RNA–Protein interactions for RNA: ENST00000443891.5

CTDSP1-204, Transcript of CTD small phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDSP1, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-204ENST00000443891 OR14C36Q8NHC7 312 aa16.79■□□□□ 0.28
CTDSP1-204ENST00000443891 NT5C3BQ969T7 300 aa16.79■□□□□ 0.28
CTDSP1-204ENST00000443891 C1orf74Q96LT6 269 aa16.79■□□□□ 0.28
CTDSP1-204ENST00000443891 CCDC86Q9H6F5 360 aaKnown RBP16.79■□□□□ 0.28
CTDSP1-204ENST00000443891 WDCPQ9H6R7 721 aa16.79■□□□□ 0.28
CTDSP1-204ENST00000443891 SIX2Q9NPC8 291 aa16.79■□□□□ 0.28
CTDSP1-204ENST00000443891 GDF3Q9NR23 364 aa16.79■□□□□ 0.28
CTDSP1-204ENST00000443891 ARHGEF38Q9NXL2 777 aa16.79■□□□□ 0.28
CTDSP1-204ENST00000443891 FARP1Q9Y4F1 1045 aaPredicted RBP16.79■□□□□ 0.28
CTDSP1-204ENST00000443891 PCDHGA1Q9Y5H4 931 aa16.79■□□□□ 0.28
CTDSP1-204ENST00000443891 FAM208BQ5VWN6 2430 aa16.78■□□□□ 0.28
CTDSP1-204ENST00000443891 NUMA1Q14980 2115 aa16.78■□□□□ 0.28
CTDSP1-204ENST00000443891 A0A1W2PR77 199 aa16.78■□□□□ 0.28
CTDSP1-204ENST00000443891 M0QYT0 321 aa16.78■□□□□ 0.28
CTDSP1-204ENST00000443891 MCF2LO15068 1137 aa16.78■□□□□ 0.28
CTDSP1-204ENST00000443891 ERBB2P04626 1255 aa16.78■□□□□ 0.28
CTDSP1-204ENST00000443891 C1SP09871 688 aa16.78■□□□□ 0.28
CTDSP1-204ENST00000443891 ARRB1P49407 418 aaPredicted RBP16.78■□□□□ 0.28
CTDSP1-204ENST00000443891 CXCR3P49682 368 aa16.78■□□□□ 0.28
CTDSP1-204ENST00000443891 SCAPQ12770 1279 aa16.78■□□□□ 0.28
CTDSP1-204ENST00000443891 NME3Q13232 169 aa16.78■□□□□ 0.28
CTDSP1-204ENST00000443891 KCNJ12Q14500 433 aa16.78■□□□□ 0.28
CTDSP1-204ENST00000443891 PTPN20Q4JDL3 420 aa16.78■□□□□ 0.28
CTDSP1-204ENST00000443891 VWA3BQ502W6 1294 aa16.78■□□□□ 0.28
CTDSP1-204ENST00000443891 ARCQ7LC44 396 aa16.78■□□□□ 0.28
CTDSP1-204ENST00000443891 SETD3Q86TU7 594 aaPredicted RBP16.78■□□□□ 0.28
CTDSP1-204ENST00000443891 PRPF39Q86UA1 669 aaKnown RBP16.78■□□□□ 0.28
CTDSP1-204ENST00000443891 PASD1Q8IV76 773 aa16.78■□□□□ 0.28
CTDSP1-204ENST00000443891 MFSD2AQ8NA29 543 aa16.78■□□□□ 0.28
CTDSP1-204ENST00000443891 MSANTD4Q8NCY6 345 aa16.78■□□□□ 0.28
CTDSP1-204ENST00000443891 CCDC114Q96M63 670 aa16.78■□□□□ 0.28
CTDSP1-204ENST00000443891 SLC6A18Q96N87 628 aa16.78■□□□□ 0.28
CTDSP1-204ENST00000443891 NPY6RQ99463 290 aa16.78■□□□□ 0.28
CTDSP1-204ENST00000443891 TUBGCP2Q9BSJ2 902 aa16.78■□□□□ 0.28
CTDSP1-204ENST00000443891 C2orf49Q9BVC5 232 aaPredicted RBP16.78■□□□□ 0.28
CTDSP1-204ENST00000443891 AASDHPPTQ9NRN7 309 aa16.78■□□□□ 0.28
CTDSP1-204ENST00000443891 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.78■□□□□ 0.287e-8■□□□□ 10.4
CTDSP1-204ENST00000443891 CHMP5Q9NZZ3 219 aa16.78■□□□□ 0.28
CTDSP1-204ENST00000443891 VPS28Q9UK41 221 aa16.78■□□□□ 0.28
CTDSP1-204ENST00000443891 VANGL2Q9ULK5 521 aa16.78■□□□□ 0.28
CTDSP1-204ENST00000443891 HS3ST2Q9Y278 367 aa16.78■□□□□ 0.28
CTDSP1-204ENST00000443891 OR51B4Q9Y5P0 310 aa16.78■□□□□ 0.28
CTDSP1-204ENST00000443891 HS3ST4Q9Y661 456 aa16.78■□□□□ 0.28
CTDSP1-204ENST00000443891 SYNJ2BP-COX16A0A087WUM0 186 aa16.77■□□□□ 0.28
CTDSP1-204ENST00000443891 TBC1D3DA0A087WVF3 549 aa16.77■□□□□ 0.28
CTDSP1-204ENST00000443891 TBC1D3IA0A087WXS9 549 aa16.77■□□□□ 0.28
CTDSP1-204ENST00000443891 TBC1D3EA0A087X179 549 aa16.77■□□□□ 0.28
CTDSP1-204ENST00000443891 TBC1D3KA0A087X1G2 549 aa16.77■□□□□ 0.28
CTDSP1-204ENST00000443891 TBC1D3FA6NER0 549 aaPredicted RBP16.77■□□□□ 0.28
CTDSP1-204ENST00000443891 TBC1D3LB9A6J9 549 aa16.77■□□□□ 0.28
CTDSP1-204ENST00000443891 PLRG1O43660 514 aaKnown RBP16.77■□□□□ 0.28
CTDSP1-204ENST00000443891 RNGTTO60942 597 aaKnown RBP16.77■□□□□ 0.28
CTDSP1-204ENST00000443891 PAGE1O75459 146 aa16.77■□□□□ 0.28
CTDSP1-204ENST00000443891 GRAP2O75791 330 aa16.77■□□□□ 0.28
CTDSP1-204ENST00000443891 LSM8O95777 96 aaKnown RBP16.77■□□□□ 0.28
CTDSP1-204ENST00000443891 ATXN1LP0C7T5 689 aaKnown RBP16.77■□□□□ 0.28
CTDSP1-204ENST00000443891 TBC1D3HP0C7X1 549 aa16.77■□□□□ 0.28
CTDSP1-204ENST00000443891 DRD3P35462 400 aa16.77■□□□□ 0.28
CTDSP1-204ENST00000443891 RXRGP48443 463 aa16.77■□□□□ 0.28
CTDSP1-204ENST00000443891 STK19P49842 368 aaPredicted RBP16.77■□□□□ 0.28
CTDSP1-204ENST00000443891 DLG2Q15700 870 aa16.77■□□□□ 0.28
CTDSP1-204ENST00000443891 KCNT1Q5JUK3 1230 aa16.77■□□□□ 0.28
CTDSP1-204ENST00000443891 TBC1D3GQ6DHY5 549 aa16.77■□□□□ 0.28
CTDSP1-204ENST00000443891 TBC1D3CQ6IPX1 549 aa16.77■□□□□ 0.28
CTDSP1-204ENST00000443891 NAPEPLDQ6IQ20 393 aa16.77■□□□□ 0.28
CTDSP1-204ENST00000443891 NEK5Q6P3R8 708 aa16.77■□□□□ 0.28
CTDSP1-204ENST00000443891 LRRC31Q6UY01 552 aa16.77■□□□□ 0.28
CTDSP1-204ENST00000443891 SLC47A2Q86VL8 602 aa16.77■□□□□ 0.28
CTDSP1-204ENST00000443891 TRIM69Q86WT6 500 aa16.77■□□□□ 0.28
CTDSP1-204ENST00000443891 TBC1D3Q8IZP1 549 aaPredicted RBP16.77■□□□□ 0.28
CTDSP1-204ENST00000443891 SH2D3CQ8N5H7 860 aa16.77■□□□□ 0.28
CTDSP1-204ENST00000443891 C18orf8Q96DM3 657 aa16.77■□□□□ 0.28
CTDSP1-204ENST00000443891 SERAC1Q96JX3 654 aa16.77■□□□□ 0.28
CTDSP1-204ENST00000443891 PDCL3Q9H2J4 239 aa16.77■□□□□ 0.28
CTDSP1-204ENST00000443891 CLSTN2Q9H4D0 955 aa16.77■□□□□ 0.28
CTDSP1-204ENST00000443891 EBF2Q9HAK2 575 aa16.77■□□□□ 0.28
CTDSP1-204ENST00000443891 COX16Q9P0S2 106 aa16.77■□□□□ 0.28
CTDSP1-204ENST00000443891 FTSJ1Q9UET6 329 aa16.77■□□□□ 0.28
CTDSP1-204ENST00000443891 PPM1HQ9ULR3 514 aa16.77■□□□□ 0.28
CTDSP1-204ENST00000443891 BTBD3Q9Y2F9 522 aa16.77■□□□□ 0.28
CTDSP1-204ENST00000443891 CXorf51AA0A1B0GTR3 108 aa16.76■□□□□ 0.27
CTDSP1-204ENST00000443891 DRGXA6NNA5 263 aa16.76■□□□□ 0.27
CTDSP1-204ENST00000443891 TLR4O00206 839 aa16.76■□□□□ 0.27
CTDSP1-204ENST00000443891 CLCN6P51797 869 aa16.76■□□□□ 0.27
CTDSP1-204ENST00000443891 APBA1Q02410 837 aa16.76■□□□□ 0.27
CTDSP1-204ENST00000443891 SMAD1Q15797 465 aaKnown RBP16.76■□□□□ 0.27
CTDSP1-204ENST00000443891 SLC25A52Q3SY17 297 aa16.76■□□□□ 0.27
CTDSP1-204ENST00000443891 ACCSLQ4AC99 568 aa16.76■□□□□ 0.27
CTDSP1-204ENST00000443891 MIIPQ5JXC2 388 aa16.76■□□□□ 0.27
CTDSP1-204ENST00000443891 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.76■□□□□ 0.27
CTDSP1-204ENST00000443891 CIR1Q86X95 450 aaPredicted RBP16.76■□□□□ 0.27
CTDSP1-204ENST00000443891 TKTL2Q9H0I9 626 aa16.76■□□□□ 0.27
CTDSP1-204ENST00000443891 RETREG1Q9H6L5 497 aa16.76■□□□□ 0.27
CTDSP1-204ENST00000443891 PREBQ9HCU5 417 aa16.76■□□□□ 0.27
CTDSP1-204ENST00000443891 DAAM1Q9Y4D1 1078 aa16.76■□□□□ 0.27
CTDSP1-204ENST00000443891 CABIN1Q9Y6J0 2220 aa16.76■□□□□ 0.27
CTDSP1-204ENST00000443891 CFAP47Q6ZTR5 3102 aa16.75■□□□□ 0.27
CTDSP1-204ENST00000443891 WNT1P04628 370 aa16.75■□□□□ 0.27
CTDSP1-204ENST00000443891 ITGAVP06756 1048 aa16.75■□□□□ 0.27
CTDSP1-204ENST00000443891 CYP11B1P15538 503 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms