RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 UNC45BQ8IWX7 931 aa12.88□□□□□ -0.35
SSR4-205ENST00000447375 DEFB106AQ8N104 65 aa12.88□□□□□ -0.35
SSR4-205ENST00000447375 CPXM2Q8N436 756 aa12.88□□□□□ -0.35
SSR4-205ENST00000447375 MSANTD4Q8NCY6 345 aa12.88□□□□□ -0.35
SSR4-205ENST00000447375 SNX19Q92543 992 aa12.88□□□□□ -0.35
SSR4-205ENST00000447375 IGSF8Q969P0 613 aa12.88□□□□□ -0.35
SSR4-205ENST00000447375 AZIN2Q96A70 460 aa12.88□□□□□ -0.35
SSR4-205ENST00000447375 SLC39A13Q96H72 371 aa12.88□□□□□ -0.35
SSR4-205ENST00000447375 SERPINB11Q96P15 392 aa12.88□□□□□ -0.35
SSR4-205ENST00000447375 XPO6Q96QU8 1125 aaKnown RBP12.88□□□□□ -0.35
SSR4-205ENST00000447375 AGPAT1Q99943 283 aa12.88□□□□□ -0.35
SSR4-205ENST00000447375 SYT11Q9BT88 431 aa12.88□□□□□ -0.35
SSR4-205ENST00000447375 MKRN2Q9H000 416 aaKnown RBP12.88□□□□□ -0.35
SSR4-205ENST00000447375 A0A1W2PQJ5 194 aa12.87□□□□□ -0.35
SSR4-205ENST00000447375 H0Y8X5 98 aa12.87□□□□□ -0.35
SSR4-205ENST00000447375 ENC1O14682 589 aa12.87□□□□□ -0.35
SSR4-205ENST00000447375 CACNG3O60359 315 aa12.87□□□□□ -0.35
SSR4-205ENST00000447375 RFPL3O75679 317 aa12.87□□□□□ -0.35
SSR4-205ENST00000447375 GRAP2O75791 330 aa12.87□□□□□ -0.35
SSR4-205ENST00000447375 TRUB2O95900 331 aaKnown RBP12.87□□□□□ -0.35
SSR4-205ENST00000447375 PENKP01210 267 aaPredicted RBP12.87□□□□□ -0.35
SSR4-205ENST00000447375 TYRP14679 529 aa12.87□□□□□ -0.35
SSR4-205ENST00000447375 NOS2P35228 1153 aa12.87□□□□□ -0.35
SSR4-205ENST00000447375 TMPRSS3P57727 454 aa12.87□□□□□ -0.35
SSR4-205ENST00000447375 CDK17Q00537 523 aa12.87□□□□□ -0.35
SSR4-205ENST00000447375 IL9RQ01113 521 aa12.87□□□□□ -0.35
SSR4-205ENST00000447375 CLEC16AQ2KHT3 1053 aa12.87□□□□□ -0.35
SSR4-205ENST00000447375 COLEC12Q5KU26 742 aa12.87□□□□□ -0.35
SSR4-205ENST00000447375 ADGRF1Q5T601 910 aa12.87□□□□□ -0.35
SSR4-205ENST00000447375 HES3Q5TGS1 186 aa12.87□□□□□ -0.35
SSR4-205ENST00000447375 SFMBT2Q5VUG0 894 aa12.87□□□□□ -0.35
SSR4-205ENST00000447375 BROXQ5VW32 411 aa12.87□□□□□ -0.35
SSR4-205ENST00000447375 NUGGCQ68CJ6 796 aa12.87□□□□□ -0.35
SSR4-205ENST00000447375 TPGS1Q6ZTW0 290 aa12.87□□□□□ -0.35
SSR4-205ENST00000447375 TAC4Q86UU9 113 aa12.87□□□□□ -0.35
SSR4-205ENST00000447375 RNF214Q8ND24 703 aa12.87□□□□□ -0.35
SSR4-205ENST00000447375 SLC30A5Q8TAD4 765 aa12.87□□□□□ -0.35
SSR4-205ENST00000447375 IQCDQ96DY2 449 aa12.87□□□□□ -0.35
SSR4-205ENST00000447375 P2RY11Q96G91 374 aa12.87□□□□□ -0.35
SSR4-205ENST00000447375 FCRL2Q96LA5 508 aaPredicted RBP12.87□□□□□ -0.35
SSR4-205ENST00000447375 LGMNQ99538 433 aa12.87□□□□□ -0.35
SSR4-205ENST00000447375 BBS2Q9BXC9 721 aa12.87□□□□□ -0.35
SSR4-205ENST00000447375 XPO4Q9C0E2 1151 aaKnown RBP12.87□□□□□ -0.35
SSR4-205ENST00000447375 CPNE5Q9HCH3 593 aa12.87□□□□□ -0.35
SSR4-205ENST00000447375 IL17BQ9UHF5 180 aa12.87□□□□□ -0.35
SSR4-205ENST00000447375 SLCO1B1Q9Y6L6 691 aa12.87□□□□□ -0.35
SSR4-205ENST00000447375 CKAP5Q14008 2032 aa12.87□□□□□ -0.35
SSR4-205ENST00000447375 KNL1Q8NG31 2342 aa12.87□□□□□ -0.35
SSR4-205ENST00000447375 NUMA1Q14980 2115 aa12.86□□□□□ -0.35
SSR4-205ENST00000447375 NEDD8-MDP1E9PL57 170 aa12.86□□□□□ -0.35
SSR4-205ENST00000447375 IRAK2O43187 625 aa12.86□□□□□ -0.35
SSR4-205ENST00000447375 LDOC1O95751 146 aaPredicted RBP12.86□□□□□ -0.35
SSR4-205ENST00000447375 TPM3P06753 285 aa12.86□□□□□ -0.35
SSR4-205ENST00000447375 PRKCIP41743 596 aa12.86□□□□□ -0.35
SSR4-205ENST00000447375 SLC11A2P49281 568 aa12.86□□□□□ -0.35
SSR4-205ENST00000447375 PITX1P78337 314 aaPredicted RBP12.86□□□□□ -0.35
SSR4-205ENST00000447375 CENPCQ03188 943 aa12.86□□□□□ -0.35
SSR4-205ENST00000447375 PTP4A2Q12974 167 aa12.86□□□□□ -0.35
SSR4-205ENST00000447375 DNAJC3Q13217 504 aa12.86□□□□□ -0.35
SSR4-205ENST00000447375 TBC1D25Q3MII6 688 aa12.86□□□□□ -0.35
SSR4-205ENST00000447375 C2CD6Q53TS8 623 aa12.86□□□□□ -0.35
SSR4-205ENST00000447375 FYB2Q5VWT5 728 aa12.86□□□□□ -0.35
SSR4-205ENST00000447375 E4F1Q66K89 784 aaPredicted RBP12.86□□□□□ -0.35
SSR4-205ENST00000447375 FBXL19Q6PCT2 694 aa12.86□□□□□ -0.35
SSR4-205ENST00000447375 MMS22LQ6ZRQ5 1243 aa12.86□□□□□ -0.35
SSR4-205ENST00000447375 ARCQ7LC44 396 aa12.86□□□□□ -0.35
SSR4-205ENST00000447375 PHF13Q86YI8 300 aaPredicted RBP12.86□□□□□ -0.35
SSR4-205ENST00000447375 TMPRSS6Q8IU80 811 aa12.86□□□□□ -0.35
SSR4-205ENST00000447375 SYN2Q92777 582 aaPredicted RBP12.86□□□□□ -0.35
SSR4-205ENST00000447375 NT5C3BQ969T7 300 aa12.86□□□□□ -0.35
SSR4-205ENST00000447375 SIPA1Q96FS4 1042 aa12.86□□□□□ -0.35
SSR4-205ENST00000447375 MED8Q96G25 268 aa12.86□□□□□ -0.35
SSR4-205ENST00000447375 NAF1Q96HR8 494 aaKnown RBP12.86□□□□□ -0.35
SSR4-205ENST00000447375 CNDP2Q96KP4 475 aaKnown RBP12.86□□□□□ -0.35
SSR4-205ENST00000447375 IRX2Q9BZI1 471 aaPredicted RBP12.86□□□□□ -0.35
SSR4-205ENST00000447375 NUCKS1Q9H1E3 243 aaKnown RBP12.86□□□□□ -0.35
SSR4-205ENST00000447375 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.86□□□□□ -0.35
SSR4-205ENST00000447375 RRN3Q9NYV6 651 aa12.86□□□□□ -0.35
SSR4-205ENST00000447375 TMEM59LQ9UK28 342 aa12.86□□□□□ -0.35
SSR4-205ENST00000447375 FBXO10Q9UK96 956 aa12.86□□□□□ -0.35
SSR4-205ENST00000447375 CAPN11Q9UMQ6 739 aa12.86□□□□□ -0.35
SSR4-205ENST00000447375 STON1Q9Y6Q2 735 aa12.86□□□□□ -0.35
SSR4-205ENST00000447375 TMEM131Q92545 1883 aa12.86□□□□□ -0.35
SSR4-205ENST00000447375 COL5A1P20908 1838 aaPredicted RBP12.85□□□□□ -0.35
SSR4-205ENST00000447375 KNTC1P50748 2209 aa12.85□□□□□ -0.35
SSR4-205ENST00000447375 COL6A6A6NMZ7 2263 aa12.85□□□□□ -0.35
SSR4-205ENST00000447375 CBFA2T2O43439 604 aa12.85□□□□□ -0.35
SSR4-205ENST00000447375 ACSL4O60488 711 aa12.85□□□□□ -0.35
SSR4-205ENST00000447375 DAB1O75553 588 aa12.85□□□□□ -0.35
SSR4-205ENST00000447375 CISD3P0C7P0 127 aa12.85□□□□□ -0.35
SSR4-205ENST00000447375 ACADMP11310 421 aa12.85□□□□□ -0.35
SSR4-205ENST00000447375 TNFAIP3P21580 790 aa12.85□□□□□ -0.35
SSR4-205ENST00000447375 NSFP46459 744 aaKnown RBP12.85□□□□□ -0.35
SSR4-205ENST00000447375 GRIA4P48058 902 aa12.85□□□□□ -0.35
SSR4-205ENST00000447375 UCNP55089 124 aa12.85□□□□□ -0.35
SSR4-205ENST00000447375 RNASE9P60153 205 aaKnown RBP12.85□□□□□ -0.35
SSR4-205ENST00000447375 ZBED6P86452 979 aa12.85□□□□□ -0.35
SSR4-205ENST00000447375 ASIC2Q16515 512 aa12.85□□□□□ -0.35
SSR4-205ENST00000447375 FAM133BQ5BKY9 247 aaKnown RBP12.85□□□□□ -0.35
SSR4-205ENST00000447375 FAM102AQ5T9C2 384 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms