RNA–Protein interactions for RNA: ENST00000440437.1

COL16A1-204, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-204ENST00000440437 CLDN11O75508 207 aa17.29■□□□□ 0.36
COL16A1-204ENST00000440437 LSM8O95777 96 aaKnown RBP17.29■□□□□ 0.36
COL16A1-204ENST00000440437 MMEP08473 750 aa17.29■□□□□ 0.36
COL16A1-204ENST00000440437 C5AR1P21730 350 aa17.29■□□□□ 0.36
COL16A1-204ENST00000440437 DRD3P35462 400 aa17.29■□□□□ 0.36
COL16A1-204ENST00000440437 FLT3P36888 993 aa17.29■□□□□ 0.36
COL16A1-204ENST00000440437 CDH4P55283 916 aa17.29■□□□□ 0.36
COL16A1-204ENST00000440437 NOMO3P69849 1222 aa17.29■□□□□ 0.36
COL16A1-204ENST00000440437 KCNT1Q5JUK3 1230 aa17.29■□□□□ 0.36
COL16A1-204ENST00000440437 ARTNQ5T4W7 220 aa17.29■□□□□ 0.36
COL16A1-204ENST00000440437 FAM102AQ5T9C2 384 aaPredicted RBP17.29■□□□□ 0.36
COL16A1-204ENST00000440437 TRNP1Q6NT89 227 aa17.29■□□□□ 0.36
COL16A1-204ENST00000440437 SND1Q7KZF4 910 aaKnown RBP eCLIP17.29■□□□□ 0.36
COL16A1-204ENST00000440437 BNIPLQ7Z465 357 aa17.29■□□□□ 0.36
COL16A1-204ENST00000440437 OR2T34Q8NGX1 318 aa17.29■□□□□ 0.36
COL16A1-204ENST00000440437 SPAG5Q96R06 1193 aa17.29■□□□□ 0.36
COL16A1-204ENST00000440437 TBCBQ99426 244 aa17.29■□□□□ 0.36
COL16A1-204ENST00000440437 OMDQ99983 421 aa17.29■□□□□ 0.36
COL16A1-204ENST00000440437 TKTL2Q9H0I9 626 aa17.29■□□□□ 0.36
COL16A1-204ENST00000440437 SIK2Q9H0K1 926 aa17.29■□□□□ 0.36
COL16A1-204ENST00000440437 WDCPQ9H6R7 721 aa17.29■□□□□ 0.36
COL16A1-204ENST00000440437 SLC25A13Q9UJS0 675 aa17.29■□□□□ 0.36
COL16A1-204ENST00000440437 MSRB2Q9Y3D2 182 aa17.29■□□□□ 0.36
COL16A1-204ENST00000440437 CHD5Q8TDI0 1954 aa17.29■□□□□ 0.36
COL16A1-204ENST00000440437 KNL1Q8NG31 2342 aa17.29■□□□□ 0.36
COL16A1-204ENST00000440437 COL5A1P20908 1838 aaPredicted RBP17.28■□□□□ 0.36
COL16A1-204ENST00000440437 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.28■□□□□ 0.36
COL16A1-204ENST00000440437 FAM170AA1A519 330 aa17.28■□□□□ 0.36
COL16A1-204ENST00000440437 FAM221BA6H8Z2 402 aa17.28■□□□□ 0.36
COL16A1-204ENST00000440437 FAM47DPA6NHR8 397 aa17.28■□□□□ 0.36
COL16A1-204ENST00000440437 LRRC72A6NJI9 287 aa17.28■□□□□ 0.36
COL16A1-204ENST00000440437 FLRT2O43155 660 aa17.28■□□□□ 0.36
COL16A1-204ENST00000440437 CNTN5O94779 1100 aa17.28■□□□□ 0.36
COL16A1-204ENST00000440437 FTH1P19P0C7X4 201 aa17.28■□□□□ 0.36
COL16A1-204ENST00000440437 GOT1P17174 413 aa17.28■□□□□ 0.36
COL16A1-204ENST00000440437 CTSKP43235 329 aa17.28■□□□□ 0.36
COL16A1-204ENST00000440437 METAP1P53582 386 aa17.28■□□□□ 0.36
COL16A1-204ENST00000440437 ADPRHP54922 357 aa17.28■□□□□ 0.36
COL16A1-204ENST00000440437 RNASE9P60153 205 aaKnown RBP17.28■□□□□ 0.36
COL16A1-204ENST00000440437 RACK1P63244 317 aaKnown RBP17.28■□□□□ 0.36
COL16A1-204ENST00000440437 DEUP1Q05D60 604 aa17.28■□□□□ 0.36
COL16A1-204ENST00000440437 ZNF177Q13360 481 aaPredicted RBP17.28■□□□□ 0.36
COL16A1-204ENST00000440437 KRT31Q15323 416 aa17.28■□□□□ 0.36
COL16A1-204ENST00000440437 SLC25A52Q3SY17 297 aa17.28■□□□□ 0.36
COL16A1-204ENST00000440437 ALFQ53S48 1182 aa17.28■□□□□ 0.36
COL16A1-204ENST00000440437 C2CD6Q53TS8 623 aa17.28■□□□□ 0.36
COL16A1-204ENST00000440437 ERICH1Q86X53 443 aa17.28■□□□□ 0.36
COL16A1-204ENST00000440437 CHCHD4Q8N4Q1 142 aa17.28■□□□□ 0.36
COL16A1-204ENST00000440437 KDF1Q8NAX2 398 aaPredicted RBP17.28■□□□□ 0.36
COL16A1-204ENST00000440437 GPT2Q8TD30 523 aa17.28■□□□□ 0.36
COL16A1-204ENST00000440437 SLC6A18Q96N87 628 aa17.28■□□□□ 0.36
COL16A1-204ENST00000440437 PPP1R9BQ96SB3 815 aa17.28■□□□□ 0.36
COL16A1-204ENST00000440437 PSMB7Q99436 277 aa17.28■□□□□ 0.36
COL16A1-204ENST00000440437 TMEM59LQ9UK28 342 aa17.28■□□□□ 0.36
COL16A1-204ENST00000440437 NOCTQ9UK39 431 aaKnown RBP17.28■□□□□ 0.36
COL16A1-204ENST00000440437 PCDHB9Q9Y5E1 797 aa17.28■□□□□ 0.36
COL16A1-204ENST00000440437 CABIN1Q9Y6J0 2220 aa17.28■□□□□ 0.36
COL16A1-204ENST00000440437 F9P00740 461 aa17.27■□□□□ 0.36
COL16A1-204ENST00000440437 IL1BP01584 269 aa17.27■□□□□ 0.36
COL16A1-204ENST00000440437 RDXP35241 583 aaKnown RBP17.27■□□□□ 0.36
COL16A1-204ENST00000440437 ANP32AP39687 249 aaKnown RBP17.27■□□□□ 0.36
COL16A1-204ENST00000440437 KLK7P49862 253 aa17.27■□□□□ 0.36
COL16A1-204ENST00000440437 CCR5P51681 352 aa17.27■□□□□ 0.36
COL16A1-204ENST00000440437 ARCQ7LC44 396 aa17.27■□□□□ 0.36
COL16A1-204ENST00000440437 ZNF677Q86XU0 584 aa17.27■□□□□ 0.36
COL16A1-204ENST00000440437 SH2D3CQ8N5H7 860 aa17.27■□□□□ 0.36
COL16A1-204ENST00000440437 SLC20A1Q8WUM9 679 aa17.27■□□□□ 0.36
COL16A1-204ENST00000440437 ADAMTS14Q8WXS8 1223 aa17.27■□□□□ 0.36
COL16A1-204ENST00000440437 VPS16Q9H269 839 aa17.27■□□□□ 0.36
COL16A1-204ENST00000440437 TMPRSS4Q9NRS4 437 aa17.27■□□□□ 0.36
COL16A1-204ENST00000440437 TMEM51Q9NW97 253 aa17.27■□□□□ 0.36
COL16A1-204ENST00000440437 VPS28Q9UK41 221 aa17.27■□□□□ 0.36
COL16A1-204ENST00000440437 SARDHQ9UL12 918 aa17.27■□□□□ 0.36
COL16A1-204ENST00000440437 SNX10Q9Y5X0 201 aa17.27■□□□□ 0.36
COL16A1-204ENST00000440437 ZFHX4Q86UP3 3567 aa17.27■□□□□ 0.35
COL16A1-204ENST00000440437 IGLV3-10A0A075B6K4 115 aa17.26■□□□□ 0.35
COL16A1-204ENST00000440437 TMEM8BA6NDV4 472 aa17.26■□□□□ 0.35
COL16A1-204ENST00000440437 DRGXA6NNA5 263 aa17.26■□□□□ 0.35
COL16A1-204ENST00000440437 H0Y8X5 98 aa17.26■□□□□ 0.35
COL16A1-204ENST00000440437 VILLO15195 856 aa17.26■□□□□ 0.35
COL16A1-204ENST00000440437 EPHB6O15197 1021 aa17.26■□□□□ 0.35
COL16A1-204ENST00000440437 ALOX15BO15296 676 aa17.26■□□□□ 0.35
COL16A1-204ENST00000440437 WNT1P04628 370 aa17.26■□□□□ 0.35
COL16A1-204ENST00000440437 CYP1A1P04798 512 aaPredicted RBP17.26■□□□□ 0.35
COL16A1-204ENST00000440437 CCT8P50990 548 aa17.26■□□□□ 0.35
COL16A1-204ENST00000440437 JAM2P57087 298 aa17.26■□□□□ 0.35
COL16A1-204ENST00000440437 NAA35Q5VZE5 725 aa17.26■□□□□ 0.35
COL16A1-204ENST00000440437 Q6ZVU0 165 aa17.26■□□□□ 0.35
COL16A1-204ENST00000440437 ADAT2Q7Z6V5 191 aaKnown RBP17.26■□□□□ 0.35
COL16A1-204ENST00000440437 MSANTD4Q8NCY6 345 aa17.26■□□□□ 0.35
COL16A1-204ENST00000440437 OR14C36Q8NHC7 312 aa17.26■□□□□ 0.35
COL16A1-204ENST00000440437 SETD7Q8WTS6 366 aaKnown RBP17.26■□□□□ 0.35
COL16A1-204ENST00000440437 CPA5Q8WXQ8 436 aa17.26■□□□□ 0.35
COL16A1-204ENST00000440437 OR8D1Q8WZ84 308 aa17.26■□□□□ 0.35
COL16A1-204ENST00000440437 C1orf74Q96LT6 269 aa17.26■□□□□ 0.35
COL16A1-204ENST00000440437 TOR4AQ9NXH8 423 aa17.26■□□□□ 0.35
COL16A1-204ENST00000440437 ZMIZ1Q9ULJ6 1067 aa17.26■□□□□ 0.35
COL16A1-204ENST00000440437 TPX2Q9ULW0 747 aaKnown RBP17.26■□□□□ 0.35
COL16A1-204ENST00000440437 HS3ST2Q9Y278 367 aa17.26■□□□□ 0.35
COL16A1-204ENST00000440437 BTBD3Q9Y2F9 522 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms