RNA–Protein interactions for RNA: ENST00000442721.1

TNXB-202, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 372 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-202ENST00000442721 RAP1GAP2Q684P5 730 aa12.27□□□□□ -0.45
TNXB-202ENST00000442721 TBC1D3GQ6DHY5 549 aa12.27□□□□□ -0.45
TNXB-202ENST00000442721 TBC1D3CQ6IPX1 549 aa12.27□□□□□ -0.45
TNXB-202ENST00000442721 PCSK4Q6UW60 755 aa12.27□□□□□ -0.45
TNXB-202ENST00000442721 PRPF39Q86UA1 669 aaKnown RBP12.27□□□□□ -0.45
TNXB-202ENST00000442721 CHSY1Q86X52 802 aa12.27□□□□□ -0.45
TNXB-202ENST00000442721 TBC1D3Q8IZP1 549 aaPredicted RBP12.27□□□□□ -0.45
TNXB-202ENST00000442721 ZNF843Q8N446 348 aa12.27□□□□□ -0.45
TNXB-202ENST00000442721 FAM149B1Q96BN6 582 aa12.27□□□□□ -0.45
TNXB-202ENST00000442721 BTN2A3PQ96KV6 586 aa12.27□□□□□ -0.45
TNXB-202ENST00000442721 NT5C1BQ96P26 610 aa12.27□□□□□ -0.45
TNXB-202ENST00000442721 PRMT1Q99873 361 aaKnown RBP12.27□□□□□ -0.45
TNXB-202ENST00000442721 RMND1Q9NWS8 449 aa12.27□□□□□ -0.45
TNXB-202ENST00000442721 TJP2Q9UDY2 1190 aa12.27□□□□□ -0.45
TNXB-202ENST00000442721 SARDHQ9UL12 918 aa12.27□□□□□ -0.45
TNXB-202ENST00000442721 CLCA2Q9UQC9 943 aa12.27□□□□□ -0.45
TNXB-202ENST00000442721 CEP83Q9Y592 693 aa12.27□□□□□ -0.45
TNXB-202ENST00000442721 ZNF462Q96JM2 2506 aa12.27□□□□□ -0.45
TNXB-202ENST00000442721 TEX51A0A1B0GUA7 166 aa12.26□□□□□ -0.45
TNXB-202ENST00000442721 TRIM49BA6NDI0 452 aa12.26□□□□□ -0.45
TNXB-202ENST00000442721 TRIM38O00635 465 aa12.26□□□□□ -0.45
TNXB-202ENST00000442721 MAGEC1O60732 1142 aa12.26□□□□□ -0.45
TNXB-202ENST00000442721 PLA2G2AP14555 144 aa12.26□□□□□ -0.45
TNXB-202ENST00000442721 PDGFRAP16234 1089 aa12.26□□□□□ -0.45
TNXB-202ENST00000442721 ACTN2P35609 894 aa12.26□□□□□ -0.45
TNXB-202ENST00000442721 NNMTP40261 264 aa12.26□□□□□ -0.45
TNXB-202ENST00000442721 ACADSBP45954 432 aa12.26□□□□□ -0.45
TNXB-202ENST00000442721 ZNF211Q13398 564 aaPredicted RBP12.26□□□□□ -0.45
TNXB-202ENST00000442721 MEA1Q16626 185 aa12.26□□□□□ -0.45
TNXB-202ENST00000442721 ZC3H12AQ5D1E8 599 aaKnown RBP12.26□□□□□ -0.45
TNXB-202ENST00000442721 CXorf57Q6NSI4 855 aaKnown RBP12.26□□□□□ -0.45
TNXB-202ENST00000442721 GPR155Q7Z3F1 870 aa12.26□□□□□ -0.45
TNXB-202ENST00000442721 PPM1KQ8N3J5 372 aa12.26□□□□□ -0.45
TNXB-202ENST00000442721 SPATA20Q8TB22 786 aa12.26□□□□□ -0.45
TNXB-202ENST00000442721 OR8D1Q8WZ84 308 aa12.26□□□□□ -0.45
TNXB-202ENST00000442721 RNF25Q96BH1 459 aaPredicted RBP12.26□□□□□ -0.45
TNXB-202ENST00000442721 TRIM62Q9BVG3 475 aa12.26□□□□□ -0.45
TNXB-202ENST00000442721 SLC4A5Q9BY07 1137 aa12.26□□□□□ -0.45
TNXB-202ENST00000442721 METTL14Q9HCE5 456 aaKnown RBP12.26□□□□□ -0.45
TNXB-202ENST00000442721 PPM1HQ9ULR3 514 aa12.26□□□□□ -0.45
TNXB-202ENST00000442721 CNTN6Q9UQ52 1028 aa12.26□□□□□ -0.45
TNXB-202ENST00000442721 ATMQ13315 3056 aa12.26□□□□□ -0.45
TNXB-202ENST00000442721 COL6A6A6NMZ7 2263 aa12.25□□□□□ -0.45
TNXB-202ENST00000442721 A0A1B0GVM2 712 aa12.25□□□□□ -0.45
TNXB-202ENST00000442721 TCAF2A6NFQ2 919 aa12.25□□□□□ -0.45
TNXB-202ENST00000442721 KCNU1A8MYU2 1149 aa12.25□□□□□ -0.45
TNXB-202ENST00000442721 F5H5T6 163 aa12.25□□□□□ -0.45
TNXB-202ENST00000442721 PRAMEF26H0Y7S4 382 aa12.25□□□□□ -0.45
TNXB-202ENST00000442721 ALOX15BO15296 676 aa12.25□□□□□ -0.45
TNXB-202ENST00000442721 SIGLEC6O43699 453 aa12.25□□□□□ -0.45
TNXB-202ENST00000442721 ATP9BO43861 1147 aa12.25□□□□□ -0.45
TNXB-202ENST00000442721 SDC3O75056 442 aa12.25□□□□□ -0.45
TNXB-202ENST00000442721 TRUB2O95900 331 aaKnown RBP12.25□□□□□ -0.45
TNXB-202ENST00000442721 MAT2AP31153 395 aaKnown RBP12.25□□□□□ -0.45
TNXB-202ENST00000442721 PITX1P78337 314 aaPredicted RBP12.25□□□□□ -0.45
TNXB-202ENST00000442721 E2F1Q01094 437 aa12.25□□□□□ -0.45
TNXB-202ENST00000442721 GCNT1Q02742 428 aa12.25□□□□□ -0.45
TNXB-202ENST00000442721 CNTN1Q12860 1018 aa12.25□□□□□ -0.45
TNXB-202ENST00000442721 TTC39BQ5VTQ0 682 aaPredicted RBP12.25□□□□□ -0.45
TNXB-202ENST00000442721 FAM46CQ5VWP2 391 aa12.25□□□□□ -0.45
TNXB-202ENST00000442721 DENND1BQ6P3S1 775 aa12.25□□□□□ -0.45
TNXB-202ENST00000442721 DSG4Q86SJ6 1040 aa12.25□□□□□ -0.45
TNXB-202ENST00000442721 CIR1Q86X95 450 aaPredicted RBP12.25□□□□□ -0.45
TNXB-202ENST00000442721 ARHGEF19Q8IW93 802 aa12.25□□□□□ -0.45
TNXB-202ENST00000442721 SPACA3Q8IXA5 215 aa12.25□□□□□ -0.45
TNXB-202ENST00000442721 CCAR2Q8N163 923 aaKnown RBP12.25□□□□□ -0.45
TNXB-202ENST00000442721 SLC25A45Q8N413 288 aa12.25□□□□□ -0.45
TNXB-202ENST00000442721 TMEM145Q8NBT3 493 aa12.25□□□□□ -0.45
TNXB-202ENST00000442721 STK32AQ8WU08 396 aa12.25□□□□□ -0.45
TNXB-202ENST00000442721 ALG14Q96F25 216 aa12.25□□□□□ -0.45
TNXB-202ENST00000442721 CCDC34Q96HJ3 373 aa12.25□□□□□ -0.45
TNXB-202ENST00000442721 GSDMAQ96QA5 445 aa12.25□□□□□ -0.45
TNXB-202ENST00000442721 SCAND2PQ9GZW5 306 aaPredicted RBP12.25□□□□□ -0.45
TNXB-202ENST00000442721 PREBQ9HCU5 417 aa12.25□□□□□ -0.45
TNXB-202ENST00000442721 FARP1Q9Y4F1 1045 aaPredicted RBP12.25□□□□□ -0.45
TNXB-202ENST00000442721 P4HA2O15460 535 aa12.24□□□□□ -0.45
TNXB-202ENST00000442721 RNGTTO60942 597 aaKnown RBP12.24□□□□□ -0.45
TNXB-202ENST00000442721 MT-CO3P00414 261 aa12.24□□□□□ -0.45
TNXB-202ENST00000442721 GIMD1P0DJR0 217 aa12.24□□□□□ -0.45
TNXB-202ENST00000442721 DGKAP23743 735 aa12.24□□□□□ -0.45
TNXB-202ENST00000442721 NUMBP49757 651 aa12.24□□□□□ -0.45
TNXB-202ENST00000442721 OXCT1P55809 520 aa12.24□□□□□ -0.45
TNXB-202ENST00000442721 TAS2R38P59533 333 aa12.24□□□□□ -0.45
TNXB-202ENST00000442721 CCDC173Q0VFZ6 552 aa12.24□□□□□ -0.45
TNXB-202ENST00000442721 STAT4Q14765 748 aa12.24□□□□□ -0.45
TNXB-202ENST00000442721 SETMARQ53H47 684 aaPredicted RBP12.24□□□□□ -0.45
TNXB-202ENST00000442721 CDCP2Q5VXM1 449 aa12.24□□□□□ -0.45
TNXB-202ENST00000442721 RRAGAQ7L523 313 aa12.24□□□□□ -0.45
TNXB-202ENST00000442721 TMEM110Q86TL2 294 aa12.24□□□□□ -0.45
TNXB-202ENST00000442721 FMR1NBQ8N0W7 255 aaPredicted RBP12.24□□□□□ -0.45
TNXB-202ENST00000442721 ATP6V0D2Q8N8Y2 350 aa12.24□□□□□ -0.45
TNXB-202ENST00000442721 OR52K2Q8NGK3 314 aa12.24□□□□□ -0.45
TNXB-202ENST00000442721 OR4C6Q8NH72 309 aa12.24□□□□□ -0.45
TNXB-202ENST00000442721 ERCC4Q92889 916 aaPredicted RBP12.24□□□□□ -0.45
TNXB-202ENST00000442721 HIC2Q96JB3 615 aa12.24□□□□□ -0.45
TNXB-202ENST00000442721 CEP63Q96MT8 703 aa12.24□□□□□ -0.45
TNXB-202ENST00000442721 KREMEN1Q96MU8 473 aa12.24□□□□□ -0.45
TNXB-202ENST00000442721 POPDC2Q9HBU9 364 aa12.24□□□□□ -0.45
TNXB-202ENST00000442721 ST7Q9NRC1 585 aa12.24□□□□□ -0.45
TNXB-202ENST00000442721 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms