RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 SPATA2LQ8IUW3 424 aaPredicted RBP9.37□□□□□ -0.91
HDAC6-209ENST00000440653 LZTR1Q8N653 840 aa9.37□□□□□ -0.91
HDAC6-209ENST00000440653 RNF169Q8NCN4 708 aa9.37□□□□□ -0.91
HDAC6-209ENST00000440653 GDAP1Q8TB36 358 aa9.37□□□□□ -0.91
HDAC6-209ENST00000440653 RAB3IL1Q8TBN0 382 aa9.37□□□□□ -0.91
HDAC6-209ENST00000440653 SP7Q8TDD2 431 aaPredicted RBP9.37□□□□□ -0.91
HDAC6-209ENST00000440653 DENND1AQ8TEH3 1009 aa9.37□□□□□ -0.91
HDAC6-209ENST00000440653 STAMBPL1Q96FJ0 436 aa9.37□□□□□ -0.91
HDAC6-209ENST00000440653 CFAP36Q96G28 342 aa9.37□□□□□ -0.91
HDAC6-209ENST00000440653 RTP3Q9BQQ7 232 aa9.37□□□□□ -0.91
HDAC6-209ENST00000440653 OXCT2Q9BYC2 517 aaPredicted RBP9.37□□□□□ -0.91
HDAC6-209ENST00000440653 OSBPL2Q9H1P3 480 aa9.37□□□□□ -0.91
HDAC6-209ENST00000440653 GBA3Q9H227 469 aa9.37□□□□□ -0.91
HDAC6-209ENST00000440653 ELAC1Q9H777 363 aaKnown RBP9.37□□□□□ -0.91
HDAC6-209ENST00000440653 C10orf88Q9H8K7 445 aa9.37□□□□□ -0.91
HDAC6-209ENST00000440653 ABCC13Q9NSE7 274 aa9.37□□□□□ -0.91
HDAC6-209ENST00000440653 FGFR1OP2Q9NVK5 253 aa9.37□□□□□ -0.91
HDAC6-209ENST00000440653 HAUS2Q9NVX0 235 aa9.37□□□□□ -0.91
HDAC6-209ENST00000440653 DONSONQ9NYP3 566 aa9.37□□□□□ -0.91
HDAC6-209ENST00000440653 KLHL14Q9P2G3 628 aa9.37□□□□□ -0.91
HDAC6-209ENST00000440653 STARD13Q9Y3M8 1113 aa9.37□□□□□ -0.91
HDAC6-209ENST00000440653 R4GN57 208 aa9.37□□□□□ -0.91
HDAC6-209ENST00000440653 FRYQ5TBA9 3013 aa9.37□□□□□ -0.91
HDAC6-209ENST00000440653 VWA8A3KMH1 1905 aa9.37□□□□□ -0.91
HDAC6-209ENST00000440653 ZZEF1O43149 2961 aa9.36□□□□□ -0.91
HDAC6-209ENST00000440653 CFAP73A6NFT4 308 aa9.36□□□□□ -0.91
HDAC6-209ENST00000440653 CCT8L1PA6NM43 557 aa9.36□□□□□ -0.91
HDAC6-209ENST00000440653 NRP1O14786 923 aa9.36□□□□□ -0.91
HDAC6-209ENST00000440653 GRM6O15303 877 aa9.36□□□□□ -0.91
HDAC6-209ENST00000440653 PSMD3O43242 534 aa9.36□□□□□ -0.91
HDAC6-209ENST00000440653 PI15O43692 258 aa9.36□□□□□ -0.91
HDAC6-209ENST00000440653 CREB3O43889 395 aa9.36□□□□□ -0.91
HDAC6-209ENST00000440653 NBNO60934 754 aa9.36□□□□□ -0.91
HDAC6-209ENST00000440653 BANF1O75531 89 aa9.36□□□□□ -0.91
HDAC6-209ENST00000440653 DCTN3O75935 186 aa9.36□□□□□ -0.91
HDAC6-209ENST00000440653 DNAJC8O75937 253 aaPredicted RBP9.36□□□□□ -0.91
HDAC6-209ENST00000440653 POMCP01189 267 aa9.36□□□□□ -0.91
HDAC6-209ENST00000440653 SNRPAP09012 282 aaKnown RBP9.36□□□□□ -0.91
HDAC6-209ENST00000440653 USP17L7P0C7H9 530 aa9.36□□□□□ -0.91
HDAC6-209ENST00000440653 TROVE2P10155 538 aaKnown RBP eCLIP9.36□□□□□ -0.91
HDAC6-209ENST00000440653 SLC2A3P11169 496 aa9.36□□□□□ -0.91
HDAC6-209ENST00000440653 CKBP12277 381 aa9.36□□□□□ -0.91
HDAC6-209ENST00000440653 KRT4P19013 534 aa9.36□□□□□ -0.91
HDAC6-209ENST00000440653 MAGEA11P43364 429 aa9.36□□□□□ -0.91
HDAC6-209ENST00000440653 NDUFV1P49821 464 aa9.36□□□□□ -0.91
HDAC6-209ENST00000440653 HTRA4P83105 476 aaPredicted RBP9.36□□□□□ -0.91
HDAC6-209ENST00000440653 GAD2Q05329 585 aa9.36□□□□□ -0.91
HDAC6-209ENST00000440653 SLC18A2Q05940 514 aa9.36□□□□□ -0.91
HDAC6-209ENST00000440653 AP1B1Q10567 949 aa9.36□□□□□ -0.91
HDAC6-209ENST00000440653 SMARCB1Q12824 385 aa9.36□□□□□ -0.91
HDAC6-209ENST00000440653 IFRD2Q12894 506 aaPredicted RBP9.36□□□□□ -0.91
HDAC6-209ENST00000440653 SLC10A2Q12908 348 aaPredicted RBP9.36□□□□□ -0.91
HDAC6-209ENST00000440653 ELAVL2Q12926 359 aaKnown RBP9.36□□□□□ -0.91
HDAC6-209ENST00000440653 BFSP2Q13515 415 aa9.36□□□□□ -0.91
HDAC6-209ENST00000440653 PPP2R5DQ14738 602 aa9.36□□□□□ -0.91
HDAC6-209ENST00000440653 EFTUD2Q15029 972 aaKnown RBP eCLIP9.36□□□□□ -0.915e-7■■■■■ 27.1
HDAC6-209ENST00000440653 ANGPT1Q15389 498 aa9.36□□□□□ -0.91
HDAC6-209ENST00000440653 NOMO2Q5JPE7 1267 aa9.36□□□□□ -0.91
HDAC6-209ENST00000440653 RNF43Q68DV7 783 aa9.36□□□□□ -0.91
HDAC6-209ENST00000440653 ZNF280DQ6N043 979 aa9.36□□□□□ -0.91
HDAC6-209ENST00000440653 DENND5BQ6ZUT9 1274 aa9.36□□□□□ -0.91
HDAC6-209ENST00000440653 GPRIN1Q7Z2K8 1008 aa9.36□□□□□ -0.91
HDAC6-209ENST00000440653 TRPM8Q7Z2W7 1104 aa9.36□□□□□ -0.91
HDAC6-209ENST00000440653 TAC4Q86UU9 113 aa9.36□□□□□ -0.91
HDAC6-209ENST00000440653 LRRC49Q8IUZ0 686 aa9.36□□□□□ -0.91
HDAC6-209ENST00000440653 C10orf67Q8IYJ2 551 aa9.36□□□□□ -0.91
HDAC6-209ENST00000440653 C4orf33Q8N1A6 199 aa9.36□□□□□ -0.91
HDAC6-209ENST00000440653 CRIPAKQ8N1N5 446 aa9.36□□□□□ -0.91
HDAC6-209ENST00000440653 BANPQ8N9N5 519 aa9.36□□□□□ -0.91
HDAC6-209ENST00000440653 SMRP1Q8NCR6 262 aa9.36□□□□□ -0.91
HDAC6-209ENST00000440653 ACMSDQ8TDX5 336 aa9.36□□□□□ -0.91
HDAC6-209ENST00000440653 DQX1Q8TE96 717 aaKnown RBP9.36□□□□□ -0.91
HDAC6-209ENST00000440653 CCT6BQ92526 530 aa9.36□□□□□ -0.91
HDAC6-209ENST00000440653 TTC17Q96AE7 1141 aa9.36□□□□□ -0.91
HDAC6-209ENST00000440653 P2RY11Q96G91 374 aa9.36□□□□□ -0.91
HDAC6-209ENST00000440653 SERPINB11Q96P15 392 aa9.36□□□□□ -0.91
HDAC6-209ENST00000440653 HAPLN3Q96S86 360 aa9.36□□□□□ -0.91
HDAC6-209ENST00000440653 COLEC11Q9BWP8 271 aa9.36□□□□□ -0.91
HDAC6-209ENST00000440653 PHF7Q9BWX1 381 aaPredicted RBP9.36□□□□□ -0.91
HDAC6-209ENST00000440653 MRPL9Q9BYD2 267 aaKnown RBP9.36□□□□□ -0.91
HDAC6-209ENST00000440653 VPS11Q9H270 941 aa9.36□□□□□ -0.91
HDAC6-209ENST00000440653 FBXO44Q9H4M3 255 aa9.36□□□□□ -0.91
HDAC6-209ENST00000440653 CATSPERBQ9H7T0 1116 aa9.36□□□□□ -0.91
HDAC6-209ENST00000440653 RNF19AQ9NV58 838 aa9.36□□□□□ -0.91
HDAC6-209ENST00000440653 TMEM161AQ9NX61 479 aa9.36□□□□□ -0.91
HDAC6-209ENST00000440653 MIOSQ9NXC5 875 aa9.36□□□□□ -0.91
HDAC6-209ENST00000440653 ARHGEF38Q9NXL2 777 aa9.36□□□□□ -0.91
HDAC6-209ENST00000440653 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.36□□□□□ -0.91
HDAC6-209ENST00000440653 KLHL8Q9P2G9 620 aaPredicted RBP9.36□□□□□ -0.91
HDAC6-209ENST00000440653 SLC12A4Q9UP95 1085 aa9.36□□□□□ -0.91
HDAC6-209ENST00000440653 INPP5FQ9Y2H2 1132 aa9.36□□□□□ -0.91
HDAC6-209ENST00000440653 UNC79Q9P2D8 2635 aa9.36□□□□□ -0.91
HDAC6-209ENST00000440653 SHROOM3Q8TF72 1996 aa9.35□□□□□ -0.91
HDAC6-209ENST00000440653 MYO10Q9HD67 2058 aa9.35□□□□□ -0.91
HDAC6-209ENST00000440653 SYNJ2BP-COX16A0A087WUM0 186 aa9.35□□□□□ -0.91
HDAC6-209ENST00000440653 ABHD14A-ACY1A0A1B0GW23 586 aa9.35□□□□□ -0.91
HDAC6-209ENST00000440653 SDR42E2A6NKP2 422 aa9.35□□□□□ -0.91
HDAC6-209ENST00000440653 OR6C75A6NL08 312 aa9.35□□□□□ -0.91
HDAC6-209ENST00000440653 KLF11O14901 512 aa9.35□□□□□ -0.91
HDAC6-209ENST00000440653 ALDH1A2O94788 518 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms