RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 STK19P49842 368 aaPredicted RBP19.13■□□□□ 0.65
CCDC188-202ENST00000444532 KRT83P78385 493 aa19.13■□□□□ 0.65
CCDC188-202ENST00000444532 MAMLD1Q13495 774 aa19.13■□□□□ 0.65
CCDC188-202ENST00000444532 PUM1Q14671 1186 aaKnown RBP eCLIP19.13■□□□□ 0.65
CCDC188-202ENST00000444532 HGSNATQ68CP4 663 aa19.13■□□□□ 0.65
CCDC188-202ENST00000444532 PLEKHA7Q6IQ23 1121 aa19.13■□□□□ 0.65
CCDC188-202ENST00000444532 ZNF783Q6ZMS7 281 aa19.13■□□□□ 0.65
CCDC188-202ENST00000444532 SLFN11Q7Z7L1 901 aa19.13■□□□□ 0.65
CCDC188-202ENST00000444532 VPS36Q86VN1 386 aa19.13■□□□□ 0.65
CCDC188-202ENST00000444532 DEFB119Q8N690 84 aa19.13■□□□□ 0.65
CCDC188-202ENST00000444532 CADM4Q8NFZ8 388 aa19.13■□□□□ 0.65
CCDC188-202ENST00000444532 CPLX3Q8WVH0 158 aa19.13■□□□□ 0.65
CCDC188-202ENST00000444532 TRIM11Q96F44 468 aa19.13■□□□□ 0.65
CCDC188-202ENST00000444532 C2orf49Q9BVC5 232 aaPredicted RBP19.13■□□□□ 0.65
CCDC188-202ENST00000444532 SMOC1Q9H4F8 434 aa19.13■□□□□ 0.65
CCDC188-202ENST00000444532 MTG2Q9H4K7 406 aa19.13■□□□□ 0.65
CCDC188-202ENST00000444532 PILRBQ9UKJ0 227 aa19.13■□□□□ 0.65
CCDC188-202ENST00000444532 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.12■□□□□ 0.65
CCDC188-202ENST00000444532 ILVBLA1L0T0 632 aa19.12■□□□□ 0.65
CCDC188-202ENST00000444532 CCP110O43303 1012 aa19.12■□□□□ 0.65
CCDC188-202ENST00000444532 SERPING1P05155 500 aa19.12■□□□□ 0.65
CCDC188-202ENST00000444532 PLEKP08567 350 aaPredicted RBP19.12■□□□□ 0.65
CCDC188-202ENST00000444532 ITPKAP23677 461 aa19.12■□□□□ 0.65
CCDC188-202ENST00000444532 AIF1P55008 147 aa19.12■□□□□ 0.65
CCDC188-202ENST00000444532 SCAPQ12770 1279 aa19.12■□□□□ 0.65
CCDC188-202ENST00000444532 SFSWAPQ12872 951 aaKnown RBP19.12■□□□□ 0.65
CCDC188-202ENST00000444532 TTC31Q49AM3 519 aaPredicted RBP19.12■□□□□ 0.65
CCDC188-202ENST00000444532 SYCP2LQ5T4T6 812 aa19.12■□□□□ 0.65
CCDC188-202ENST00000444532 MANEALQ5VSG8 457 aa19.12■□□□□ 0.65
CCDC188-202ENST00000444532 PEAR1Q5VY43 1037 aaPredicted RBP19.12■□□□□ 0.65
CCDC188-202ENST00000444532 RABEPKQ7Z6M1 372 aa19.12■□□□□ 0.65
CCDC188-202ENST00000444532 TFAP2DQ7Z6R9 452 aa19.12■□□□□ 0.65
CCDC188-202ENST00000444532 CACUL1Q86Y37 369 aa19.12■□□□□ 0.65
CCDC188-202ENST00000444532 SLC41A1Q8IVJ1 513 aa19.12■□□□□ 0.65
CCDC188-202ENST00000444532 CCDC185Q8N715 623 aa19.12■□□□□ 0.65
CCDC188-202ENST00000444532 PTPRN2Q92932 1015 aa19.12■□□□□ 0.65
CCDC188-202ENST00000444532 GPR174Q9BXC1 333 aa19.12■□□□□ 0.65
CCDC188-202ENST00000444532 ISCUQ9H1K1 167 aa19.12■□□□□ 0.65
CCDC188-202ENST00000444532 TMEM74BQ9NUR3 256 aa19.12■□□□□ 0.65
CCDC188-202ENST00000444532 ZNF212Q9UDV6 495 aa19.12■□□□□ 0.65
CCDC188-202ENST00000444532 EVLQ9UI08 416 aaPredicted RBP19.12■□□□□ 0.65
CCDC188-202ENST00000444532 ATP9BO43861 1147 aa19.11■□□□□ 0.65
CCDC188-202ENST00000444532 GDF9O60383 454 aa19.11■□□□□ 0.65
CCDC188-202ENST00000444532 GYPCP04921 128 aa19.11■□□□□ 0.65
CCDC188-202ENST00000444532 MYBL1P10243 752 aa19.11■□□□□ 0.65
CCDC188-202ENST00000444532 LIMK1P53667 647 aa19.11■□□□□ 0.65
CCDC188-202ENST00000444532 TDRD12Q587J7 1177 aaKnown RBP19.11■□□□□ 0.65
CCDC188-202ENST00000444532 SCYL2Q6P3W7 929 aa19.11■□□□□ 0.65
CCDC188-202ENST00000444532 USP30Q70CQ3 517 aa19.11■□□□□ 0.65
CCDC188-202ENST00000444532 CEP76Q8TAP6 659 aa19.11■□□□□ 0.65
CCDC188-202ENST00000444532 FRS2Q8WU20 508 aa19.11■□□□□ 0.65
CCDC188-202ENST00000444532 HSPA12BQ96MM6 686 aa19.11■□□□□ 0.65
CCDC188-202ENST00000444532 FAM129BQ96TA1 746 aa19.11■□□□□ 0.65
CCDC188-202ENST00000444532 RTKNQ9BST9 563 aa19.11■□□□□ 0.65
CCDC188-202ENST00000444532 PCED1AQ9H1Q7 454 aa19.11■□□□□ 0.65
CCDC188-202ENST00000444532 NYNRINQ9P2P1 1898 aaKnown RBP19.11■□□□□ 0.65
CCDC188-202ENST00000444532 RHOQP17081 205 aa19.1■□□□□ 0.65
CCDC188-202ENST00000444532 L1CAMP32004 1257 aa19.1■□□□□ 0.65
CCDC188-202ENST00000444532 NUMBP49757 651 aa19.1■□□□□ 0.65
CCDC188-202ENST00000444532 ELAVL3Q14576 367 aaKnown RBP19.1■□□□□ 0.65
CCDC188-202ENST00000444532 CST6Q15828 149 aa19.1■□□□□ 0.65
CCDC188-202ENST00000444532 DUOXA1Q1HG43 343 aa19.1■□□□□ 0.65
CCDC188-202ENST00000444532 ACCSLQ4AC99 568 aa19.1■□□□□ 0.65
CCDC188-202ENST00000444532 EFHC2Q5JST6 749 aa19.1■□□□□ 0.65
CCDC188-202ENST00000444532 WDR45BQ5MNZ6 344 aa19.1■□□□□ 0.65
CCDC188-202ENST00000444532 TCEAL6Q6IPX3 200 aa19.1■□□□□ 0.65
CCDC188-202ENST00000444532 TMC6Q7Z403 805 aa19.1■□□□□ 0.65
CCDC188-202ENST00000444532 SH2D3CQ8N5H7 860 aa19.1■□□□□ 0.65
CCDC188-202ENST00000444532 DCAF4L2Q8NA75 395 aa19.1■□□□□ 0.65
CCDC188-202ENST00000444532 TCEAL3Q969E4 200 aa19.1■□□□□ 0.65
CCDC188-202ENST00000444532 PSMB7Q99436 277 aa19.1■□□□□ 0.65
CCDC188-202ENST00000444532 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.1■□□□□ 0.65
CCDC188-202ENST00000444532 PABPC3Q9H361 631 aaKnown RBP19.1■□□□□ 0.65
CCDC188-202ENST00000444532 CNOT8Q9UFF9 292 aaKnown RBP19.1■□□□□ 0.65
CCDC188-202ENST00000444532 ADAMTS1Q9UHI8 967 aa19.1■□□□□ 0.65
CCDC188-202ENST00000444532 HS3ST2Q9Y278 367 aa19.1■□□□□ 0.65
CCDC188-202ENST00000444532 NCKAP1Q9Y2A7 1128 aa19.1■□□□□ 0.65
CCDC188-202ENST00000444532 SCINQ9Y6U3 715 aa19.1■□□□□ 0.65
CCDC188-202ENST00000444532 CEP250Q9BV73 2442 aa19.1■□□□□ 0.65
CCDC188-202ENST00000444532 A0A0D9SEW6 157 aa19.09■□□□□ 0.65
CCDC188-202ENST00000444532 TMEM191CA6NGB0 347 aa19.09■□□□□ 0.65
CCDC188-202ENST00000444532 FAM72CH0Y354 149 aa19.09■□□□□ 0.65
CCDC188-202ENST00000444532 SLC30A4O14863 429 aa19.09■□□□□ 0.65
CCDC188-202ENST00000444532 ATMINO43313 823 aaPredicted RBP19.09■□□□□ 0.65
CCDC188-202ENST00000444532 LRIG2O94898 1065 aa19.09■□□□□ 0.65
CCDC188-202ENST00000444532 CASP14P31944 242 aa19.09■□□□□ 0.65
CCDC188-202ENST00000444532 MAPKAPK2P49137 400 aa19.09■□□□□ 0.65
CCDC188-202ENST00000444532 OGDHQ02218 1023 aa19.09■□□□□ 0.65
CCDC188-202ENST00000444532 DLG2Q15700 870 aa19.09■□□□□ 0.65
CCDC188-202ENST00000444532 TRIM61Q5EBN2 209 aa19.09■□□□□ 0.65
CCDC188-202ENST00000444532 FAM72AQ5TYM5 149 aa19.09■□□□□ 0.65
CCDC188-202ENST00000444532 SPECC1LQ69YQ0 1117 aa19.09■□□□□ 0.65
CCDC188-202ENST00000444532 FAM72DQ6L9T8 149 aa19.09■□□□□ 0.65
CCDC188-202ENST00000444532 RWDD4Q6NW29 188 aaKnown RBP19.09■□□□□ 0.65
CCDC188-202ENST00000444532 SLC23A3Q6PIS1 610 aa19.09■□□□□ 0.65
CCDC188-202ENST00000444532 FAM124AQ86V42 546 aa19.09■□□□□ 0.65
CCDC188-202ENST00000444532 NLRP14Q86W24 1093 aa19.09■□□□□ 0.65
CCDC188-202ENST00000444532 FAM72BQ86X60 149 aa19.09■□□□□ 0.65
CCDC188-202ENST00000444532 DNAAF5Q86Y56 855 aa19.09■□□□□ 0.65
CCDC188-202ENST00000444532 MMAAQ8IVH4 418 aaKnown RBP19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms