RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 POLR1DQ9Y2S0 133 aa11.42□□□□□ -0.58
FN1-211ENST00000443816 DUSP11O75319 330 aaKnown RBP11.42□□□□□ -0.58
FN1-211ENST00000443816 PLIN5Q00G26 463 aa11.42□□□□□ -0.58
FN1-211ENST00000443816 ARID3BQ8IVW6 561 aaPredicted RBP11.42□□□□□ -0.58
FN1-211ENST00000443816 ACTL9Q8TC94 416 aa11.42□□□□□ -0.58
FN1-211ENST00000443816 INPP5DQ92835 1189 aa11.42□□□□□ -0.58
FN1-211ENST00000443816 KIAA1522Q9P206 1035 aaPredicted RBP11.42□□□□□ -0.58
FN1-211ENST00000443816 E5RJQ4 531 aa11.41□□□□□ -0.58
FN1-211ENST00000443816 OR10H2O60403 315 aa11.41□□□□□ -0.58
FN1-211ENST00000443816 ABCB1P08183 1280 aaPredicted RBP11.41□□□□□ -0.58
FN1-211ENST00000443816 ANXA5P08758 320 aa11.41□□□□□ -0.58
FN1-211ENST00000443816 FCGR1AP12314 374 aa11.41□□□□□ -0.58
FN1-211ENST00000443816 AMPD1P23109 780 aa11.41□□□□□ -0.58
FN1-211ENST00000443816 CNGA2Q16280 664 aa11.41□□□□□ -0.58
FN1-211ENST00000443816 PPP1R15BQ5SWA1 713 aa11.41□□□□□ -0.58
FN1-211ENST00000443816 RAD9BQ6WBX8 426 aa11.41□□□□□ -0.58
FN1-211ENST00000443816 PRR23CQ6ZRP0 262 aa11.41□□□□□ -0.58
FN1-211ENST00000443816 MILR1Q7Z6M3 343 aa11.41□□□□□ -0.58
FN1-211ENST00000443816 TTC7BQ86TV6 843 aa11.41□□□□□ -0.58
FN1-211ENST00000443816 POMGNT2Q8NAT1 580 aa11.41□□□□□ -0.58
FN1-211ENST00000443816 ZNF473Q8WTR7 871 aaKnown RBP11.41□□□□□ -0.58
FN1-211ENST00000443816 ARL15Q9NXU5 204 aa11.41□□□□□ -0.58
FN1-211ENST00000443816 OR6A2O95222 327 aa11.41□□□□□ -0.58
FN1-211ENST00000443816 CCNDBP1O95273 360 aa11.41□□□□□ -0.58
FN1-211ENST00000443816 NAA20P61599 178 aa11.41□□□□□ -0.58
FN1-211ENST00000443816 ANGPT1Q15389 498 aa11.41□□□□□ -0.58
FN1-211ENST00000443816 LRRC23Q53EV4 343 aaPredicted RBP11.41□□□□□ -0.58
FN1-211ENST00000443816 COMMD2Q86X83 199 aa11.41□□□□□ -0.58
FN1-211ENST00000443816 KIAA0895Q8NCT3 520 aa11.41□□□□□ -0.58
FN1-211ENST00000443816 HEXDCQ8WVB3 486 aa11.41□□□□□ -0.58
FN1-211ENST00000443816 ERP27Q96DN0 273 aa11.41□□□□□ -0.58
FN1-211ENST00000443816 CACNA1SQ13698 1873 aa11.41□□□□□ -0.58
FN1-211ENST00000443816 CCDC154A6NI56 674 aa11.41□□□□□ -0.58
FN1-211ENST00000443816 CPA3P15088 417 aa11.41□□□□□ -0.58
FN1-211ENST00000443816 NTSP30990 170 aa11.41□□□□□ -0.58
FN1-211ENST00000443816 CLK2P49760 499 aaKnown RBP11.41□□□□□ -0.58
FN1-211ENST00000443816 CCZ1BP86790 482 aa11.41□□□□□ -0.58
FN1-211ENST00000443816 CCZ1P86791 482 aaPredicted RBP11.41□□□□□ -0.58
FN1-211ENST00000443816 DMTNQ08495 405 aa11.41□□□□□ -0.58
FN1-211ENST00000443816 RPAINQ86UA6 219 aa11.41□□□□□ -0.58
FN1-211ENST00000443816 FNDC5Q8NAU1 212 aa11.41□□□□□ -0.58
FN1-211ENST00000443816 PHF21BQ96EK2 531 aa11.41□□□□□ -0.58
FN1-211ENST00000443816 ZBTB45Q96K62 511 aaPredicted RBP11.41□□□□□ -0.58
FN1-211ENST00000443816 KLF6Q99612 283 aaPredicted RBP11.41□□□□□ -0.58
FN1-211ENST00000443816 ATP6V1HQ9UI12 483 aa11.41□□□□□ -0.58
FN1-211ENST00000443816 PIK3C2AO00443 1686 aa11.41□□□□□ -0.58
FN1-211ENST00000443816 ZNF682O95780 498 aa11.41□□□□□ -0.58
FN1-211ENST00000443816 LSP1P33241 339 aa11.41□□□□□ -0.58
FN1-211ENST00000443816 CCT8P50990 548 aa11.41□□□□□ -0.58
FN1-211ENST00000443816 SHCBP1LQ9BZQ2 653 aa11.41□□□□□ -0.58
FN1-211ENST00000443816 SCN11AQ9UI33 1791 aa11.41□□□□□ -0.58
FN1-211ENST00000443816 TM4SF1P30408 202 aa11.41□□□□□ -0.58
FN1-211ENST00000443816 HSD17B3P37058 310 aa11.41□□□□□ -0.58
FN1-211ENST00000443816 TEAD4Q15561 434 aa11.41□□□□□ -0.58
FN1-211ENST00000443816 SLC24A5Q71RS6 500 aa11.41□□□□□ -0.58
FN1-211ENST00000443816 GALNT4Q8N4A0 578 aa11.41□□□□□ -0.58
FN1-211ENST00000443816 KCTD14Q9BQ13 255 aaPredicted RBP11.41□□□□□ -0.58
FN1-211ENST00000443816 IRX2Q9BZI1 471 aaPredicted RBP11.41□□□□□ -0.58
FN1-211ENST00000443816 AVENQ9NQS1 362 aaPredicted RBP11.41□□□□□ -0.58
FN1-211ENST00000443816 XRN1Q8IZH2 1706 aaKnown RBP11.41□□□□□ -0.58
FN1-211ENST00000443816 A8MX80 341 aa11.41□□□□□ -0.58
FN1-211ENST00000443816 CES2O00748 559 aa11.41□□□□□ -0.58
FN1-211ENST00000443816 TRDMT1O14717 391 aaKnown RBP11.41□□□□□ -0.58
FN1-211ENST00000443816 AVILO75366 819 aa11.41□□□□□ -0.58
FN1-211ENST00000443816 PWP1Q13610 501 aa11.41□□□□□ -0.58
FN1-211ENST00000443816 NTRK3Q16288 839 aa11.41□□□□□ -0.58
FN1-211ENST00000443816 DUSP28Q4G0W2 176 aa11.41□□□□□ -0.58
FN1-211ENST00000443816 TREML2Q5T2D2 321 aa11.41□□□□□ -0.58
FN1-211ENST00000443816 RBM43Q6ZSC3 357 aaKnown RBP11.41□□□□□ -0.58
FN1-211ENST00000443816 MIER2Q8N344 545 aa11.41□□□□□ -0.58
FN1-211ENST00000443816 RIN3Q8TB24 985 aa11.41□□□□□ -0.58
FN1-211ENST00000443816 ELMO1Q92556 727 aa11.41□□□□□ -0.58
FN1-211ENST00000443816 SNX6Q9UNH7 406 aa11.41□□□□□ -0.58
FN1-211ENST00000443816 CAB39Q9Y376 341 aaPredicted RBP11.41□□□□□ -0.58
FN1-211ENST00000443816 TMEM150BA6NC51 233 aa11.4□□□□□ -0.58
FN1-211ENST00000443816 DEFA1P59665 94 aa11.4□□□□□ -0.58
FN1-211ENST00000443816 DEFA3P59666 94 aa11.4□□□□□ -0.58
FN1-211ENST00000443816 BHLHB9Q6PI77 547 aa11.4□□□□□ -0.58
FN1-211ENST00000443816 C7orf61Q8IZ16 206 aa11.4□□□□□ -0.58
FN1-211ENST00000443816 BEND7Q8N7W2 519 aaPredicted RBP11.4□□□□□ -0.58
FN1-211ENST00000443816 CAMTA1Q9Y6Y1 1673 aa11.4□□□□□ -0.58
FN1-211ENST00000443816 GP5P40197 560 aa11.4□□□□□ -0.58
FN1-211ENST00000443816 ZNF571Q7Z3V5 609 aaPredicted RBP11.4□□□□□ -0.58
FN1-211ENST00000443816 MYLPFQ96A32 169 aa11.4□□□□□ -0.58
FN1-211ENST00000443816 KLRG1Q96E93 195 aa11.4□□□□□ -0.58
FN1-211ENST00000443816 EPS8L2Q9H6S3 715 aa11.4□□□□□ -0.58
FN1-211ENST00000443816 AP3M1Q9Y2T2 418 aa11.4□□□□□ -0.58
FN1-211ENST00000443816 SP100P23497 879 aaPredicted RBP11.4□□□□□ -0.58
FN1-211ENST00000443816 THAP11Q96EK4 314 aa11.4□□□□□ -0.58
FN1-211ENST00000443816 ZFYVE1Q9HBF4 777 aa11.4□□□□□ -0.58
FN1-211ENST00000443816 EXOSC4Q9NPD3 245 aaKnown RBP11.4□□□□□ -0.58
FN1-211ENST00000443816 NFATC1O95644 943 aa11.4□□□□□ -0.58
FN1-211ENST00000443816 RPL3P39023 403 aaKnown RBP11.4□□□□□ -0.58
FN1-211ENST00000443816 GLUD2P49448 558 aa11.4□□□□□ -0.58
FN1-211ENST00000443816 SNX30Q5VWJ9 437 aa11.4□□□□□ -0.58
FN1-211ENST00000443816 RAP1GAP2Q684P5 730 aa11.4□□□□□ -0.58
FN1-211ENST00000443816 LRRC52Q8N7C0 313 aa11.4□□□□□ -0.58
FN1-211ENST00000443816 ANKRD52Q8NB46 1076 aa11.4□□□□□ -0.58
FN1-211ENST00000443816 FAM120BQ96EK7 910 aaKnown RBP11.4□□□□□ -0.58
FN1-211ENST00000443816 PAFAH2Q99487 392 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms