32
PRPF40A-203ENST00000448428 CFIP05156 583 aa13.06□□□□□ -0.32
PRPF40A-203ENST00000448428 SRCP12931 536 aa13.06□□□□□ -0.32
PRPF40A-203ENST00000448428 GLDCP23378 1020 aa13.06□□□□□ -0.32
PRPF40A-203ENST00000448428 SCAPQ12770 1279 aa13.06□□□□□ -0.32
PRPF40A-203ENST00000448428 CST6Q15828 149 aa13.06□□□□□ -0.32
PRPF40A-203ENST00000448428 TTC31Q49AM3 519 aaPredicted RBP13.06□□□□□ -0.32
PRPF40A-203ENST00000448428 WDR45BQ5MNZ6 344 aa13.06□□□□□ -0.32
PRPF40A-203ENST00000448428 DCAF12L1Q5VU92 463 aa13.06□□□□□ -0.32
PRPF40A-203ENST00000448428 RWDD4Q6NW29 188 aaKnown RBP13.06□□□□□ -0.32
PRPF40A-203ENST00000448428 USP30Q70CQ3 517 aa13.06□□□□□ -0.32
PRPF40A-203ENST00000448428 ERMP1Q7Z2K6 904 aa13.06□□□□□ -0.32
PRPF40A-203ENST00000448428 DRC7Q8IY82 874 aa13.06□□□□□ -0.32
PRPF40A-203ENST00000448428 PYROXD2Q8N2H3 581 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms