RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 CEP192Q8TEP8 1941 aa24.67■■□□□ 1.54
CPNE1-217ENST00000439669 CEP250Q9BV73 2442 aa24.66■■□□□ 1.54
CPNE1-217ENST00000439669 MEI4A8MW99 385 aa24.66■■□□□ 1.54
CPNE1-217ENST00000439669 FTLP02792 175 aaPredicted RBP24.66■■□□□ 1.54
CPNE1-217ENST00000439669 KRT83P78385 493 aa24.66■■□□□ 1.54
CPNE1-217ENST00000439669 ZBED6P86452 979 aa24.66■■□□□ 1.54
CPNE1-217ENST00000439669 NFKBIBQ15653 356 aa24.66■■□□□ 1.54
CPNE1-217ENST00000439669 ACCSLQ4AC99 568 aa24.66■■□□□ 1.54
CPNE1-217ENST00000439669 TRIM61Q5EBN2 209 aa24.66■■□□□ 1.54
CPNE1-217ENST00000439669 RWDD4Q6NW29 188 aaKnown RBP24.66■■□□□ 1.54
CPNE1-217ENST00000439669 SCYL2Q6P3W7 929 aa24.66■■□□□ 1.54
CPNE1-217ENST00000439669 RGL4Q8IZJ4 473 aa24.66■■□□□ 1.54
CPNE1-217ENST00000439669 RNF214Q8ND24 703 aa24.66■■□□□ 1.54
CPNE1-217ENST00000439669 GANCQ8TET4 914 aa24.66■■□□□ 1.54
CPNE1-217ENST00000439669 ZNF419Q96HQ0 510 aaPredicted RBP24.66■■□□□ 1.54
CPNE1-217ENST00000439669 CNPY3Q9BT09 278 aa24.66■■□□□ 1.54
CPNE1-217ENST00000439669 C2orf49Q9BVC5 232 aaPredicted RBP24.66■■□□□ 1.54
CPNE1-217ENST00000439669 PARVAQ9NVD7 372 aa24.66■■□□□ 1.54
CPNE1-217ENST00000439669 PPARGC1AQ9UBK2 798 aaKnown RBP24.66■■□□□ 1.54
CPNE1-217ENST00000439669 PILRBQ9UKJ0 227 aa24.66■■□□□ 1.54
CPNE1-217ENST00000439669 CFIP05156 583 aa24.65■■□□□ 1.54
CPNE1-217ENST00000439669 GZMAP12544 262 aa24.65■■□□□ 1.54
CPNE1-217ENST00000439669 MAMLD1Q13495 774 aa24.65■■□□□ 1.54
CPNE1-217ENST00000439669 SYCP2LQ5T4T6 812 aa24.65■■□□□ 1.54
CPNE1-217ENST00000439669 MMAAQ8IVH4 418 aaKnown RBP24.65■■□□□ 1.54
CPNE1-217ENST00000439669 DRC7Q8IY82 874 aa24.65■■□□□ 1.54
CPNE1-217ENST00000439669 STK40Q8N2I9 435 aa24.65■■□□□ 1.54
CPNE1-217ENST00000439669 SYN2Q92777 582 aaPredicted RBP24.65■■□□□ 1.54
CPNE1-217ENST00000439669 NTAN1Q96AB6 310 aa24.65■■□□□ 1.54
CPNE1-217ENST00000439669 ZNF653Q96CK0 615 aa24.65■■□□□ 1.54
CPNE1-217ENST00000439669 PSMB7Q99436 277 aa24.65■■□□□ 1.54
CPNE1-217ENST00000439669 RTKNQ9BST9 563 aa24.65■■□□□ 1.54
CPNE1-217ENST00000439669 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP24.65■■□□□ 1.54
CPNE1-217ENST00000439669 OSBPL2Q9H1P3 480 aa24.65■■□□□ 1.54
CPNE1-217ENST00000439669 CAPN11Q9UMQ6 739 aa24.65■■□□□ 1.54
CPNE1-217ENST00000439669 LUC7L2Q9Y383 392 aaKnown RBP24.65■■□□□ 1.54
CPNE1-217ENST00000439669 BZW2Q9Y6E2 419 aaKnown RBP24.65■■□□□ 1.54
CPNE1-217ENST00000439669 GON4LQ3T8J9 2241 aa24.64■■□□□ 1.54
CPNE1-217ENST00000439669 A0A0D9SEW6 157 aa24.64■■□□□ 1.54
CPNE1-217ENST00000439669 LNP1A1A4G5 178 aa24.64■■□□□ 1.54
CPNE1-217ENST00000439669 SLC30A4O14863 429 aa24.64■■□□□ 1.54
CPNE1-217ENST00000439669 SNAP91O60641 907 aa24.64■■□□□ 1.54
CPNE1-217ENST00000439669 RTN2O75298 545 aa24.64■■□□□ 1.54
CPNE1-217ENST00000439669 PLEKP08567 350 aaPredicted RBP24.64■■□□□ 1.54
CPNE1-217ENST00000439669 VAV1P15498 845 aa24.64■■□□□ 1.54
CPNE1-217ENST00000439669 HOXD12P35452 270 aa24.64■■□□□ 1.54
CPNE1-217ENST00000439669 PSMD8P48556 350 aa24.64■■□□□ 1.54
CPNE1-217ENST00000439669 OGDHQ02218 1023 aa24.64■■□□□ 1.54
CPNE1-217ENST00000439669 NRG1Q02297 640 aaPredicted RBP24.64■■□□□ 1.54
CPNE1-217ENST00000439669 CST6Q15828 149 aa24.64■■□□□ 1.54
CPNE1-217ENST00000439669 EFHC2Q5JST6 749 aa24.64■■□□□ 1.54
CPNE1-217ENST00000439669 WDR45BQ5MNZ6 344 aa24.64■■□□□ 1.54
CPNE1-217ENST00000439669 ARTNQ5T4W7 220 aa24.64■■□□□ 1.54
CPNE1-217ENST00000439669 MANEALQ5VSG8 457 aa24.64■■□□□ 1.54
CPNE1-217ENST00000439669 PLEKHA7Q6IQ23 1121 aa24.64■■□□□ 1.54
CPNE1-217ENST00000439669 DGLUCYQ7Z3D6 616 aa24.64■■□□□ 1.54
CPNE1-217ENST00000439669 TMC6Q7Z403 805 aa24.64■■□□□ 1.54
CPNE1-217ENST00000439669 SLFN11Q7Z7L1 901 aa24.64■■□□□ 1.54
CPNE1-217ENST00000439669 VPS36Q86VN1 386 aa24.64■■□□□ 1.54
CPNE1-217ENST00000439669 DCAF4L2Q8NA75 395 aa24.64■■□□□ 1.54
CPNE1-217ENST00000439669 OR7D4Q8NG98 312 aa24.64■■□□□ 1.54
CPNE1-217ENST00000439669 PTPRN2Q92932 1015 aa24.64■■□□□ 1.54
CPNE1-217ENST00000439669 NUSAP1Q9BXS6 441 aaKnown RBP24.64■■□□□ 1.54
CPNE1-217ENST00000439669 PABPC3Q9H361 631 aaKnown RBP24.64■■□□□ 1.54
CPNE1-217ENST00000439669 CNOT8Q9UFF9 292 aaKnown RBP24.64■■□□□ 1.54
CPNE1-217ENST00000439669 EVLQ9UI08 416 aaPredicted RBP24.64■■□□□ 1.54
CPNE1-217ENST00000439669 VPS51Q9UID3 782 aa24.64■■□□□ 1.54
CPNE1-217ENST00000439669 FAM72CH0Y354 149 aa24.63■■□□□ 1.53
CPNE1-217ENST00000439669 CBFA2T2O43439 604 aa24.63■■□□□ 1.53
CPNE1-217ENST00000439669 LRIG2O94898 1065 aa24.63■■□□□ 1.53
CPNE1-217ENST00000439669 GYPCP04921 128 aa24.63■■□□□ 1.53
CPNE1-217ENST00000439669 C7P10643 843 aa24.63■■□□□ 1.53
CPNE1-217ENST00000439669 PSMA2P25787 234 aa24.63■■□□□ 1.53
CPNE1-217ENST00000439669 IRX4P78413 519 aa24.63■■□□□ 1.53
CPNE1-217ENST00000439669 ELAVL3Q14576 367 aaKnown RBP24.63■■□□□ 1.53
CPNE1-217ENST00000439669 STPG1Q5TH74 334 aa24.63■■□□□ 1.53
CPNE1-217ENST00000439669 FAM72AQ5TYM5 149 aa24.63■■□□□ 1.53
CPNE1-217ENST00000439669 PEAR1Q5VY43 1037 aaPredicted RBP24.63■■□□□ 1.53
CPNE1-217ENST00000439669 HGSNATQ68CP4 663 aa24.63■■□□□ 1.53
CPNE1-217ENST00000439669 FAM72DQ6L9T8 149 aa24.63■■□□□ 1.53
CPNE1-217ENST00000439669 FAM72BQ86X60 149 aa24.63■■□□□ 1.53
CPNE1-217ENST00000439669 CADM4Q8NFZ8 388 aa24.63■■□□□ 1.53
CPNE1-217ENST00000439669 FRS2Q8WU20 508 aa24.63■■□□□ 1.53
CPNE1-217ENST00000439669 TBC1D31Q96DN5 1066 aa24.63■■□□□ 1.53
CPNE1-217ENST00000439669 TRIM11Q96F44 468 aa24.63■■□□□ 1.53
CPNE1-217ENST00000439669 SPON2Q9BUD6 331 aa24.63■■□□□ 1.53
CPNE1-217ENST00000439669 MAGEB5Q9BZ81 275 aa24.63■■□□□ 1.53
CPNE1-217ENST00000439669 BTBD1Q9H0C5 482 aa24.63■■□□□ 1.53
CPNE1-217ENST00000439669 ZNF212Q9UDV6 495 aa24.63■■□□□ 1.53
CPNE1-217ENST00000439669 SCML1Q9UN30 329 aa24.63■■□□□ 1.53
CPNE1-217ENST00000439669 NCKAP1Q9Y2A7 1128 aa24.63■■□□□ 1.53
CPNE1-217ENST00000439669 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP24.63■■□□□ 1.536e-6■□□□□ 9.8
CPNE1-217ENST00000439669 SPTBN4Q9H254 2564 aa24.62■■□□□ 1.53
CPNE1-217ENST00000439669 WDR87Q6ZQQ6 2873 aa24.62■■□□□ 1.53
CPNE1-217ENST00000439669 ILVBLA1L0T0 632 aa24.62■■□□□ 1.53
CPNE1-217ENST00000439669 MID1O15344 667 aa24.62■■□□□ 1.53
CPNE1-217ENST00000439669 ATP9BO43861 1147 aa24.62■■□□□ 1.53
CPNE1-217ENST00000439669 SERPING1P05155 500 aa24.62■■□□□ 1.53
CPNE1-217ENST00000439669 MAOBP27338 520 aa24.62■■□□□ 1.53
CPNE1-217ENST00000439669 ACSL1P33121 698 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms