RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 CAVIN1Q6NZI2 390 aaKnown RBP20.4■□□□□ 0.86
SHROOM1-204ENST00000440118 TFAP2DQ7Z6R9 452 aa20.4■□□□□ 0.86
SHROOM1-204ENST00000440118 OR8D1Q8WZ84 308 aa20.4■□□□□ 0.86
SHROOM1-204ENST00000440118 NT5C3BQ969T7 300 aa20.4■□□□□ 0.86
SHROOM1-204ENST00000440118 BIRC7Q96CA5 298 aa20.4■□□□□ 0.86
SHROOM1-204ENST00000440118 C2orf49Q9BVC5 232 aaPredicted RBP20.4■□□□□ 0.86
SHROOM1-204ENST00000440118 ADAM33Q9BZ11 813 aa20.4■□□□□ 0.86
SHROOM1-204ENST00000440118 DNAAF2Q9NVR5 837 aaKnown RBP20.4■□□□□ 0.86
SHROOM1-204ENST00000440118 TMEM63CQ9P1W3 806 aa20.4■□□□□ 0.86
SHROOM1-204ENST00000440118 TMEM131Q92545 1883 aa20.39■□□□□ 0.86
SHROOM1-204ENST00000440118 CEP295Q9C0D2 2601 aa20.39■□□□□ 0.85
SHROOM1-204ENST00000440118 E9PAM4 449 aa20.39■□□□□ 0.85
SHROOM1-204ENST00000440118 CNTN5O94779 1100 aa20.39■□□□□ 0.85
SHROOM1-204ENST00000440118 CCDC172P0C7W6 258 aa20.39■□□□□ 0.85
SHROOM1-204ENST00000440118 VAV1P15498 845 aa20.39■□□□□ 0.85
SHROOM1-204ENST00000440118 C5AR1P21730 350 aa20.39■□□□□ 0.85
SHROOM1-204ENST00000440118 MMP8P22894 467 aa20.39■□□□□ 0.85
SHROOM1-204ENST00000440118 PMLP29590 882 aa20.39■□□□□ 0.85
SHROOM1-204ENST00000440118 OR1E1P30953 314 aa20.39■□□□□ 0.85
SHROOM1-204ENST00000440118 SEMA3BQ13214 749 aa20.39■□□□□ 0.85
SHROOM1-204ENST00000440118 ALFQ53S48 1182 aa20.39■□□□□ 0.85
SHROOM1-204ENST00000440118 KIAA0895LQ68EN5 471 aa20.39■□□□□ 0.85
SHROOM1-204ENST00000440118 PTPRN2Q92932 1015 aa20.39■□□□□ 0.85
SHROOM1-204ENST00000440118 CCDC114Q96M63 670 aa20.39■□□□□ 0.85
SHROOM1-204ENST00000440118 ERGIC2Q96RQ1 377 aa20.39■□□□□ 0.85
SHROOM1-204ENST00000440118 SELENOOQ9BVL4 669 aa20.39■□□□□ 0.85
SHROOM1-204ENST00000440118 ANLNQ9NQW6 1124 aa20.39■□□□□ 0.85
SHROOM1-204ENST00000440118 TMPRSS4Q9NRS4 437 aa20.39■□□□□ 0.85
SHROOM1-204ENST00000440118 MPP6Q9NZW5 540 aa20.39■□□□□ 0.85
SHROOM1-204ENST00000440118 ADAM22Q9P0K1 906 aa20.39■□□□□ 0.85
SHROOM1-204ENST00000440118 SERGEFQ9UGK8 458 aa20.39■□□□□ 0.85
SHROOM1-204ENST00000440118 TMEM59LQ9UK28 342 aa20.39■□□□□ 0.85
SHROOM1-204ENST00000440118 FZD4Q9ULV1 537 aa20.39■□□□□ 0.85
SHROOM1-204ENST00000440118 PCDHB9Q9Y5E1 797 aa20.39■□□□□ 0.85
SHROOM1-204ENST00000440118 PCNX2A6NKB5 2137 aa20.39■□□□□ 0.85
SHROOM1-204ENST00000440118 ANKRD62A6NC57 917 aa20.38■□□□□ 0.85
SHROOM1-204ENST00000440118 C1QTNF3-AMACRE9PGA6 284 aa20.38■□□□□ 0.85
SHROOM1-204ENST00000440118 CALB1P05937 261 aa20.38■□□□□ 0.85
SHROOM1-204ENST00000440118 ATP1A3P13637 1013 aa20.38■□□□□ 0.85
SHROOM1-204ENST00000440118 CHRNB2P17787 502 aa20.38■□□□□ 0.85
SHROOM1-204ENST00000440118 CD27P26842 260 aa20.38■□□□□ 0.85
SHROOM1-204ENST00000440118 CSNK1EP49674 416 aaKnown RBP20.38■□□□□ 0.85
SHROOM1-204ENST00000440118 SIM1P81133 766 aaPredicted RBP20.38■□□□□ 0.85
SHROOM1-204ENST00000440118 NCAPHQ15003 741 aa20.38■□□□□ 0.85
SHROOM1-204ENST00000440118 FAM46CQ5VWP2 391 aa20.38■□□□□ 0.85
SHROOM1-204ENST00000440118 NCEH1Q6PIU2 408 aa20.38■□□□□ 0.85
SHROOM1-204ENST00000440118 ARCQ7LC44 396 aa20.38■□□□□ 0.85
SHROOM1-204ENST00000440118 ATP11CQ8NB49 1132 aa20.38■□□□□ 0.85
SHROOM1-204ENST00000440118 OR14C36Q8NHC7 312 aa20.38■□□□□ 0.85
SHROOM1-204ENST00000440118 HAPLN3Q96S86 360 aa20.38■□□□□ 0.85
SHROOM1-204ENST00000440118 NEUROG2Q9H2A3 272 aa20.38■□□□□ 0.85
SHROOM1-204ENST00000440118 GAREM1Q9H706 876 aa20.38■□□□□ 0.85
SHROOM1-204ENST00000440118 TBC1D30Q9Y2I9 924 aa20.38■□□□□ 0.85
SHROOM1-204ENST00000440118 FARP1Q9Y4F1 1045 aaPredicted RBP20.38■□□□□ 0.85
SHROOM1-204ENST00000440118 KNL1Q8NG31 2342 aa20.38■□□□□ 0.85
SHROOM1-204ENST00000440118 EPG5Q9HCE0 2579 aa20.38■□□□□ 0.85
SHROOM1-204ENST00000440118 SPAARA0A1B0GVQ0 90 aa20.37■□□□□ 0.85
SHROOM1-204ENST00000440118 A0A1B0GVT2 93 aa20.37■□□□□ 0.85
SHROOM1-204ENST00000440118 SMTNL1A8MU46 457 aa20.37■□□□□ 0.85
SHROOM1-204ENST00000440118 C7P10643 843 aa20.37■□□□□ 0.85
SHROOM1-204ENST00000440118 GOT1P17174 413 aa20.37■□□□□ 0.85
SHROOM1-204ENST00000440118 SLC14A1Q13336 389 aa20.37■□□□□ 0.85
SHROOM1-204ENST00000440118 DLG2Q15700 870 aa20.37■□□□□ 0.85
SHROOM1-204ENST00000440118 C5orf22Q49AR2 442 aa20.37■□□□□ 0.85
SHROOM1-204ENST00000440118 FILIP1LQ4L180 1135 aa20.37■□□□□ 0.85
SHROOM1-204ENST00000440118 TRNP1Q6NT89 227 aa20.37■□□□□ 0.85
SHROOM1-204ENST00000440118 Q6ZVU0 165 aa20.37■□□□□ 0.85
SHROOM1-204ENST00000440118 SETD3Q86TU7 594 aaPredicted RBP20.37■□□□□ 0.85
SHROOM1-204ENST00000440118 OR52K2Q8NGK3 314 aa20.37■□□□□ 0.85
SHROOM1-204ENST00000440118 OR2T34Q8NGX1 318 aa20.37■□□□□ 0.85
SHROOM1-204ENST00000440118 RXFP2Q8WXD0 754 aa20.37■□□□□ 0.85
SHROOM1-204ENST00000440118 C1orf74Q96LT6 269 aa20.37■□□□□ 0.85
SHROOM1-204ENST00000440118 ZYG11BQ9C0D3 744 aa20.37■□□□□ 0.85
SHROOM1-204ENST00000440118 TM9SF3Q9HD45 589 aa20.37■□□□□ 0.85
SHROOM1-204ENST00000440118 MAP1BP46821 2468 aaKnown RBP20.37■□□□□ 0.85
SHROOM1-204ENST00000440118 UPK3BL1B0FP48 263 aa20.36■□□□□ 0.85
SHROOM1-204ENST00000440118 UPK3BL2E5RIL1 263 aa20.36■□□□□ 0.85
SHROOM1-204ENST00000440118 I6L893 689 aaPredicted RBP20.36■□□□□ 0.85
SHROOM1-204ENST00000440118 KRT3P12035 628 aa20.36■□□□□ 0.85
SHROOM1-204ENST00000440118 FERP16591 822 aa20.36■□□□□ 0.85
SHROOM1-204ENST00000440118 DESP17661 470 aa20.36■□□□□ 0.85
SHROOM1-204ENST00000440118 GRIA4P48058 902 aa20.36■□□□□ 0.85
SHROOM1-204ENST00000440118 GALCP54803 685 aa20.36■□□□□ 0.85
SHROOM1-204ENST00000440118 C21orf59P57076 290 aa20.36■□□□□ 0.85
SHROOM1-204ENST00000440118 HNRNPDQ14103 355 aaKnown RBP20.36■□□□□ 0.85
SHROOM1-204ENST00000440118 CLEC16AQ2KHT3 1053 aa20.36■□□□□ 0.85
SHROOM1-204ENST00000440118 C15orf59Q2T9L4 293 aaPredicted RBP20.36■□□□□ 0.85
SHROOM1-204ENST00000440118 RWDD4Q6NW29 188 aaKnown RBP20.36■□□□□ 0.85
SHROOM1-204ENST00000440118 NAXDQ8IW45 347 aa20.36■□□□□ 0.85
SHROOM1-204ENST00000440118 SH2D3CQ8N5H7 860 aa20.36■□□□□ 0.85
SHROOM1-204ENST00000440118 AADATQ8N5Z0 425 aa20.36■□□□□ 0.85
SHROOM1-204ENST00000440118 DCAF4L2Q8NA75 395 aa20.36■□□□□ 0.85
SHROOM1-204ENST00000440118 SETD7Q8WTS6 366 aaKnown RBP20.36■□□□□ 0.85
SHROOM1-204ENST00000440118 FAM129BQ96TA1 746 aa20.36■□□□□ 0.85
SHROOM1-204ENST00000440118 SPON2Q9BUD6 331 aa20.36■□□□□ 0.85
SHROOM1-204ENST00000440118 VPS51Q9UID3 782 aa20.36■□□□□ 0.85
SHROOM1-204ENST00000440118 CBX4O00257 560 aa20.35■□□□□ 0.85
SHROOM1-204ENST00000440118 ATP9BO43861 1147 aa20.35■□□□□ 0.85
SHROOM1-204ENST00000440118 SNAP91O60641 907 aa20.35■□□□□ 0.85
SHROOM1-204ENST00000440118 GJB6O95452 261 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms