RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 PCGF5Q86SE9 256 aa8.29□□□□□ -1.08
CCDC39-201ENST00000442201 LCA5Q86VQ0 697 aa8.29□□□□□ -1.08
CCDC39-201ENST00000442201 CCDC33Q8N5R6 958 aa8.29□□□□□ -1.08
CCDC39-201ENST00000442201 RTP4Q96DX8 246 aa8.29□□□□□ -1.08
CCDC39-201ENST00000442201 CORO1BQ9BR76 489 aa8.29□□□□□ -1.08
CCDC39-201ENST00000442201 PRDM12Q9H4Q4 367 aa8.29□□□□□ -1.08
CCDC39-201ENST00000442201 NOD2Q9HC29 1040 aa8.29□□□□□ -1.08
CCDC39-201ENST00000442201 PAK5Q9P286 719 aa8.29□□□□□ -1.08
CCDC39-201ENST00000442201 PLXNA3P51805 1871 aa8.29□□□□□ -1.08
CCDC39-201ENST00000442201 TP73O15350 636 aa8.28□□□□□ -1.08
CCDC39-201ENST00000442201 F11P03951 625 aa8.28□□□□□ -1.08
CCDC39-201ENST00000442201 HARS2P49590 506 aaKnown RBP8.28□□□□□ -1.08
CCDC39-201ENST00000442201 SESN3P58005 492 aa8.28□□□□□ -1.08
CCDC39-201ENST00000442201 LBRQ14739 615 aaKnown RBP8.28□□□□□ -1.08
CCDC39-201ENST00000442201 CMPK2Q5EBM0 449 aa8.28□□□□□ -1.08
CCDC39-201ENST00000442201 MS4A13Q5J8X5 152 aa8.28□□□□□ -1.08
CCDC39-201ENST00000442201 PPM1LQ5SGD2 360 aa8.28□□□□□ -1.08
CCDC39-201ENST00000442201 RHBDF2Q6PJF5 856 aa8.28□□□□□ -1.08
CCDC39-201ENST00000442201 TMC3Q7Z5M5 1100 aa8.28□□□□□ -1.08
CCDC39-201ENST00000442201 LZTR1Q8N653 840 aa8.28□□□□□ -1.08
CCDC39-201ENST00000442201 GBP7Q8N8V2 638 aaPredicted RBP8.28□□□□□ -1.08
CCDC39-201ENST00000442201 HTR3CQ8WXA8 447 aa8.28□□□□□ -1.08
CCDC39-201ENST00000442201 STAMBPL1Q96FJ0 436 aa8.28□□□□□ -1.08
CCDC39-201ENST00000442201 LGMNQ99538 433 aa8.28□□□□□ -1.08
CCDC39-201ENST00000442201 EPN3Q9H201 632 aa8.28□□□□□ -1.08
CCDC39-201ENST00000442201 ZNF334Q9HCZ1 680 aaPredicted RBP8.28□□□□□ -1.08
CCDC39-201ENST00000442201 VANGL2Q9ULK5 521 aa8.28□□□□□ -1.08
CCDC39-201ENST00000442201 TMCO1Q9UM00 188 aa8.28□□□□□ -1.08
CCDC39-201ENST00000442201 STK10O94804 968 aaKnown RBP8.28□□□□□ -1.08
CCDC39-201ENST00000442201 OAS1P00973 400 aaKnown RBP8.28□□□□□ -1.08
CCDC39-201ENST00000442201 IDO1P14902 403 aa8.28□□□□□ -1.08
CCDC39-201ENST00000442201 GABRR2P28476 465 aa8.28□□□□□ -1.08
CCDC39-201ENST00000442201 ALDH3A1P30838 453 aa8.28□□□□□ -1.08
CCDC39-201ENST00000442201 IRS1P35568 1242 aa8.28□□□□□ -1.08
CCDC39-201ENST00000442201 ABL2P42684 1182 aa8.28□□□□□ -1.08
CCDC39-201ENST00000442201 KCNQ1P51787 676 aa8.28□□□□□ -1.08
CCDC39-201ENST00000442201 ERVK-21P61565 698 aa8.28□□□□□ -1.08
CCDC39-201ENST00000442201 AP1B1Q10567 949 aa8.28□□□□□ -1.08
CCDC39-201ENST00000442201 AUHQ13825 339 aaKnown RBP8.28□□□□□ -1.08
CCDC39-201ENST00000442201 MORF4L2Q15014 288 aa8.28□□□□□ -1.08
CCDC39-201ENST00000442201 COL13A1Q5TAT6 717 aaPredicted RBP8.28□□□□□ -1.08
CCDC39-201ENST00000442201 PDE12Q6L8Q7 609 aaKnown RBP8.28□□□□□ -1.08
CCDC39-201ENST00000442201 HIBCHQ6NVY1 386 aaPredicted RBP8.28□□□□□ -1.08
CCDC39-201ENST00000442201 C4orf22Q6V702 233 aa8.28□□□□□ -1.08
CCDC39-201ENST00000442201 RTL10Q7L3V2 364 aa8.28□□□□□ -1.08
CCDC39-201ENST00000442201 C14orf80Q86SX3 495 aa8.28□□□□□ -1.08
CCDC39-201ENST00000442201 CHSY1Q86X52 802 aa8.28□□□□□ -1.08
CCDC39-201ENST00000442201 NPWQ8N729 165 aa8.28□□□□□ -1.08
CCDC39-201ENST00000442201 LRRN4Q8WUT4 740 aa8.28□□□□□ -1.08
CCDC39-201ENST00000442201 MRPS31Q92665 395 aaKnown RBP8.28□□□□□ -1.08
CCDC39-201ENST00000442201 PPP1R14BQ96C90 147 aa8.28□□□□□ -1.08
CCDC39-201ENST00000442201 FOXP3Q9BZS1 431 aa8.28□□□□□ -1.08
CCDC39-201ENST00000442201 ADAM7Q9H2U9 754 aa8.28□□□□□ -1.08
CCDC39-201ENST00000442201 CENPHQ9H3R5 247 aa8.28□□□□□ -1.08
CCDC39-201ENST00000442201 IL21Q9HBE4 155 aa8.28□□□□□ -1.08
CCDC39-201ENST00000442201 ATXN10Q9UBB4 475 aa8.28□□□□□ -1.08
CCDC39-201ENST00000442201 SHOC2Q9UQ13 582 aa8.28□□□□□ -1.08
CCDC39-201ENST00000442201 NEU3Q9UQ49 428 aa8.28□□□□□ -1.08
CCDC39-201ENST00000442201 C2orf78A6NCI8 922 aa8.28□□□□□ -1.08
CCDC39-201ENST00000442201 C1RP00736 705 aa8.28□□□□□ -1.08
CCDC39-201ENST00000442201 SLC11A2P49281 568 aa8.28□□□□□ -1.08
CCDC39-201ENST00000442201 CLCN4P51793 760 aa8.28□□□□□ -1.08
CCDC39-201ENST00000442201 NRLP54845 237 aa8.28□□□□□ -1.08
CCDC39-201ENST00000442201 GPM6BQ13491 265 aa8.28□□□□□ -1.08
CCDC39-201ENST00000442201 CAMK1Q14012 370 aa8.28□□□□□ -1.08
CCDC39-201ENST00000442201 PRKD1Q15139 912 aaPredicted RBP8.28□□□□□ -1.08
CCDC39-201ENST00000442201 PUS10Q3MIT2 529 aaKnown RBP8.28□□□□□ -1.08
CCDC39-201ENST00000442201 CFAP58Q5T655 872 aa8.28□□□□□ -1.08
CCDC39-201ENST00000442201 RAP1GAP2Q684P5 730 aa8.28□□□□□ -1.08
CCDC39-201ENST00000442201 TMEM150AQ86TG1 271 aa8.28□□□□□ -1.08
CCDC39-201ENST00000442201 CCDC25Q86WR0 208 aa8.28□□□□□ -1.08
CCDC39-201ENST00000442201 RTL3Q8N8U3 475 aaKnown RBP8.28□□□□□ -1.08
CCDC39-201ENST00000442201 NETO2Q8NC67 525 aa8.28□□□□□ -1.08
CCDC39-201ENST00000442201 TSEN2Q8NCE0 465 aaKnown RBP8.28□□□□□ -1.08
CCDC39-201ENST00000442201 PLD4Q96BZ4 506 aa8.28□□□□□ -1.08
CCDC39-201ENST00000442201 GCNAQ96QF7 691 aa8.28□□□□□ -1.08
CCDC39-201ENST00000442201 ZYG11BQ9C0D3 744 aa8.28□□□□□ -1.08
CCDC39-201ENST00000442201 TRPC7Q9HCX4 862 aa8.28□□□□□ -1.08
CCDC39-201ENST00000442201 CLUHO75153 1309 aa8.28□□□□□ -1.08
CCDC39-201ENST00000442201 KIAA1671Q9BY89 1806 aa8.27□□□□□ -1.08
CCDC39-201ENST00000442201 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.27□□□□□ -1.09
CCDC39-201ENST00000442201 C5orf60A6NFR6 353 aa8.27□□□□□ -1.09
CCDC39-201ENST00000442201 GCATO75600 419 aa8.27□□□□□ -1.09
CCDC39-201ENST00000442201 RHOQP17081 205 aa8.27□□□□□ -1.09
CCDC39-201ENST00000442201 ELF3P78545 371 aaPredicted RBP8.27□□□□□ -1.09
CCDC39-201ENST00000442201 BASP1P80723 227 aaKnown RBP8.27□□□□□ -1.09
CCDC39-201ENST00000442201 GALNT2Q10471 571 aa8.27□□□□□ -1.09
CCDC39-201ENST00000442201 RNASEH2BQ5TBB1 312 aaKnown RBP8.27□□□□□ -1.09
CCDC39-201ENST00000442201 CEP128Q6ZU80 1094 aa8.27□□□□□ -1.09
CCDC39-201ENST00000442201 TP53INP2Q8IXH6 220 aa8.27□□□□□ -1.09
CCDC39-201ENST00000442201 PPIL6Q8IXY8 311 aa8.27□□□□□ -1.09
CCDC39-201ENST00000442201 TAB3Q8N5C8 712 aaPredicted RBP8.27□□□□□ -1.09
CCDC39-201ENST00000442201 CCDC110Q8TBZ0 833 aa8.27□□□□□ -1.09
CCDC39-201ENST00000442201 ZNF473Q8WTR7 871 aaKnown RBP8.27□□□□□ -1.09
CCDC39-201ENST00000442201 HDAC11Q96DB2 347 aa8.27□□□□□ -1.09
CCDC39-201ENST00000442201 P2RY11Q96G91 374 aa8.27□□□□□ -1.09
CCDC39-201ENST00000442201 RPRD1AQ96P16 312 aaPredicted RBP8.27□□□□□ -1.09
CCDC39-201ENST00000442201 RNF38Q9H0F5 515 aa8.27□□□□□ -1.09
CCDC39-201ENST00000442201 RAB6BQ9NRW1 208 aa8.27□□□□□ -1.09
CCDC39-201ENST00000442201 MPP6Q9NZW5 540 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms