RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 ACAD11Q709F0 780 aa14.38□□□□□ -0.11
SMARCA4-204ENST00000444061 CHST9Q7L1S5 443 aa14.38□□□□□ -0.11
SMARCA4-204ENST00000444061 ARHGEF4Q9NR80 690 aa14.38□□□□□ -0.11
SMARCA4-204ENST00000444061 COMMD8Q9NX08 183 aa14.38□□□□□ -0.11
SMARCA4-204ENST00000444061 E9PAM4 449 aa14.38□□□□□ -0.11
SMARCA4-204ENST00000444061 PRPF4O43172 522 aaKnown RBP eCLIP14.38□□□□□ -0.11
SMARCA4-204ENST00000444061 HAPLN1P10915 354 aaPredicted RBP14.38□□□□□ -0.11
SMARCA4-204ENST00000444061 FAM83EQ2M2I3 478 aa14.38□□□□□ -0.11
SMARCA4-204ENST00000444061 GRASPQ7Z6J2 395 aaPredicted RBP14.38□□□□□ -0.11
SMARCA4-204ENST00000444061 TMCO2Q7Z6W1 182 aaPredicted RBP14.38□□□□□ -0.11
SMARCA4-204ENST00000444061 MIOSQ9NXC5 875 aa14.38□□□□□ -0.11
SMARCA4-204ENST00000444061 RCOR3Q9P2K3 495 aaPredicted RBP14.38□□□□□ -0.11
SMARCA4-204ENST00000444061 BAG5Q9UL15 447 aa14.38□□□□□ -0.11
SMARCA4-204ENST00000444061 OGDHLQ9ULD0 1010 aa14.38□□□□□ -0.11
SMARCA4-204ENST00000444061 hCG_1818297A0A087WSY0 165 aa14.37□□□□□ -0.11
SMARCA4-204ENST00000444061 E2F8A0AVK6 867 aa14.37□□□□□ -0.11
SMARCA4-204ENST00000444061 DNALI1O14645 258 aaPredicted RBP14.37□□□□□ -0.11
SMARCA4-204ENST00000444061 USP12O75317 370 aa14.37□□□□□ -0.11
SMARCA4-204ENST00000444061 SOX4Q06945 474 aaPredicted RBP14.37□□□□□ -0.11
SMARCA4-204ENST00000444061 C10orf88Q9H8K7 445 aa14.37□□□□□ -0.11
SMARCA4-204ENST00000444061 MYH6P13533 1939 aa14.37□□□□□ -0.11
SMARCA4-204ENST00000444061 CHUKO15111 745 aa14.37□□□□□ -0.11
SMARCA4-204ENST00000444061 DDX6P26196 483 aaKnown RBP eCLIP14.37□□□□□ -0.115e-9■■□□□ 13.9
SMARCA4-204ENST00000444061 HTR7P34969 479 aa14.37□□□□□ -0.11
SMARCA4-204ENST00000444061 MARCKSL1P49006 195 aa14.37□□□□□ -0.11
SMARCA4-204ENST00000444061 SERPINH1P50454 418 aaKnown RBP14.37□□□□□ -0.11
SMARCA4-204ENST00000444061 TAF5Q15542 800 aa14.37□□□□□ -0.11
SMARCA4-204ENST00000444061 MARCH8Q5T0T0 291 aa14.37□□□□□ -0.11
SMARCA4-204ENST00000444061 CASKIN2Q8WXE0 1202 aa14.37□□□□□ -0.11
SMARCA4-204ENST00000444061 PPP1R10Q96QC0 940 aaKnown RBP14.37□□□□□ -0.11
SMARCA4-204ENST00000444061 SMG5Q9UPR3 1016 aaKnown RBP14.37□□□□□ -0.11
SMARCA4-204ENST00000444061 LRCH4O75427 683 aa14.37□□□□□ -0.11
SMARCA4-204ENST00000444061 DDHD2O94830 711 aa14.37□□□□□ -0.11
SMARCA4-204ENST00000444061 WDR5P61964 334 aaKnown RBP14.37□□□□□ -0.11
SMARCA4-204ENST00000444061 IFT88Q13099 833 aa14.37□□□□□ -0.11
SMARCA4-204ENST00000444061 MPP3Q13368 585 aa14.37□□□□□ -0.11
SMARCA4-204ENST00000444061 SLC29A2Q14542 456 aa14.37□□□□□ -0.11
SMARCA4-204ENST00000444061 PARP15Q460N3 678 aa14.37□□□□□ -0.11
SMARCA4-204ENST00000444061 TXNDC8Q6A555 127 aa14.37□□□□□ -0.11
SMARCA4-204ENST00000444061 MRPL10Q7Z7H8 261 aaKnown RBP14.37□□□□□ -0.11
SMARCA4-204ENST00000444061 PSTKQ8IV42 348 aaKnown RBP14.37□□□□□ -0.11
SMARCA4-204ENST00000444061 ATP6V1G3Q96LB4 118 aa14.37□□□□□ -0.11
SMARCA4-204ENST00000444061 EML4Q9HC35 981 aaKnown RBP14.37□□□□□ -0.11
SMARCA4-204ENST00000444061 RAD54BQ9Y620 910 aa14.37□□□□□ -0.11
SMARCA4-204ENST00000444061 TRIM49D1C9J1S8 452 aa14.37□□□□□ -0.11
SMARCA4-204ENST00000444061 AGTP01019 485 aa14.37□□□□□ -0.11
SMARCA4-204ENST00000444061 ZNF7P17097 686 aaPredicted RBP14.37□□□□□ -0.11
SMARCA4-204ENST00000444061 NFKB1P19838 968 aa14.37□□□□□ -0.11
SMARCA4-204ENST00000444061 PSMB4P28070 264 aa14.37□□□□□ -0.11
SMARCA4-204ENST00000444061 PPP2R2AP63151 447 aa14.37□□□□□ -0.11
SMARCA4-204ENST00000444061 PHEXP78562 749 aa14.37□□□□□ -0.11
SMARCA4-204ENST00000444061 C4orf33Q8N1A6 199 aa14.37□□□□□ -0.11
SMARCA4-204ENST00000444061 SNX31Q8N9S9 440 aa14.37□□□□□ -0.11
SMARCA4-204ENST00000444061 ROPN1BQ9BZX4 212 aaPredicted RBP14.37□□□□□ -0.11
SMARCA4-204ENST00000444061 ROPN1Q9HAT0 212 aaPredicted RBP14.37□□□□□ -0.11
SMARCA4-204ENST00000444061 RCCD1A6NED2 376 aa14.36□□□□□ -0.11
SMARCA4-204ENST00000444061 CES1P23141 567 aa14.36□□□□□ -0.11
SMARCA4-204ENST00000444061 WASP42768 502 aa14.36□□□□□ -0.11
SMARCA4-204ENST00000444061 MTHFRP42898 656 aa14.36□□□□□ -0.11
SMARCA4-204ENST00000444061 TBCCQ15814 346 aa14.36□□□□□ -0.11
SMARCA4-204ENST00000444061 AADACL2Q6P093 401 aa14.36□□□□□ -0.11
SMARCA4-204ENST00000444061 DDIASQ8IXT1 998 aa14.36□□□□□ -0.11
SMARCA4-204ENST00000444061 LGMNQ99538 433 aa14.36□□□□□ -0.11
SMARCA4-204ENST00000444061 PIH1D1Q9NWS0 290 aaKnown RBP14.36□□□□□ -0.11
SMARCA4-204ENST00000444061 TAF1LQ8IZX4 1826 aa14.36□□□□□ -0.11
SMARCA4-204ENST00000444061 MEIS3P2A8K0S8 358 aa14.36□□□□□ -0.11
SMARCA4-204ENST00000444061 IFRD1O00458 451 aaPredicted RBP14.36□□□□□ -0.11
SMARCA4-204ENST00000444061 EIF3HO15372 352 aaKnown RBP eCLIP14.36□□□□□ -0.111e-6■□□□□ 8.3
SMARCA4-204ENST00000444061 KIF1CO43896 1103 aaKnown RBP14.36□□□□□ -0.11
SMARCA4-204ENST00000444061 MGAT1P26572 445 aa14.36□□□□□ -0.11
SMARCA4-204ENST00000444061 L1CAMP32004 1257 aa14.36□□□□□ -0.11
SMARCA4-204ENST00000444061 MAGEA11P43364 429 aa14.36□□□□□ -0.11
SMARCA4-204ENST00000444061 CDH4P55283 916 aa14.36□□□□□ -0.11
SMARCA4-204ENST00000444061 MGAT5Q09328 741 aa14.36□□□□□ -0.11
SMARCA4-204ENST00000444061 AUHQ13825 339 aaKnown RBP14.36□□□□□ -0.11
SMARCA4-204ENST00000444061 RNF19BQ6ZMZ0 732 aa14.36□□□□□ -0.11
SMARCA4-204ENST00000444061 SZRD1Q7Z422 152 aa14.36□□□□□ -0.11
SMARCA4-204ENST00000444061 MYO1HQ8N1T3 1032 aa14.36□□□□□ -0.11
SMARCA4-204ENST00000444061 CSPG4P5Q96PW8 444 aa14.36□□□□□ -0.11
SMARCA4-204ENST00000444061 KLF6Q99612 283 aaPredicted RBP14.36□□□□□ -0.11
SMARCA4-204ENST00000444061 ZNF212Q9UDV6 495 aa14.36□□□□□ -0.11
SMARCA4-204ENST00000444061 C2CD4BA6NLJ0 364 aa14.36□□□□□ -0.11
SMARCA4-204ENST00000444061 DGKGP49619 791 aa14.36□□□□□ -0.11
SMARCA4-204ENST00000444061 CAP1Q01518 475 aa14.36□□□□□ -0.11
SMARCA4-204ENST00000444061 DPYSL3Q14195 570 aa14.36□□□□□ -0.11
SMARCA4-204ENST00000444061 CEP68Q76N32 757 aa14.36□□□□□ -0.11
SMARCA4-204ENST00000444061 RIBC1Q8N443 379 aaPredicted RBP14.36□□□□□ -0.11
SMARCA4-204ENST00000444061 FAM136AQ96C01 138 aa14.36□□□□□ -0.11
SMARCA4-204ENST00000444061 MIR1-1HGQ9H1L0 117 aa14.36□□□□□ -0.11
SMARCA4-204ENST00000444061 RAD18Q9NS91 495 aa14.36□□□□□ -0.11
SMARCA4-204ENST00000444061 APOBEC2Q9Y235 224 aaKnown RBP14.36□□□□□ -0.11
SMARCA4-204ENST00000444061 A0A0G2JND7 137 aa14.36□□□□□ -0.11
SMARCA4-204ENST00000444061 TBX18O95935 607 aa14.36□□□□□ -0.11
SMARCA4-204ENST00000444061 EPHX1P07099 455 aa14.36□□□□□ -0.11
SMARCA4-204ENST00000444061 CHRNB2P17787 502 aa14.36□□□□□ -0.11
SMARCA4-204ENST00000444061 MAXP61244 160 aa14.36□□□□□ -0.11
SMARCA4-204ENST00000444061 INCA1Q0VD86 236 aa14.36□□□□□ -0.11
SMARCA4-204ENST00000444061 LRRC26Q2I0M4 334 aa14.36□□□□□ -0.11
SMARCA4-204ENST00000444061 AAK1Q2M2I8 961 aa14.36□□□□□ -0.11
SMARCA4-204ENST00000444061 RNF168Q8IYW5 571 aaPredicted RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms