RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 PRLP01236 227 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 RAG1P15918 1043 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 PORP16435 677 aaPredicted RBP6.48□□□□□ -1.37
BDNF-211ENST00000439476 SLC25A3Q00325 362 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 DPYSL3Q14195 570 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 FASTKD3Q14CZ7 662 aaKnown RBP6.48□□□□□ -1.37
BDNF-211ENST00000439476 TRIM16LQ309B1 348 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 DEPDC1Q5TB30 811 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 STYK1Q6J9G0 422 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 MARK2Q7KZI7 788 aaKnown RBP6.48□□□□□ -1.37
BDNF-211ENST00000439476 WDR49Q8IV35 697 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 HS6ST3Q8IZP7 471 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 ZSWIM2Q8NEG5 633 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 GANCQ8TET4 914 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 BCL7CQ8WUZ0 217 aaPredicted RBP6.48□□□□□ -1.37
BDNF-211ENST00000439476 SEC14L1Q92503 715 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 HDAC2Q92769 488 aaKnown RBP6.48□□□□□ -1.37
BDNF-211ENST00000439476 HPDLQ96IR7 371 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 PRMT6Q96LA8 375 aaPredicted RBP6.48□□□□□ -1.37
BDNF-211ENST00000439476 ECSITQ9BQ95 431 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 POLMQ9NP87 494 aaPredicted RBP6.48□□□□□ -1.37
BDNF-211ENST00000439476 GPATCH2LQ9NWQ4 482 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 UCKL1Q9NWZ5 548 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 TMEM161AQ9NX61 479 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 COPG2Q9UBF2 871 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 HMGXB4Q9UGU5 601 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 EDARQ9UNE0 448 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 ANKRD6Q9Y2G4 727 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 PKP3Q9Y446 797 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 SPEF1Q9Y4P9 236 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 SPATA31A5Q5VU36 1347 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 SPATA31A7Q8IWB4 1347 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 TRDMT1O14717 391 aaKnown RBP6.48□□□□□ -1.37
BDNF-211ENST00000439476 VPS26AO75436 327 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 ITGAVP06756 1048 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 TCF3P15923 654 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 SLC1A6P48664 564 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 ST8SIA6P61647 398 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 MGAT5Q09328 741 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 PRKAA1Q13131 559 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 N4BP2L1Q5TBK1 243 aaPredicted RBP6.48□□□□□ -1.37
BDNF-211ENST00000439476 LRRC38Q5VT99 294 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 PTRHD1Q6GMV3 140 aaKnown RBP6.48□□□□□ -1.37
BDNF-211ENST00000439476 C15orf52Q6ZUT6 534 aaKnown RBP6.48□□□□□ -1.37
BDNF-211ENST00000439476 ALYREFQ86V81 257 aaKnown RBP6.48□□□□□ -1.37
BDNF-211ENST00000439476 AGBL3Q8NEM8 1001 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 CYGBQ8WWM9 190 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 FAM84AQ96KN4 292 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 MTIF3Q9H2K0 278 aaKnown RBP6.48□□□□□ -1.37
BDNF-211ENST00000439476 C12orf65Q9H3J6 166 aaKnown RBP6.48□□□□□ -1.37
BDNF-211ENST00000439476 CLK4Q9HAZ1 481 aaKnown RBP6.48□□□□□ -1.37
BDNF-211ENST00000439476 DMAC2Q9NW81 257 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 CD274Q9NZQ7 290 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 ZNF70Q9UC06 446 aaPredicted RBP6.48□□□□□ -1.37
BDNF-211ENST00000439476 NKX1-2Q9UD57 310 aaPredicted RBP6.48□□□□□ -1.37
BDNF-211ENST00000439476 PIN4Q9Y237 131 aaKnown RBP6.48□□□□□ -1.37
BDNF-211ENST00000439476 LAMA4Q16363 1823 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 MROH7Q68CQ1 1323 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 HACD1B0YJ81 288 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 PRR23D1E9PI22 279 aaPredicted RBP6.48□□□□□ -1.37
BDNF-211ENST00000439476 PEX11AO75192 247 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 FKBP9O95302 570 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 MOCS2O96007 188 aaPredicted RBP6.48□□□□□ -1.37
BDNF-211ENST00000439476 PRR23D2P0DMB1 279 aaPredicted RBP6.48□□□□□ -1.37
BDNF-211ENST00000439476 CHRNB2P17787 502 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 POLR2EP19388 210 aaKnown RBP6.48□□□□□ -1.37
BDNF-211ENST00000439476 AKT1P31749 480 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 PTGS2P35354 604 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 NR2C2P49116 596 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 BCAT1P54687 386 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 NOMO3P69849 1222 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 POU4F1Q01851 419 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 MTMR2Q13614 643 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 SPDYE7PQ495Y7 208 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 SH3D19Q5HYK7 790 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 SHQ1Q6PI26 577 aaKnown RBP6.48□□□□□ -1.37
BDNF-211ENST00000439476 ISLR2Q6UXK2 745 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 FKBP9P1Q75LS8 142 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 SZRD1Q7Z422 152 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 C12orf56Q8IXR9 622 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 CCDC33Q8N5R6 958 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 SLAIN1Q8ND83 568 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 OR6J1Q8NGC5 347 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 SYTL5Q8TDW5 730 aaPredicted RBP6.48□□□□□ -1.37
BDNF-211ENST00000439476 STARD8Q92502 1023 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 CDK5RAP1Q96SZ6 601 aaKnown RBP6.48□□□□□ -1.37
BDNF-211ENST00000439476 VAT1Q99536 393 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 CADM1Q9BY67 442 aaKnown RBP6.48□□□□□ -1.37
BDNF-211ENST00000439476 FAM117AQ9C073 453 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 NEK6Q9HC98 313 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 LATS2Q9NRM7 1088 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 IMPAD1Q9NX62 359 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 CLIC5Q9NZA1 410 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 NOCTQ9UK39 431 aaKnown RBP6.48□□□□□ -1.37
BDNF-211ENST00000439476 DOLKQ9UPQ8 538 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 ERI2A8K979 691 aaKnown RBP6.48□□□□□ -1.37
BDNF-211ENST00000439476 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.48□□□□□ -1.37
BDNF-211ENST00000439476 SUPT3HB4E1H0 165 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 H7C0S8 307 aa6.48□□□□□ -1.37
BDNF-211ENST00000439476 APOC4-APOC2K7ER74 178 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms