RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 TRIM55Q9BYV6 548 aa11.53□□□□□ -0.56
RTN4-211ENST00000438462 DLL4Q9NR61 685 aa11.53□□□□□ -0.56
RTN4-211ENST00000438462 GPR27Q9NS67 375 aa11.53□□□□□ -0.56
RTN4-211ENST00000438462 OSER1Q9NX31 292 aa11.53□□□□□ -0.56
RTN4-211ENST00000438462 ZNF510Q9Y2H8 683 aa11.53□□□□□ -0.56
RTN4-211ENST00000438462 NEU2Q9Y3R4 380 aa11.53□□□□□ -0.56
RTN4-211ENST00000438462 FAM92AA1XBS5 289 aa11.52□□□□□ -0.57
RTN4-211ENST00000438462 SLC7A4O43246 635 aa11.52□□□□□ -0.57
RTN4-211ENST00000438462 NEMFO60524 1076 aa11.52□□□□□ -0.57
RTN4-211ENST00000438462 LRCH4O75427 683 aa11.52□□□□□ -0.57
RTN4-211ENST00000438462 ANXA6P08133 673 aa11.52□□□□□ -0.57
RTN4-211ENST00000438462 FGF3P11487 239 aaPredicted RBP11.52□□□□□ -0.57
RTN4-211ENST00000438462 VAV1P15498 845 aa11.52□□□□□ -0.57
RTN4-211ENST00000438462 POLR2EP19388 210 aaKnown RBP11.52□□□□□ -0.57
RTN4-211ENST00000438462 HNRNPA2B1P22626 353 aaKnown RBP11.52□□□□□ -0.57
RTN4-211ENST00000438462 MZF1P28698 734 aaPredicted RBP11.52□□□□□ -0.57
RTN4-211ENST00000438462 CORO1AP31146 461 aaKnown RBP11.52□□□□□ -0.57
RTN4-211ENST00000438462 PLA2G4AP47712 749 aa11.52□□□□□ -0.57
RTN4-211ENST00000438462 ADKP55263 362 aaKnown RBP11.52□□□□□ -0.57
RTN4-211ENST00000438462 ST8SIA6P61647 398 aa11.52□□□□□ -0.57
RTN4-211ENST00000438462 FOXD4Q12950 439 aaPredicted RBP11.52□□□□□ -0.57
RTN4-211ENST00000438462 TMEM198Q66K66 360 aa11.52□□□□□ -0.57
RTN4-211ENST00000438462 SLC6A19Q695T7 634 aa11.52□□□□□ -0.57
RTN4-211ENST00000438462 NAGSQ8N159 534 aa11.52□□□□□ -0.57
RTN4-211ENST00000438462 STK40Q8N2I9 435 aa11.52□□□□□ -0.57
RTN4-211ENST00000438462 Q8N9G6 341 aaPredicted RBP11.52□□□□□ -0.57
RTN4-211ENST00000438462 C1orf127Q8N9H9 656 aa11.52□□□□□ -0.57
RTN4-211ENST00000438462 FAM129BQ96TA1 746 aa11.52□□□□□ -0.57
RTN4-211ENST00000438462 TCEAL2Q9H3H9 227 aaPredicted RBP11.52□□□□□ -0.57
RTN4-211ENST00000438462 C17orf75Q9HAS0 396 aa11.52□□□□□ -0.57
RTN4-211ENST00000438462 CHST11Q9NPF2 352 aa11.52□□□□□ -0.57
RTN4-211ENST00000438462 TLR8Q9NR97 1041 aaKnown RBP11.52□□□□□ -0.57
RTN4-211ENST00000438462 IL37Q9NZH6 218 aa11.52□□□□□ -0.57
RTN4-211ENST00000438462 SPASTQ9UBP0 616 aa11.52□□□□□ -0.57
RTN4-211ENST00000438462 PILRAQ9UKJ1 303 aa11.52□□□□□ -0.57
RTN4-211ENST00000438462 AGO1Q9UL18 857 aaKnown RBP11.52□□□□□ -0.57
RTN4-211ENST00000438462 SPTY2D1-AS1A0A0U1RR47 76 aa11.51□□□□□ -0.57
RTN4-211ENST00000438462 A6NCN8 305 aa11.51□□□□□ -0.57
RTN4-211ENST00000438462 LMO7DNF2Z398 122 aa11.51□□□□□ -0.57
RTN4-211ENST00000438462 F9P00740 461 aa11.51□□□□□ -0.57
RTN4-211ENST00000438462 HMBSP08397 361 aa11.51□□□□□ -0.57
RTN4-211ENST00000438462 PTPN1P18031 435 aaKnown RBP11.51□□□□□ -0.57
RTN4-211ENST00000438462 PRRT3Q5FWE3 981 aa11.51□□□□□ -0.57
RTN4-211ENST00000438462 VWA2Q5GFL6 755 aa11.51□□□□□ -0.57
RTN4-211ENST00000438462 AGBL4Q5VU57 503 aa11.51□□□□□ -0.57
RTN4-211ENST00000438462 LINGO4Q6UY18 593 aa11.51□□□□□ -0.57
RTN4-211ENST00000438462 KIAA0907Q7Z7F0 614 aaPredicted RBP11.51□□□□□ -0.57
RTN4-211ENST00000438462 CPXM2Q8N436 756 aa11.51□□□□□ -0.57
RTN4-211ENST00000438462 LRRC52Q8N7C0 313 aa11.51□□□□□ -0.57
RTN4-211ENST00000438462 RCBTB1Q8NDN9 531 aa11.51□□□□□ -0.57
RTN4-211ENST00000438462 ART4Q93070 314 aa11.51□□□□□ -0.57
RTN4-211ENST00000438462 FAM84AQ96KN4 292 aa11.51□□□□□ -0.57
RTN4-211ENST00000438462 NTPCRQ9BSD7 190 aaKnown RBP11.51□□□□□ -0.57
RTN4-211ENST00000438462 SLC25A23Q9BV35 468 aa11.51□□□□□ -0.57
RTN4-211ENST00000438462 RUSC1Q9BVN2 902 aa11.51□□□□□ -0.57
RTN4-211ENST00000438462 DDA1Q9BW61 102 aa11.51□□□□□ -0.57
RTN4-211ENST00000438462 APOBEC3BQ9UH17 382 aaKnown RBP11.51□□□□□ -0.57
RTN4-211ENST00000438462 NAALADL1Q9UQQ1 740 aa11.51□□□□□ -0.57
RTN4-211ENST00000438462 NME7Q9Y5B8 376 aa11.51□□□□□ -0.57
RTN4-211ENST00000438462 A0A1W2PQU0 124 aa11.5□□□□□ -0.57
RTN4-211ENST00000438462 ZSCAN5CA6NGD5 496 aaPredicted RBP11.5□□□□□ -0.57
RTN4-211ENST00000438462 YY2O15391 372 aa11.5□□□□□ -0.57
RTN4-211ENST00000438462 OR52Z1P0C646 297 aa11.5□□□□□ -0.57
RTN4-211ENST00000438462 MAP4P27816 1152 aaKnown RBP11.5□□□□□ -0.57
RTN4-211ENST00000438462 HTR1EP28566 365 aa11.5□□□□□ -0.57
RTN4-211ENST00000438462 ITGA1P56199 1179 aa11.5□□□□□ -0.57
RTN4-211ENST00000438462 TFAMQ00059 246 aaKnown RBP11.5□□□□□ -0.57
RTN4-211ENST00000438462 ERV3-1Q14264 604 aa11.5□□□□□ -0.57
RTN4-211ENST00000438462 MAP9Q49MG5 647 aa11.5□□□□□ -0.57
RTN4-211ENST00000438462 C10orf120Q5SQS8 335 aa11.5□□□□□ -0.57
RTN4-211ENST00000438462 B4GALNT3Q6L9W6 998 aa11.5□□□□□ -0.57
RTN4-211ENST00000438462 KDELC2Q7Z4H8 507 aa11.5□□□□□ -0.57
RTN4-211ENST00000438462 DCP2Q8IU60 420 aaKnown RBP11.5□□□□□ -0.57
RTN4-211ENST00000438462 DENND1CQ8IV53 801 aa11.5□□□□□ -0.57
RTN4-211ENST00000438462 TRIM22Q8IYM9 498 aa11.5□□□□□ -0.57
RTN4-211ENST00000438462 CHDHQ8NE62 594 aaPredicted RBP11.5□□□□□ -0.57
RTN4-211ENST00000438462 ERMNQ8TAM6 284 aa11.5□□□□□ -0.57
RTN4-211ENST00000438462 WFDC5Q8TCV5 224 aa11.5□□□□□ -0.57
RTN4-211ENST00000438462 CENPTQ96BT3 561 aa11.5□□□□□ -0.57
RTN4-211ENST00000438462 MRGPRX3Q96LB0 322 aa11.5□□□□□ -0.57
RTN4-211ENST00000438462 LRRC61Q9BV99 259 aa11.5□□□□□ -0.57
RTN4-211ENST00000438462 NCOA5Q9HCD5 579 aaKnown RBP11.5□□□□□ -0.57
RTN4-211ENST00000438462 MRPL40Q9NQ50 206 aaKnown RBP11.5□□□□□ -0.57
RTN4-211ENST00000438462 FOXD4L1Q9NU39 408 aa11.5□□□□□ -0.57
RTN4-211ENST00000438462 PCDHB3Q9Y5E6 796 aa11.5□□□□□ -0.57
RTN4-211ENST00000438462 EDDM13A0A1B0GTR0 161 aa11.49□□□□□ -0.57
RTN4-211ENST00000438462 TTC34A8MYJ7 566 aa11.49□□□□□ -0.57
RTN4-211ENST00000438462 TULP1O00294 542 aaPredicted RBP11.49□□□□□ -0.57
RTN4-211ENST00000438462 WNT7AO00755 349 aa11.49□□□□□ -0.57
RTN4-211ENST00000438462 KCNN4O15554 427 aa11.49□□□□□ -0.57
RTN4-211ENST00000438462 KRT19P08727 400 aa11.49□□□□□ -0.57
RTN4-211ENST00000438462 GSPT1P15170 499 aaKnown RBP11.49□□□□□ -0.57
RTN4-211ENST00000438462 WARSP23381 471 aaKnown RBP11.49□□□□□ -0.57
RTN4-211ENST00000438462 CD70P32970 193 aa11.49□□□□□ -0.57
RTN4-211ENST00000438462 SMTNP53814 917 aa11.49□□□□□ -0.57
RTN4-211ENST00000438462 ABHD18Q0P651 414 aa11.49□□□□□ -0.57
RTN4-211ENST00000438462 ZNF284Q2VY69 593 aa11.49□□□□□ -0.57
RTN4-211ENST00000438462 TPRG1LQ5T0D9 272 aa11.49□□□□□ -0.57
RTN4-211ENST00000438462 RINT1Q6NUQ1 792 aa11.49□□□□□ -0.57
RTN4-211ENST00000438462 SLC39A4Q6P5W5 647 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms